RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 DNAH12Q6ZR08 3092 aa12.07□□□□□ -0.48
TMEM260-208ENST00000555905 CLIC2O15247 247 aa12.07□□□□□ -0.48
TMEM260-208ENST00000555905 CSDE1O75534 798 aaKnown RBP12.07□□□□□ -0.48
TMEM260-208ENST00000555905 PIGRP01833 764 aa12.07□□□□□ -0.48
TMEM260-208ENST00000555905 CTSHP09668 335 aa12.07□□□□□ -0.48
TMEM260-208ENST00000555905 MATR3P43243 847 aaKnown RBP eCLIP12.07□□□□□ -0.48
TMEM260-208ENST00000555905 SPAG1Q07617 926 aa12.07□□□□□ -0.48
TMEM260-208ENST00000555905 MYBPC2Q14324 1141 aa12.07□□□□□ -0.48
TMEM260-208ENST00000555905 SNX17Q15036 470 aa12.07□□□□□ -0.48
TMEM260-208ENST00000555905 TSHZ1Q6ZSZ6 1077 aa12.07□□□□□ -0.48
TMEM260-208ENST00000555905 CATSPER4Q7RTX7 472 aa12.07□□□□□ -0.48
TMEM260-208ENST00000555905 ANKRD33Q7Z3H0 272 aa12.07□□□□□ -0.48
TMEM260-208ENST00000555905 C12orf56Q8IXR9 622 aa12.07□□□□□ -0.48
TMEM260-208ENST00000555905 ANKRD20A12PQ8NF67 263 aa12.07□□□□□ -0.48
TMEM260-208ENST00000555905 CAGE1Q8TC20 777 aa12.07□□□□□ -0.48
TMEM260-208ENST00000555905 TMEM174Q8WUU8 243 aa12.07□□□□□ -0.48
TMEM260-208ENST00000555905 POMGNT1Q8WZA1 660 aa12.07□□□□□ -0.48
TMEM260-208ENST00000555905 DHX38Q92620 1227 aaKnown RBP12.07□□□□□ -0.48
TMEM260-208ENST00000555905 WNT8BQ93098 351 aa12.07□□□□□ -0.48
TMEM260-208ENST00000555905 TARS2Q9BW92 718 aaKnown RBP12.07□□□□□ -0.48
TMEM260-208ENST00000555905 IKZF4Q9H2S9 585 aa12.07□□□□□ -0.48
TMEM260-208ENST00000555905 GRPEL1Q9HAV7 217 aa12.07□□□□□ -0.48
TMEM260-208ENST00000555905 CDHR5Q9HBB8 845 aa12.07□□□□□ -0.48
TMEM260-208ENST00000555905 SAMSN1Q9NSI8 373 aaKnown RBP12.07□□□□□ -0.48
TMEM260-208ENST00000555905 FRMD4BQ9Y2L6 1034 aa12.07□□□□□ -0.48
TMEM260-208ENST00000555905 CNTNAP2Q9UHC6 1331 aa12.07□□□□□ -0.48
TMEM260-208ENST00000555905 BRCA2P51587 3418 aa12.06□□□□□ -0.48
TMEM260-208ENST00000555905 TISP43B9A030 160 aa12.06□□□□□ -0.48
TMEM260-208ENST00000555905 ANKRD63C9JTQ0 380 aa12.06□□□□□ -0.48
TMEM260-208ENST00000555905 KIAA0391O15091 583 aaKnown RBP12.06□□□□□ -0.48
TMEM260-208ENST00000555905 CLDN3O15551 220 aa12.06□□□□□ -0.48
TMEM260-208ENST00000555905 TSPAN1O60635 241 aa12.06□□□□□ -0.48
TMEM260-208ENST00000555905 TOM1L1O75674 476 aa12.06□□□□□ -0.48
TMEM260-208ENST00000555905 GNA14O95837 355 aa12.06□□□□□ -0.48
TMEM260-208ENST00000555905 CD4P01730 458 aa12.06□□□□□ -0.48
TMEM260-208ENST00000555905 CHRNA1P02708 482 aa12.06□□□□□ -0.48
TMEM260-208ENST00000555905 IQCF3P0C7M6 154 aa12.06□□□□□ -0.48
TMEM260-208ENST00000555905 CKBP12277 381 aa12.06□□□□□ -0.48
TMEM260-208ENST00000555905 GARTP22102 1010 aa12.06□□□□□ -0.48
TMEM260-208ENST00000555905 MRE11P49959 708 aa12.06□□□□□ -0.48
TMEM260-208ENST00000555905 CYP2J2P51589 502 aa12.06□□□□□ -0.48
TMEM260-208ENST00000555905 MGAT3Q09327 533 aa12.06□□□□□ -0.48
TMEM260-208ENST00000555905 TRIM71Q2Q1W2 868 aaKnown RBP12.06□□□□□ -0.48
TMEM260-208ENST00000555905 TRIM60Q495X7 471 aa12.06□□□□□ -0.48
TMEM260-208ENST00000555905 FAM26DQ5JW98 314 aa12.06□□□□□ -0.48
TMEM260-208ENST00000555905 ATF7IP2Q5U623 682 aa12.06□□□□□ -0.48
TMEM260-208ENST00000555905 CDKAL1Q5VV42 579 aa12.06□□□□□ -0.48
TMEM260-208ENST00000555905 CEP135Q66GS9 1140 aa12.06□□□□□ -0.48
TMEM260-208ENST00000555905 LRRC55Q6ZSA7 311 aa12.06□□□□□ -0.48
TMEM260-208ENST00000555905 APBB1IPQ7Z5R6 666 aaPredicted RBP12.06□□□□□ -0.48
TMEM260-208ENST00000555905 FILIP1Q7Z7B0 1213 aa12.06□□□□□ -0.48
TMEM260-208ENST00000555905 CREBRFQ8IUR6 639 aa12.06□□□□□ -0.48
TMEM260-208ENST00000555905 SLC9A9Q8IVB4 645 aa12.06□□□□□ -0.48
TMEM260-208ENST00000555905 ZC3H3Q8IXZ2 948 aaKnown RBP12.06□□□□□ -0.48
TMEM260-208ENST00000555905 RNF25Q96BH1 459 aaPredicted RBP12.06□□□□□ -0.48
TMEM260-208ENST00000555905 EEF2KMTQ96G04 330 aa12.06□□□□□ -0.48
TMEM260-208ENST00000555905 TOX2Q96NM4 488 aa12.06□□□□□ -0.48
TMEM260-208ENST00000555905 ACO2Q99798 780 aaKnown RBP12.06□□□□□ -0.48
TMEM260-208ENST00000555905 TCHPQ9BT92 498 aa12.06□□□□□ -0.48
TMEM260-208ENST00000555905 HSPBP1Q9NZL4 362 aa12.06□□□□□ -0.48
TMEM260-208ENST00000555905 ANKFY1Q9P2R3 1169 aa12.06□□□□□ -0.48
TMEM260-208ENST00000555905 KIAA0100Q14667 2235 aaKnown RBP12.06□□□□□ -0.48
TMEM260-208ENST00000555905 KCNJ18B7U540 433 aa12.05□□□□□ -0.48
TMEM260-208ENST00000555905 N4BP3O15049 544 aa12.05□□□□□ -0.48
TMEM260-208ENST00000555905 SLC16A3O15427 465 aaKnown RBP12.05□□□□□ -0.48
TMEM260-208ENST00000555905 B4GALT5O43286 388 aa12.05□□□□□ -0.48
TMEM260-208ENST00000555905 EXOC3O60645 756 aa12.05□□□□□ -0.48
TMEM260-208ENST00000555905 RPS6KA5O75582 802 aa12.05□□□□□ -0.48
TMEM260-208ENST00000555905 TPM2P07951 284 aa12.05□□□□□ -0.48
TMEM260-208ENST00000555905 EPB41P11171 864 aaKnown RBP12.05□□□□□ -0.48
TMEM260-208ENST00000555905 ZNF18P17022 549 aa12.05□□□□□ -0.48
TMEM260-208ENST00000555905 EEF1GP26641 437 aaKnown RBP12.05□□□□□ -0.48
TMEM260-208ENST00000555905 AXLP30530 894 aa12.05□□□□□ -0.48
TMEM260-208ENST00000555905 PSMC2P35998 433 aaKnown RBP12.05□□□□□ -0.48
TMEM260-208ENST00000555905 PLCB2Q00722 1185 aa12.05□□□□□ -0.48
TMEM260-208ENST00000555905 TLE2Q04725 743 aa12.05□□□□□ -0.48
TMEM260-208ENST00000555905 RBL2Q08999 1139 aa12.05□□□□□ -0.48
TMEM260-208ENST00000555905 KCNJ12Q14500 433 aa12.05□□□□□ -0.48
TMEM260-208ENST00000555905 AMHR2Q16671 573 aa12.05□□□□□ -0.48
TMEM260-208ENST00000555905 CCDC40Q4G0X9 1142 aa12.05□□□□□ -0.48
TMEM260-208ENST00000555905 HSP90AA4PQ58FG1 418 aa12.05□□□□□ -0.48
TMEM260-208ENST00000555905 TCP11X2Q5H9J9 407 aa12.05□□□□□ -0.48
TMEM260-208ENST00000555905 ZNF618Q5T7W0 954 aa12.05□□□□□ -0.48
TMEM260-208ENST00000555905 SLC39A4Q6P5W5 647 aa12.05□□□□□ -0.48
TMEM260-208ENST00000555905 MPZL3Q6UWV2 235 aa12.05□□□□□ -0.48
TMEM260-208ENST00000555905 USP38Q8NB14 1042 aa12.05□□□□□ -0.48
TMEM260-208ENST00000555905 XXYLT1Q8NBI6 393 aa12.05□□□□□ -0.48
TMEM260-208ENST00000555905 CBWD1Q9BRT8 395 aa12.05□□□□□ -0.48
TMEM260-208ENST00000555905 MSTO1Q9BUK6 570 aa12.05□□□□□ -0.48
TMEM260-208ENST00000555905 HSD3B7Q9H2F3 369 aa12.05□□□□□ -0.48
TMEM260-208ENST00000555905 PCIF1Q9H4Z3 704 aa12.05□□□□□ -0.48
TMEM260-208ENST00000555905 KIAA1586Q9HCI6 787 aa12.05□□□□□ -0.48
TMEM260-208ENST00000555905 DMAC2Q9NW81 257 aa12.05□□□□□ -0.48
TMEM260-208ENST00000555905 TNFSF13BQ9Y275 285 aa12.05□□□□□ -0.48
TMEM260-208ENST00000555905 ATP11BQ9Y2G3 1177 aa12.05□□□□□ -0.48
TMEM260-208ENST00000555905 USP20Q9Y2K6 914 aa12.05□□□□□ -0.48
TMEM260-208ENST00000555905 STYXL1Q9Y6J8 313 aa12.05□□□□□ -0.48
TMEM260-208ENST00000555905 SQORQ9Y6N5 450 aa12.05□□□□□ -0.48
TMEM260-208ENST00000555905 GPR182O15218 404 aa12.04□□□□□ -0.48
TMEM260-208ENST00000555905 LDHAP00338 332 aaKnown RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms