RNA–Protein interactions for RNA: ENST00000556029.5

TMPO-212, Transcript of thymopoietin, human

TSL 1 (best) BASIC

Gene TMPO, Length 4,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMPO-212	ENST00000556029	MCTP2	Q6DN12	878 aa		13.18	□□□□□ -0.3
TMPO-212	ENST00000556029	INPP4A	Q96PE3	977 aa	Predicted RBP	13.18	□□□□□ -0.3
TMPO-212	ENST00000556029	KCNMB3	Q9NPA1	279 aa		13.18	□□□□□ -0.3
TMPO-212	ENST00000556029	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	13.18	□□□□□ -0.3
TMPO-212	ENST00000556029	MYH10	P35580	1976 aa		13.18	□□□□□ -0.3
TMPO-212	ENST00000556029	CASQ2	O14958	399 aa	Predicted RBP	13.18	□□□□□ -0.3
TMPO-212	ENST00000556029	RPA1	P27694	616 aa		13.18	□□□□□ -0.3
TMPO-212	ENST00000556029	TBC1D1	Q86TI0	1168 aa	Predicted RBP	13.18	□□□□□ -0.3
TMPO-212	ENST00000556029	SYT2	Q8N9I0	419 aa	Predicted RBP	13.18	□□□□□ -0.3
TMPO-212	ENST00000556029	WDR11	Q9BZH6	1224 aa		13.18	□□□□□ -0.3
TMPO-212	ENST00000556029	ISCU	Q9H1K1	167 aa		13.18	□□□□□ -0.3
TMPO-212	ENST00000556029	RNF146	Q9NTX7	359 aa		13.18	□□□□□ -0.3
TMPO-212	ENST00000556029	FZD1	Q9UP38	647 aa		13.18	□□□□□ -0.3
TMPO-212	ENST00000556029	MAST2	Q6P0Q8	1798 aa		13.18	□□□□□ -0.3
TMPO-212	ENST00000556029	IGKV6D-41	A0A0C4DH26	115 aa		13.17	□□□□□ -0.3
TMPO-212	ENST00000556029		H0Y3Z8	333 aa		13.17	□□□□□ -0.3
TMPO-212	ENST00000556029	HNRNPDL	O14979	420 aa	Known RBP	13.17	□□□□□ -0.3
TMPO-212	ENST00000556029	AKAP3	O75969	853 aa		13.17	□□□□□ -0.3
TMPO-212	ENST00000556029	TROVE2	P10155	538 aa	Known RBP eCLIP	13.17	□□□□□ -0.3
TMPO-212	ENST00000556029	LSP1	P33241	339 aa		13.17	□□□□□ -0.3
TMPO-212	ENST00000556029	PSMC2	P35998	433 aa	Known RBP	13.17	□□□□□ -0.3
TMPO-212	ENST00000556029	CASP4	P49662	377 aa		13.17	□□□□□ -0.3
TMPO-212	ENST00000556029	POLG	P54098	1239 aa	Predicted RBP	13.17	□□□□□ -0.3
TMPO-212	ENST00000556029	SKOR1	P84550	965 aa		13.17	□□□□□ -0.3
TMPO-212	ENST00000556029	OR2W6P	Q8NHA6	318 aa		13.17	□□□□□ -0.3
TMPO-212	ENST00000556029	NACC1	Q96RE7	527 aa		13.17	□□□□□ -0.3
TMPO-212	ENST00000556029	PLCB1	Q9NQ66	1216 aa		13.17	□□□□□ -0.3
TMPO-212	ENST00000556029	AMACR	Q9UHK6	382 aa		13.17	□□□□□ -0.3
TMPO-212	ENST00000556029	SHROOM1	Q2M3G4	852 aa	Predicted RBP	13.17	□□□□□ -0.3
TMPO-212	ENST00000556029	ZNF449	Q6P9G9	518 aa		13.17	□□□□□ -0.3
TMPO-212	ENST00000556029	KDM7A	Q6ZMT4	941 aa		13.17	□□□□□ -0.3
TMPO-212	ENST00000556029	HIPK4	Q8NE63	616 aa		13.17	□□□□□ -0.3
TMPO-212	ENST00000556029	RSAD2	Q8WXG1	361 aa		13.17	□□□□□ -0.3
TMPO-212	ENST00000556029	POMGNT1	Q8WZA1	660 aa		13.17	□□□□□ -0.3
TMPO-212	ENST00000556029	OTUD5	Q96G74	571 aa		13.17	□□□□□ -0.3
TMPO-212	ENST00000556029	PCDHA2	Q9Y5H9	948 aa		13.17	□□□□□ -0.3
TMPO-212	ENST00000556029	PLIN4	Q96Q06	1357 aa		13.17	□□□□□ -0.3
TMPO-212	ENST00000556029	NAV1	Q8NEY1	1877 aa		13.17	□□□□□ -0.3
TMPO-212	ENST00000556029	CCDC188	H7C350	402 aa		13.17	□□□□□ -0.3
TMPO-212	ENST00000556029	CXCL9	Q07325	125 aa		13.17	□□□□□ -0.3
TMPO-212	ENST00000556029	APOBEC3H	Q6NTF7	200 aa	Known RBP	13.17	□□□□□ -0.3
TMPO-212	ENST00000556029	IQCK	Q8N0W5	287 aa		13.17	□□□□□ -0.3
TMPO-212	ENST00000556029	PRPF38A	Q8NAV1	312 aa	Known RBP	13.17	□□□□□ -0.3
TMPO-212	ENST00000556029	TPCN2	Q8NHX9	752 aa		13.17	□□□□□ -0.3
TMPO-212	ENST00000556029	GDAP1	Q8TB36	358 aa		13.17	□□□□□ -0.3
TMPO-212	ENST00000556029	MORC4	Q8TE76	937 aa		13.17	□□□□□ -0.3
TMPO-212	ENST00000556029	AGBL1	Q96MI9	1066 aa		13.17	□□□□□ -0.3
TMPO-212	ENST00000556029	FAM20A	Q96MK3	541 aa		13.17	□□□□□ -0.3
TMPO-212	ENST00000556029	TRAF3IP3	Q9Y228	551 aa		13.17	□□□□□ -0.3
TMPO-212	ENST00000556029	SLC26A4	O43511	780 aa		13.16	□□□□□ -0.3
TMPO-212	ENST00000556029	PPP1R37	O75864	691 aa		13.16	□□□□□ -0.3
TMPO-212	ENST00000556029	NOV	P48745	357 aa		13.16	□□□□□ -0.3
TMPO-212	ENST00000556029	TAF12	Q16514	161 aa		13.16	□□□□□ -0.3
TMPO-212	ENST00000556029	IRF2BP2	Q7Z5L9	587 aa		13.16	□□□□□ -0.3
TMPO-212	ENST00000556029	RPAP3	Q9H6T3	665 aa	Predicted RBP	13.16	□□□□□ -0.3
TMPO-212	ENST00000556029	SMYD2	Q9NRG4	433 aa		13.16	□□□□□ -0.3
TMPO-212	ENST00000556029	EXOC7	Q9UPT5	735 aa		13.16	□□□□□ -0.3
TMPO-212	ENST00000556029	GAP43	P17677	238 aa		13.16	□□□□□ -0.3
TMPO-212	ENST00000556029	SERPINB6	P35237	376 aa		13.16	□□□□□ -0.3
TMPO-212	ENST00000556029	LIG4	P49917	911 aa		13.16	□□□□□ -0.3
TMPO-212	ENST00000556029	PEX3	P56589	373 aa		13.16	□□□□□ -0.3
TMPO-212	ENST00000556029	ERVK-9	P63128	1117 aa		13.16	□□□□□ -0.3
TMPO-212	ENST00000556029	IRX4	P78413	519 aa		13.16	□□□□□ -0.3
TMPO-212	ENST00000556029	ACTN3	Q08043	901 aa	Predicted RBP	13.16	□□□□□ -0.3
TMPO-212	ENST00000556029	MTMR1	Q13613	665 aa		13.16	□□□□□ -0.3
TMPO-212	ENST00000556029	SNCB	Q16143	134 aa		13.16	□□□□□ -0.3
TMPO-212	ENST00000556029	SPATS2	Q86XZ4	545 aa	Known RBP	13.16	□□□□□ -0.3
TMPO-212	ENST00000556029	MCU	Q8NE86	351 aa		13.16	□□□□□ -0.3
TMPO-212	ENST00000556029	FAM151A	Q8WW52	585 aa		13.16	□□□□□ -0.3
TMPO-212	ENST00000556029	EIF2AK1	Q9BQI3	630 aa	Known RBP	13.16	□□□□□ -0.3
TMPO-212	ENST00000556029	EPN3	Q9H201	632 aa		13.16	□□□□□ -0.3
TMPO-212	ENST00000556029	PARVG	Q9HBI0	331 aa		13.16	□□□□□ -0.3
TMPO-212	ENST00000556029	NYAP2	Q9P242	653 aa		13.16	□□□□□ -0.3
TMPO-212	ENST00000556029	GOLGA4	Q13439	2230 aa	Known RBP	13.16	□□□□□ -0.3
TMPO-212	ENST00000556029	IPO5	O00410	1097 aa	Known RBP	13.16	□□□□□ -0.3
TMPO-212	ENST00000556029	KIF3C	O14782	793 aa		13.16	□□□□□ -0.3
TMPO-212	ENST00000556029	GIPC1	O14908	333 aa		13.16	□□□□□ -0.3
TMPO-212	ENST00000556029	SMIM24	O75264	130 aa		13.16	□□□□□ -0.3
TMPO-212	ENST00000556029	FGG	P02679	453 aa		13.16	□□□□□ -0.3
TMPO-212	ENST00000556029	LMNB1	P20700	586 aa		13.16	□□□□□ -0.3
TMPO-212	ENST00000556029	HOXA10	P31260	410 aa	Predicted RBP	13.16	□□□□□ -0.3
TMPO-212	ENST00000556029	CRY2	Q49AN0	593 aa		13.16	□□□□□ -0.3
TMPO-212	ENST00000556029	GLYCTK	Q8IVS8	523 aa		13.16	□□□□□ -0.3
TMPO-212	ENST00000556029	AKT1S1	Q96B36	256 aa		13.16	□□□□□ -0.3
TMPO-212	ENST00000556029	ZDHHC15	Q96MV8	337 aa		13.16	□□□□□ -0.3
TMPO-212	ENST00000556029	RUSC1	Q9BVN2	902 aa		13.16	□□□□□ -0.3
TMPO-212	ENST00000556029	DEFB129	Q9H1M3	183 aa		13.16	□□□□□ -0.3
TMPO-212	ENST00000556029	MYOZ2	Q9NPC6	264 aa		13.16	□□□□□ -0.3
TMPO-212	ENST00000556029	NMT1	P30419	496 aa	Known RBP	13.15	□□□□□ -0.3
TMPO-212	ENST00000556029	HSD17B3	P37058	310 aa		13.15	□□□□□ -0.3
TMPO-212	ENST00000556029	MDH1	P40925	334 aa	Known RBP	13.15	□□□□□ -0.3
TMPO-212	ENST00000556029	SEC24C	P53992	1094 aa		13.15	□□□□□ -0.3
TMPO-212	ENST00000556029	POLE2	P56282	527 aa		13.15	□□□□□ -0.3
TMPO-212	ENST00000556029	IFRD2	Q12894	506 aa	Predicted RBP	13.15	□□□□□ -0.3
TMPO-212	ENST00000556029	FOXD4	Q12950	439 aa	Predicted RBP	13.15	□□□□□ -0.3
TMPO-212	ENST00000556029	ARHGAP24	Q8N264	748 aa		13.15	□□□□□ -0.3
TMPO-212	ENST00000556029	ZKSCAN4	Q969J2	545 aa	Predicted RBP	13.15	□□□□□ -0.3
TMPO-212	ENST00000556029	GGA3	Q9NZ52	723 aa		13.15	□□□□□ -0.3
TMPO-212	ENST00000556029	FBXL5	Q9UKA1	691 aa		13.15	□□□□□ -0.3
TMPO-212	ENST00000556029	DNAJC12	Q9UKB3	198 aa		13.15	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 43 ms