RNA–Protein interactions for RNA: ENST00000555816.5

ATXN3-233, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-233ENST00000555816 SIPA1L3O60292 1781 aaPredicted RBP6.26□□□□□ -1.41
ATXN3-233ENST00000555816 ZNF609O15014 1411 aa6.26□□□□□ -1.41
ATXN3-233ENST00000555816 H0YGN5 161 aa6.26□□□□□ -1.41
ATXN3-233ENST00000555816 AGRPO00253 132 aa6.26□□□□□ -1.41
ATXN3-233ENST00000555816 KRIT1O00522 736 aa6.26□□□□□ -1.41
ATXN3-233ENST00000555816 SUSD5O60279 629 aa6.26□□□□□ -1.41
ATXN3-233ENST00000555816 FGRP09769 529 aa6.26□□□□□ -1.41
ATXN3-233ENST00000555816 ZBTB48P10074 688 aaPredicted RBP6.26□□□□□ -1.41
ATXN3-233ENST00000555816 GFRA1P56159 465 aa6.26□□□□□ -1.41
ATXN3-233ENST00000555816 SP3Q02447 781 aa6.26□□□□□ -1.41
ATXN3-233ENST00000555816 PRKG1Q13976 671 aa6.26□□□□□ -1.41
ATXN3-233ENST00000555816 C6orf15Q6UXA7 325 aaPredicted RBP6.26□□□□□ -1.41
ATXN3-233ENST00000555816 APOBEC3FQ8IUX4 373 aaKnown RBP6.26□□□□□ -1.41
ATXN3-233ENST00000555816 PPIL6Q8IXY8 311 aa6.26□□□□□ -1.41
ATXN3-233ENST00000555816 SLC17A8Q8NDX2 589 aa6.26□□□□□ -1.41
ATXN3-233ENST00000555816 TTLL11Q8NHH1 800 aa6.26□□□□□ -1.41
ATXN3-233ENST00000555816 MBD6Q96DN6 1003 aa6.26□□□□□ -1.41
ATXN3-233ENST00000555816 CHAMP1Q96JM3 812 aa6.26□□□□□ -1.41
ATXN3-233ENST00000555816 BARX1Q9HBU1 254 aaPredicted RBP6.26□□□□□ -1.41
ATXN3-233ENST00000555816 PPP4R1LQ9P1A2 415 aa6.26□□□□□ -1.41
ATXN3-233ENST00000555816 FTSJ1Q9UET6 329 aa6.26□□□□□ -1.41
ATXN3-233ENST00000555816 TMEFF2Q9UIK5 374 aaPredicted RBP6.26□□□□□ -1.41
ATXN3-233ENST00000555816 NUB1Q9Y5A7 615 aa6.26□□□□□ -1.41
ATXN3-233ENST00000555816 PCDHA2Q9Y5H9 948 aa6.26□□□□□ -1.41
ATXN3-233ENST00000555816 MYO3BQ8WXR4 1341 aa6.25□□□□□ -1.41
ATXN3-233ENST00000555816 SMAD7O15105 426 aaKnown RBP6.25□□□□□ -1.41
ATXN3-233ENST00000555816 CAPNS1P04632 268 aa6.25□□□□□ -1.41
ATXN3-233ENST00000555816 ATP2B1P20020 1258 aa6.25□□□□□ -1.41
ATXN3-233ENST00000555816 KCNJ6P48051 423 aa6.25□□□□□ -1.41
ATXN3-233ENST00000555816 SLC4A8Q2Y0W8 1093 aa6.25□□□□□ -1.41
ATXN3-233ENST00000555816 CCDC152Q4G0S7 254 aa6.25□□□□□ -1.41
ATXN3-233ENST00000555816 DACT2Q5SW24 774 aa6.25□□□□□ -1.41
ATXN3-233ENST00000555816 STRIP1Q5VSL9 837 aa6.25□□□□□ -1.41
ATXN3-233ENST00000555816 ARHGEF18Q6ZSZ5 1173 aa6.25□□□□□ -1.41
ATXN3-233ENST00000555816 LIMS2Q7Z4I7 341 aa6.25□□□□□ -1.41
ATXN3-233ENST00000555816 CIR1Q86X95 450 aaPredicted RBP6.25□□□□□ -1.41
ATXN3-233ENST00000555816 ZBTB38Q8NAP3 1195 aaPredicted RBP6.25□□□□□ -1.41
ATXN3-233ENST00000555816 DNERQ8NFT8 737 aa6.25□□□□□ -1.41
ATXN3-233ENST00000555816 CD99L2Q8TCZ2 262 aa6.25□□□□□ -1.41
ATXN3-233ENST00000555816 ZNF333Q96JL9 665 aa6.25□□□□□ -1.41
ATXN3-233ENST00000555816 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.25□□□□□ -1.41
ATXN3-233ENST00000555816 CLDND1Q9NY35 253 aa6.25□□□□□ -1.41
ATXN3-233ENST00000555816 PRKAG3Q9UGI9 489 aa6.25□□□□□ -1.41
ATXN3-233ENST00000555816 XDHP47989 1333 aa6.25□□□□□ -1.41
ATXN3-233ENST00000555816 MAPK8IP3Q9UPT6 1336 aa6.25□□□□□ -1.41
ATXN3-233ENST00000555816 LRG1P02750 347 aa6.24□□□□□ -1.41
ATXN3-233ENST00000555816 SSBP05455 408 aaKnown RBP eCLIP6.24□□□□□ -1.41
ATXN3-233ENST00000555816 RIPK4P57078 832 aa6.24□□□□□ -1.41
ATXN3-233ENST00000555816 MAP4K2Q12851 820 aa6.24□□□□□ -1.41
ATXN3-233ENST00000555816 CRHR2Q13324 411 aa6.24□□□□□ -1.41
ATXN3-233ENST00000555816 SUPT20HL1Q3ZLR7 823 aa6.24□□□□□ -1.41
ATXN3-233ENST00000555816 SLC35F1Q5T1Q4 408 aa6.24□□□□□ -1.41
ATXN3-233ENST00000555816 SLFN13Q68D06 897 aa6.24□□□□□ -1.41
ATXN3-233ENST00000555816 RSPO2Q6UXX9 243 aaPredicted RBP6.24□□□□□ -1.41
ATXN3-233ENST00000555816 EEPD1Q7L9B9 569 aa6.24□□□□□ -1.41
ATXN3-233ENST00000555816 ANKRD18AQ8IVF6 992 aa6.24□□□□□ -1.41
ATXN3-233ENST00000555816 ARRDC4Q8NCT1 418 aa6.24□□□□□ -1.41
ATXN3-233ENST00000555816 UBXN4Q92575 508 aa6.24□□□□□ -1.41
ATXN3-233ENST00000555816 ZBED3Q96IU2 234 aaPredicted RBP6.24□□□□□ -1.41
ATXN3-233ENST00000555816 WNK4Q96J92 1243 aa6.24□□□□□ -1.41
ATXN3-233ENST00000555816 SORCS2Q96PQ0 1159 aa6.24□□□□□ -1.41
ATXN3-233ENST00000555816 DEFB129Q9H1M3 183 aa6.24□□□□□ -1.41
ATXN3-233ENST00000555816 SLC6A20Q9NP91 592 aa6.24□□□□□ -1.41
ATXN3-233ENST00000555816 GPR27Q9NS67 375 aa6.24□□□□□ -1.41
ATXN3-233ENST00000555816 HYPKQ9NX55 129 aa6.24□□□□□ -1.41
ATXN3-233ENST00000555816 MYOTQ9UBF9 498 aa6.24□□□□□ -1.41
ATXN3-233ENST00000555816 DBF4Q9UBU7 674 aaPredicted RBP6.24□□□□□ -1.41
ATXN3-233ENST00000555816 DUOX1Q9NRD9 1551 aa6.23□□□□□ -1.41
ATXN3-233ENST00000555816 CHL1O00533 1208 aa6.23□□□□□ -1.41
ATXN3-233ENST00000555816 TBX1O43435 398 aa6.23□□□□□ -1.41
ATXN3-233ENST00000555816 PDE8AO60658 829 aa6.23□□□□□ -1.41
ATXN3-233ENST00000555816 DDAH1O94760 285 aa6.23□□□□□ -1.41
ATXN3-233ENST00000555816 HOXB7P09629 217 aa6.23□□□□□ -1.41
ATXN3-233ENST00000555816 GTF2F1P35269 517 aaKnown RBP eCLIP6.23□□□□□ -1.41
ATXN3-233ENST00000555816 GDF5P43026 501 aa6.23□□□□□ -1.41
ATXN3-233ENST00000555816 LMOD3Q0VAK6 560 aa6.23□□□□□ -1.41
ATXN3-233ENST00000555816 NFATC3Q12968 1075 aa6.23□□□□□ -1.41
ATXN3-233ENST00000555816 SLC9C1Q4G0N8 1177 aa6.23□□□□□ -1.41
ATXN3-233ENST00000555816 LARP1BQ659C4 914 aaKnown RBP6.23□□□□□ -1.41
ATXN3-233ENST00000555816 TTLL5Q6EMB2 1281 aa6.23□□□□□ -1.41
ATXN3-233ENST00000555816 KBTBD2Q8IY47 623 aa6.23□□□□□ -1.41
ATXN3-233ENST00000555816 SLC16A11Q8NCK7 471 aa6.23□□□□□ -1.41
ATXN3-233ENST00000555816 KCTD13Q8WZ19 329 aa6.23□□□□□ -1.41
ATXN3-233ENST00000555816 MXD3Q9BW11 206 aa6.23□□□□□ -1.41
ATXN3-233ENST00000555816 COA1Q9GZY4 146 aa6.23□□□□□ -1.41
ATXN3-233ENST00000555816 KLC2Q9H0B6 622 aa6.23□□□□□ -1.41
ATXN3-233ENST00000555816 CD248Q9HCU0 757 aa6.23□□□□□ -1.41
ATXN3-233ENST00000555816 CHPF2Q9P2E5 772 aa6.23□□□□□ -1.41
ATXN3-233ENST00000555816 ST6GALNAC2Q9UJ37 374 aa6.23□□□□□ -1.41
ATXN3-233ENST00000555816 PPP2R3BQ9Y5P8 575 aa6.23□□□□□ -1.41
ATXN3-233ENST00000555816 PAPPA2Q9BXP8 1791 aa6.23□□□□□ -1.41
ATXN3-233ENST00000555816 CYR61O00622 381 aa6.22□□□□□ -1.41
ATXN3-233ENST00000555816 WDHD1O75717 1129 aaPredicted RBP6.22□□□□□ -1.41
ATXN3-233ENST00000555816 FSHBP01225 129 aa6.22□□□□□ -1.41
ATXN3-233ENST00000555816 PCCAP05165 728 aaPredicted RBP6.22□□□□□ -1.41
ATXN3-233ENST00000555816 MLLT6P55198 1093 aaPredicted RBP6.22□□□□□ -1.41
ATXN3-233ENST00000555816 DLGAP5Q15398 846 aa6.22□□□□□ -1.41
ATXN3-233ENST00000555816 USP51Q70EK9 711 aa6.22□□□□□ -1.41
ATXN3-233ENST00000555816 ANKRD13AQ8IZ07 590 aa6.22□□□□□ -1.41
ATXN3-233ENST00000555816 TMEM145Q8NBT3 493 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms