RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 DSC1Q08554 894 aa8.65□□□□□ -1.02
PTCSC3-201ENST00000556013 PTPN14Q15678 1187 aa8.65□□□□□ -1.02
PTCSC3-201ENST00000556013 FAM187BQ17R55 369 aa8.65□□□□□ -1.02
PTCSC3-201ENST00000556013 GPR149Q86SP6 731 aa8.65□□□□□ -1.02
PTCSC3-201ENST00000556013 TMEM173Q86WV6 379 aaPredicted RBP8.65□□□□□ -1.02
PTCSC3-201ENST00000556013 SUGP1Q8IWZ8 645 aaKnown RBP8.65□□□□□ -1.02
PTCSC3-201ENST00000556013 COLGALT2Q8IYK4 626 aa8.65□□□□□ -1.02
PTCSC3-201ENST00000556013 RNF168Q8IYW5 571 aaPredicted RBP8.65□□□□□ -1.02
PTCSC3-201ENST00000556013 NECAB1Q8N987 351 aa8.65□□□□□ -1.02
PTCSC3-201ENST00000556013 SMG8Q8ND04 991 aaKnown RBP8.65□□□□□ -1.02
PTCSC3-201ENST00000556013 MCPH1Q8NEM0 835 aa8.65□□□□□ -1.02
PTCSC3-201ENST00000556013 ASIC4Q96FT7 647 aa8.65□□□□□ -1.02
PTCSC3-201ENST00000556013 ZSCAN31Q96LW9 406 aaPredicted RBP8.65□□□□□ -1.02
PTCSC3-201ENST00000556013 KLHL5Q96PQ7 755 aa8.65□□□□□ -1.02
PTCSC3-201ENST00000556013 COLEC11Q9BWP8 271 aa8.65□□□□□ -1.02
PTCSC3-201ENST00000556013 FOXP1Q9H334 677 aaPredicted RBP8.65□□□□□ -1.02
PTCSC3-201ENST00000556013 RXFP1Q9HBX9 757 aa8.65□□□□□ -1.02
PTCSC3-201ENST00000556013 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.65□□□□□ -1.02
PTCSC3-201ENST00000556013 MRPL17Q9NRX2 175 aaKnown RBP8.65□□□□□ -1.02
PTCSC3-201ENST00000556013 CHST7Q9NS84 486 aa8.65□□□□□ -1.02
PTCSC3-201ENST00000556013 PRMT7Q9NVM4 692 aaPredicted RBP8.65□□□□□ -1.02
PTCSC3-201ENST00000556013 DBR1Q9UK59 544 aaKnown RBP8.65□□□□□ -1.02
PTCSC3-201ENST00000556013 LIMCH1Q9UPQ0 1083 aa8.65□□□□□ -1.02
PTCSC3-201ENST00000556013 SORCS3Q9UPU3 1222 aa8.65□□□□□ -1.02
PTCSC3-201ENST00000556013 INPP5FQ9Y2H2 1132 aa8.65□□□□□ -1.02
PTCSC3-201ENST00000556013 IPPQ9Y573 584 aa8.65□□□□□ -1.02
PTCSC3-201ENST00000556013 ZNF318Q5VUA4 2279 aa8.65□□□□□ -1.03
PTCSC3-201ENST00000556013 ARL5CA6NH57 179 aa8.64□□□□□ -1.03
PTCSC3-201ENST00000556013 INO80B-WBP1J3KQ70 363 aa8.64□□□□□ -1.03
PTCSC3-201ENST00000556013 TSPAN1O60635 241 aa8.64□□□□□ -1.03
PTCSC3-201ENST00000556013 CNPP09543 421 aaKnown RBP8.64□□□□□ -1.03
PTCSC3-201ENST00000556013 SPATA31C1P0DKV0 1188 aa8.64□□□□□ -1.03
PTCSC3-201ENST00000556013 ARF4P18085 180 aaPredicted RBP8.64□□□□□ -1.03
PTCSC3-201ENST00000556013 GLRA2P23416 452 aa8.64□□□□□ -1.03
PTCSC3-201ENST00000556013 KLRC2P26717 231 aa8.64□□□□□ -1.03
PTCSC3-201ENST00000556013 AVPR2P30518 371 aa8.64□□□□□ -1.03
PTCSC3-201ENST00000556013 RBM25P49756 843 aaKnown RBP8.64□□□□□ -1.03
PTCSC3-201ENST00000556013 CLCN4P51793 760 aa8.64□□□□□ -1.03
PTCSC3-201ENST00000556013 PTPN5P54829 565 aa8.64□□□□□ -1.03
PTCSC3-201ENST00000556013 DSG1Q02413 1049 aa8.64□□□□□ -1.03
PTCSC3-201ENST00000556013 NHLH1Q02575 133 aa8.64□□□□□ -1.03
PTCSC3-201ENST00000556013 MBTD1Q05BQ5 628 aa8.64□□□□□ -1.03
PTCSC3-201ENST00000556013 PDIA5Q14554 519 aa8.64□□□□□ -1.03
PTCSC3-201ENST00000556013 AMHR2Q16671 573 aa8.64□□□□□ -1.03
PTCSC3-201ENST00000556013 KIAA0319Q5VV43 1072 aa8.64□□□□□ -1.03
PTCSC3-201ENST00000556013 LLGL2Q6P1M3 1020 aa8.64□□□□□ -1.03
PTCSC3-201ENST00000556013 SLC27A1Q6PCB7 646 aa8.64□□□□□ -1.03
PTCSC3-201ENST00000556013 OTOP3Q7RTS5 596 aa8.64□□□□□ -1.03
PTCSC3-201ENST00000556013 CABP7Q86V35 215 aa8.64□□□□□ -1.03
PTCSC3-201ENST00000556013 CATSPER3Q86XQ3 398 aa8.64□□□□□ -1.03
PTCSC3-201ENST00000556013 KCTD17Q8N5Z5 321 aa8.64□□□□□ -1.03
PTCSC3-201ENST00000556013 FBXO18Q8NFZ0 1043 aa8.64□□□□□ -1.03
PTCSC3-201ENST00000556013 ERMNQ8TAM6 284 aa8.64□□□□□ -1.03
PTCSC3-201ENST00000556013 NXPE3Q969Y0 559 aa8.64□□□□□ -1.03
PTCSC3-201ENST00000556013 ACSF2Q96CM8 615 aaPredicted RBP8.64□□□□□ -1.03
PTCSC3-201ENST00000556013 CCDC43Q96MW1 224 aaKnown RBP8.64□□□□□ -1.03
PTCSC3-201ENST00000556013 RPS6KC1Q96S38 1066 aa8.64□□□□□ -1.03
PTCSC3-201ENST00000556013 C2orf40Q9H1Z8 148 aa8.64□□□□□ -1.03
PTCSC3-201ENST00000556013 FZD8Q9H461 694 aa8.64□□□□□ -1.03
PTCSC3-201ENST00000556013 PLEKHA4Q9H4M7 779 aa8.64□□□□□ -1.03
PTCSC3-201ENST00000556013 POMKQ9H5K3 350 aa8.64□□□□□ -1.03
PTCSC3-201ENST00000556013 SFXN1Q9H9B4 322 aa8.64□□□□□ -1.03
PTCSC3-201ENST00000556013 FNIP2Q9P278 1114 aa8.64□□□□□ -1.03
PTCSC3-201ENST00000556013 DNAJB4Q9UDY4 337 aa8.64□□□□□ -1.03
PTCSC3-201ENST00000556013 MYO10Q9HD67 2058 aa8.63□□□□□ -1.03
PTCSC3-201ENST00000556013 FAM205CA6NFA0 338 aa8.63□□□□□ -1.03
PTCSC3-201ENST00000556013 C2CD4DB7Z1M9 353 aa8.63□□□□□ -1.03
PTCSC3-201ENST00000556013 POMCP01189 267 aa8.63□□□□□ -1.03
PTCSC3-201ENST00000556013 URODP06132 367 aa8.63□□□□□ -1.03
PTCSC3-201ENST00000556013 ADH1AP07327 375 aa8.63□□□□□ -1.03
PTCSC3-201ENST00000556013 CYP11B2P19099 503 aa8.63□□□□□ -1.03
PTCSC3-201ENST00000556013 MTMR3Q13615 1198 aa8.63□□□□□ -1.03
PTCSC3-201ENST00000556013 CAPSQ13938 189 aa8.63□□□□□ -1.03
PTCSC3-201ENST00000556013 PPP2R5AQ15172 486 aa8.63□□□□□ -1.03
PTCSC3-201ENST00000556013 RTL10Q7L3V2 364 aa8.63□□□□□ -1.03
PTCSC3-201ENST00000556013 GSTCDQ8NEC7 633 aa8.63□□□□□ -1.03
PTCSC3-201ENST00000556013 BCL7CQ8WUZ0 217 aaPredicted RBP8.63□□□□□ -1.03
PTCSC3-201ENST00000556013 STAMQ92783 540 aa8.63□□□□□ -1.03
PTCSC3-201ENST00000556013 C8orf76Q96K31 380 aa8.63□□□□□ -1.03
PTCSC3-201ENST00000556013 GAD1Q99259 594 aa8.63□□□□□ -1.03
PTCSC3-201ENST00000556013 HERC2P3Q9BVR0 1158 aa8.63□□□□□ -1.03
PTCSC3-201ENST00000556013 VN1R3Q9BXE9 311 aa8.63□□□□□ -1.03
PTCSC3-201ENST00000556013 TRIM6Q9C030 488 aaPredicted RBP8.63□□□□□ -1.03
PTCSC3-201ENST00000556013 RNF39Q9H2S5 420 aa8.63□□□□□ -1.03
PTCSC3-201ENST00000556013 SH2B1Q9NRF2 756 aaPredicted RBP8.63□□□□□ -1.03
PTCSC3-201ENST00000556013 MIOSQ9NXC5 875 aa8.63□□□□□ -1.03
PTCSC3-201ENST00000556013 KCNG1Q9UIX4 513 aa8.63□□□□□ -1.03
PTCSC3-201ENST00000556013 ZDBF2Q9HCK1 2354 aa8.63□□□□□ -1.03
PTCSC3-201ENST00000556013 TRIOO75962 3097 aa8.62□□□□□ -1.03
PTCSC3-201ENST00000556013 LAD1O00515 517 aa8.62□□□□□ -1.03
PTCSC3-201ENST00000556013 ACKR2O00590 384 aa8.62□□□□□ -1.03
PTCSC3-201ENST00000556013 B4GALT3O60512 393 aa8.62□□□□□ -1.03
PTCSC3-201ENST00000556013 JAK2O60674 1132 aa8.62□□□□□ -1.03
PTCSC3-201ENST00000556013 LARGE1O95461 756 aa8.62□□□□□ -1.03
PTCSC3-201ENST00000556013 EPCAMP16422 314 aa8.62□□□□□ -1.03
PTCSC3-201ENST00000556013 ATP2B1P20020 1258 aa8.62□□□□□ -1.03
PTCSC3-201ENST00000556013 CA8P35219 290 aa8.62□□□□□ -1.03
PTCSC3-201ENST00000556013 NAMPTP43490 491 aa8.62□□□□□ -1.03
PTCSC3-201ENST00000556013 OR1G1P47890 313 aa8.62□□□□□ -1.03
PTCSC3-201ENST00000556013 FXR2P51116 673 aaKnown RBP eCLIP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms