RNA–Protein interactions for RNA: ENST00000556078.1

EFCAB11-210, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3

Gene EFCAB11, Length 449 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-210ENST00000556078 SERPINB2P05120 415 aa4.06□□□□□ -1.76
EFCAB11-210ENST00000556078 ZNF888P0CJ79 500 aaPredicted RBP4.06□□□□□ -1.76
EFCAB11-210ENST00000556078 MRPL58Q14197 206 aaKnown RBP4.06□□□□□ -1.76
EFCAB11-210ENST00000556078 RNF151Q2KHN1 245 aa4.06□□□□□ -1.76
EFCAB11-210ENST00000556078 PHF19Q5T6S3 580 aa4.06□□□□□ -1.76
EFCAB11-210ENST00000556078 NBPF6Q5VWK0 638 aa4.06□□□□□ -1.76
EFCAB11-210ENST00000556078 ZKSCAN2Q63HK3 967 aa4.06□□□□□ -1.76
EFCAB11-210ENST00000556078 GTF2IRD2BQ6EKJ0 949 aa4.06□□□□□ -1.76
EFCAB11-210ENST00000556078 USP50Q70EL3 339 aaPredicted RBP4.06□□□□□ -1.76
EFCAB11-210ENST00000556078 GTF2IRD2Q86UP8 949 aa4.06□□□□□ -1.76
EFCAB11-210ENST00000556078 VPS37DQ86XT2 251 aa4.06□□□□□ -1.76
EFCAB11-210ENST00000556078 MAFAQ8NHW3 353 aaPredicted RBP4.06□□□□□ -1.76
EFCAB11-210ENST00000556078 NBPF4Q96M43 638 aa4.06□□□□□ -1.76
EFCAB11-210ENST00000556078 DNAJC2Q99543 621 aaKnown RBP4.06□□□□□ -1.76
EFCAB11-210ENST00000556078 GDF15Q99988 308 aa4.06□□□□□ -1.76
EFCAB11-210ENST00000556078 DPYSL5Q9BPU6 564 aa4.06□□□□□ -1.76
EFCAB11-210ENST00000556078 TTPALQ9BTX7 342 aa4.06□□□□□ -1.76
EFCAB11-210ENST00000556078 EPB41L1Q9H4G0 881 aa4.06□□□□□ -1.76
EFCAB11-210ENST00000556078 ASH2LQ9UBL3 628 aa4.06□□□□□ -1.76
EFCAB11-210ENST00000556078 PGAP2Q9UHJ9 254 aa4.06□□□□□ -1.76
EFCAB11-210ENST00000556078 ZFP69BQ9UJL9 534 aa4.06□□□□□ -1.76
EFCAB11-210ENST00000556078 FBXL7Q9UJT9 491 aa4.06□□□□□ -1.76
EFCAB11-210ENST00000556078 DMXL1Q9Y485 3027 aa4.05□□□□□ -1.76
EFCAB11-210ENST00000556078 CD163L1Q9NR16 1453 aa4.05□□□□□ -1.76
EFCAB11-210ENST00000556078 ZNF609O15014 1411 aa4.05□□□□□ -1.76
EFCAB11-210ENST00000556078 SMG6Q86US8 1419 aaKnown RBP4.05□□□□□ -1.76
EFCAB11-210ENST00000556078 DNAH14Q0VDD8 3507 aa4.05□□□□□ -1.76
EFCAB11-210ENST00000556078 ADM5C9JUS6 153 aa4.05□□□□□ -1.76
EFCAB11-210ENST00000556078 CDC14BO60729 498 aa4.05□□□□□ -1.76
EFCAB11-210ENST00000556078 CUTAO60888 179 aa4.05□□□□□ -1.76
EFCAB11-210ENST00000556078 CKMP06732 381 aa4.05□□□□□ -1.76
EFCAB11-210ENST00000556078 CANXP27824 592 aaKnown RBP4.05□□□□□ -1.76
EFCAB11-210ENST00000556078 HIBADHP31937 336 aaKnown RBP4.05□□□□□ -1.76
EFCAB11-210ENST00000556078 LSAMPQ13449 338 aa4.05□□□□□ -1.76
EFCAB11-210ENST00000556078 SKIDA1Q1XH10 827 aa4.05□□□□□ -1.76
EFCAB11-210ENST00000556078 LRIT3Q3SXY7 679 aa4.05□□□□□ -1.76
EFCAB11-210ENST00000556078 MOB2Q70IA6 237 aa4.05□□□□□ -1.76
EFCAB11-210ENST00000556078 TRIM59Q8IWR1 403 aa4.05□□□□□ -1.76
EFCAB11-210ENST00000556078 OR14A2Q96R54 314 aa4.05□□□□□ -1.76
EFCAB11-210ENST00000556078 PLA2G12BQ9BX93 195 aa4.05□□□□□ -1.76
EFCAB11-210ENST00000556078 EPHX3Q9H6B9 360 aa4.05□□□□□ -1.76
EFCAB11-210ENST00000556078 SLC2A4RGQ9NR83 387 aa4.05□□□□□ -1.76
EFCAB11-210ENST00000556078 INPP5FQ9Y2H2 1132 aa4.05□□□□□ -1.76
EFCAB11-210ENST00000556078 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.05□□□□□ -1.76
EFCAB11-210ENST00000556078 SCN7AQ01118 1682 aa4.05□□□□□ -1.76
EFCAB11-210ENST00000556078 VPS13AQ96RL7 3174 aa4.05□□□□□ -1.76
EFCAB11-210ENST00000556078 COL2A1P02458 1487 aaPredicted RBP4.05□□□□□ -1.76
EFCAB11-210ENST00000556078 CHD9Q3L8U1 2897 aa4.04□□□□□ -1.76
EFCAB11-210ENST00000556078 MATN2O00339 956 aa4.04□□□□□ -1.76
EFCAB11-210ENST00000556078 NOP56O00567 594 aaKnown RBP4.04□□□□□ -1.76
EFCAB11-210ENST00000556078 IARSP41252 1262 aaKnown RBP4.04□□□□□ -1.76
EFCAB11-210ENST00000556078 CRKLP46109 303 aaKnown RBP4.04□□□□□ -1.76
EFCAB11-210ENST00000556078 ZNF143P52747 638 aaPredicted RBP4.04□□□□□ -1.76
EFCAB11-210ENST00000556078 NFYCQ13952 458 aa4.04□□□□□ -1.76
EFCAB11-210ENST00000556078 KCTD2Q14681 263 aa4.04□□□□□ -1.76
EFCAB11-210ENST00000556078 ZMAT1Q5H9K5 638 aa4.04□□□□□ -1.76
EFCAB11-210ENST00000556078 EPHA10Q5JZY3 1008 aa4.04□□□□□ -1.76
EFCAB11-210ENST00000556078 ACBD5Q5T8D3 534 aaPredicted RBP4.04□□□□□ -1.76
EFCAB11-210ENST00000556078 DPH6Q7L8W6 267 aa4.04□□□□□ -1.76
EFCAB11-210ENST00000556078 PRIMA1Q86XR5 153 aa4.04□□□□□ -1.76
EFCAB11-210ENST00000556078 NME9Q86XW9 330 aa4.04□□□□□ -1.76
EFCAB11-210ENST00000556078 TMPRSS6Q8IU80 811 aa4.04□□□□□ -1.76
EFCAB11-210ENST00000556078 STPG3Q8N7X2 389 aa4.04□□□□□ -1.76
EFCAB11-210ENST00000556078 RCBTB1Q8NDN9 531 aa4.04□□□□□ -1.76
EFCAB11-210ENST00000556078 CD99L2Q8TCZ2 262 aa4.04□□□□□ -1.76
EFCAB11-210ENST00000556078 ZNF764Q96H86 408 aaPredicted RBP4.04□□□□□ -1.76
EFCAB11-210ENST00000556078 MRGPRX3Q96LB0 322 aa4.04□□□□□ -1.76
EFCAB11-210ENST00000556078 CRBNQ96SW2 442 aa4.04□□□□□ -1.76
EFCAB11-210ENST00000556078 CDX2Q99626 313 aaPredicted RBP4.04□□□□□ -1.76
EFCAB11-210ENST00000556078 APBA2Q99767 749 aa4.04□□□□□ -1.76
EFCAB11-210ENST00000556078 TGIF2Q9GZN2 237 aa4.04□□□□□ -1.76
EFCAB11-210ENST00000556078 ACBD3Q9H3P7 528 aa4.04□□□□□ -1.76
EFCAB11-210ENST00000556078 GBA2Q9HCG7 927 aaPredicted RBP4.04□□□□□ -1.76
EFCAB11-210ENST00000556078 TLR9Q9NR96 1032 aa4.04□□□□□ -1.76
EFCAB11-210ENST00000556078 METTL5Q9NRN9 209 aaKnown RBP4.04□□□□□ -1.76
EFCAB11-210ENST00000556078 PARPBPQ9NWS1 579 aa4.04□□□□□ -1.76
EFCAB11-210ENST00000556078 GPRC5DQ9NZD1 345 aa4.04□□□□□ -1.76
EFCAB11-210ENST00000556078 ARHGAP20Q9P2F6 1191 aa4.04□□□□□ -1.76
EFCAB11-210ENST00000556078 REXO2Q9Y3B8 237 aaKnown RBP4.04□□□□□ -1.76
EFCAB11-210ENST00000556078 CHD7Q9P2D1 2997 aa4.03□□□□□ -1.76
EFCAB11-210ENST00000556078 TTC21AQ8NDW8 1320 aa4.03□□□□□ -1.76
EFCAB11-210ENST00000556078 ZDBF2Q9HCK1 2354 aa4.03□□□□□ -1.76
EFCAB11-210ENST00000556078 DMDP11532 3685 aa4.03□□□□□ -1.76
EFCAB11-210ENST00000556078 KRTAP23-1A1A580 65 aa4.03□□□□□ -1.76
EFCAB11-210ENST00000556078 KRIT1O00522 736 aa4.03□□□□□ -1.76
EFCAB11-210ENST00000556078 MEFVO15553 781 aaPredicted RBP4.03□□□□□ -1.76
EFCAB11-210ENST00000556078 SCG5P05408 212 aa4.03□□□□□ -1.76
EFCAB11-210ENST00000556078 NCLP19338 710 aaKnown RBP4.03□□□□□ -1.76
EFCAB11-210ENST00000556078 FANCCQ00597 558 aa4.03□□□□□ -1.76
EFCAB11-210ENST00000556078 FOXL1Q12952 345 aa4.03□□□□□ -1.76
EFCAB11-210ENST00000556078 TOP3AQ13472 1001 aaPredicted RBP4.03□□□□□ -1.76
EFCAB11-210ENST00000556078 COL9A2Q14055 689 aaPredicted RBP4.03□□□□□ -1.76
EFCAB11-210ENST00000556078 SLC4A8Q2Y0W8 1093 aa4.03□□□□□ -1.76
EFCAB11-210ENST00000556078 LAIR1Q6GTX8 287 aa4.03□□□□□ -1.76
EFCAB11-210ENST00000556078 KREMEN2Q8NCW0 462 aa4.03□□□□□ -1.76
EFCAB11-210ENST00000556078 OR6P1Q8NGX9 317 aa4.03□□□□□ -1.76
EFCAB11-210ENST00000556078 SH3TC2Q8TF17 1288 aa4.03□□□□□ -1.76
EFCAB11-210ENST00000556078 IP6K1Q92551 441 aa4.03□□□□□ -1.76
EFCAB11-210ENST00000556078 SPATA32Q96LK8 384 aa4.03□□□□□ -1.76
EFCAB11-210ENST00000556078 ADARB2Q9NS39 739 aaKnown RBP4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms