RNA–Protein interactions for RNA: ENST00000555648.1

SNX6-205, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-205ENST00000555648 TMEM173Q86WV6 379 aaPredicted RBP17.1■□□□□ 0.33
SNX6-205ENST00000555648 AUTS2Q8WXX7 1259 aa17.1■□□□□ 0.33
SNX6-205ENST00000555648 SUSD6Q92537 303 aa17.1■□□□□ 0.33
SNX6-205ENST00000555648 RIPOR3Q96MK2 946 aa17.1■□□□□ 0.33
SNX6-205ENST00000555648 NECTIN4Q96NY8 510 aa17.1■□□□□ 0.33
SNX6-205ENST00000555648 EIF2AQ9BY44 585 aaKnown RBP17.1■□□□□ 0.33
SNX6-205ENST00000555648 S1PR5Q9H228 398 aa17.1■□□□□ 0.33
SNX6-205ENST00000555648 DZANK1Q9NVP4 752 aa17.1■□□□□ 0.33
SNX6-205ENST00000555648 GIT1Q9Y2X7 761 aa17.1■□□□□ 0.33
SNX6-205ENST00000555648 STK24Q9Y6E0 443 aa17.1■□□□□ 0.33
SNX6-205ENST00000555648 XIRP2A4UGR9 3374 aa17.1■□□□□ 0.33
SNX6-205ENST00000555648 LOC730098B7Z3J9 87 aa17.09■□□□□ 0.33
SNX6-205ENST00000555648 DDHD2O94830 711 aa17.09■□□□□ 0.33
SNX6-205ENST00000555648 SSBP05455 408 aaKnown RBP eCLIP17.09■□□□□ 0.33
SNX6-205ENST00000555648 ARF4P18085 180 aaPredicted RBP17.09■□□□□ 0.33
SNX6-205ENST00000555648 CCT6AP40227 531 aaKnown RBP17.09■□□□□ 0.33
SNX6-205ENST00000555648 MLH1P40692 756 aa17.09■□□□□ 0.33
SNX6-205ENST00000555648 C8orf34Q49A92 452 aa17.09■□□□□ 0.33
SNX6-205ENST00000555648 SLC27A1Q6PCB7 646 aa17.09■□□□□ 0.33
SNX6-205ENST00000555648 POTEGQ6S5H5 508 aa17.09■□□□□ 0.33
SNX6-205ENST00000555648 SMG8Q8ND04 991 aaKnown RBP17.09■□□□□ 0.33
SNX6-205ENST00000555648 RPS6KC1Q96S38 1066 aa17.09■□□□□ 0.33
SNX6-205ENST00000555648 GAD1Q99259 594 aa17.09■□□□□ 0.33
SNX6-205ENST00000555648 C2orf40Q9H1Z8 148 aa17.09■□□□□ 0.33
SNX6-205ENST00000555648 ADAM7Q9H2U9 754 aa17.09■□□□□ 0.33
SNX6-205ENST00000555648 GPRC5CQ9NQ84 441 aa17.09■□□□□ 0.33
SNX6-205ENST00000555648 TSHZ2Q9NRE2 1034 aa17.09■□□□□ 0.33
SNX6-205ENST00000555648 MRPL17Q9NRX2 175 aaKnown RBP17.09■□□□□ 0.33
SNX6-205ENST00000555648 PRMT7Q9NVM4 692 aaPredicted RBP17.09■□□□□ 0.33
SNX6-205ENST00000555648 PARP2Q9UGN5 583 aa17.09■□□□□ 0.33
SNX6-205ENST00000555648 SSX2IPQ9Y2D8 614 aa17.09■□□□□ 0.33
SNX6-205ENST00000555648 PRG3Q9Y2Y8 225 aaPredicted RBP17.09■□□□□ 0.33
SNX6-205ENST00000555648 NR2E1Q9Y466 385 aa17.09■□□□□ 0.33
SNX6-205ENST00000555648 ARIH1Q9Y4X5 557 aaPredicted RBP17.09■□□□□ 0.33
SNX6-205ENST00000555648 HES2Q9Y543 173 aa17.09■□□□□ 0.33
SNX6-205ENST00000555648 IRAK3Q9Y616 596 aa17.09■□□□□ 0.33
SNX6-205ENST00000555648 BDP1A6H8Y1 2624 aa17.08■□□□□ 0.33
SNX6-205ENST00000555648 ARL5CA6NH57 179 aa17.08■□□□□ 0.32
SNX6-205ENST00000555648 NRP1O14786 923 aa17.08■□□□□ 0.32
SNX6-205ENST00000555648 NPTXRO95502 500 aa17.08■□□□□ 0.32
SNX6-205ENST00000555648 URODP06132 367 aa17.08■□□□□ 0.32
SNX6-205ENST00000555648 MUTP22033 750 aa17.08■□□□□ 0.32
SNX6-205ENST00000555648 KLRC2P26717 231 aa17.08■□□□□ 0.32
SNX6-205ENST00000555648 PLA2G5P39877 138 aa17.08■□□□□ 0.32
SNX6-205ENST00000555648 MTHFRP42898 656 aa17.08■□□□□ 0.32
SNX6-205ENST00000555648 PPP2R5AQ15172 486 aa17.08■□□□□ 0.32
SNX6-205ENST00000555648 RARS2Q5T160 578 aaKnown RBP17.08■□□□□ 0.32
SNX6-205ENST00000555648 KIAA1841Q6NSI8 718 aa17.08■□□□□ 0.32
SNX6-205ENST00000555648 PADI6Q6TGC4 694 aa17.08■□□□□ 0.32
SNX6-205ENST00000555648 CABP7Q86V35 215 aa17.08■□□□□ 0.32
SNX6-205ENST00000555648 DEPTORQ8TB45 409 aa17.08■□□□□ 0.32
SNX6-205ENST00000555648 BCL7CQ8WUZ0 217 aaPredicted RBP17.08■□□□□ 0.32
SNX6-205ENST00000555648 EDAQ92838 391 aa17.08■□□□□ 0.32
SNX6-205ENST00000555648 IFT74Q96LB3 600 aa17.08■□□□□ 0.32
SNX6-205ENST00000555648 MFSD14AQ96MC6 490 aa17.08■□□□□ 0.32
SNX6-205ENST00000555648 COLEC11Q9BWP8 271 aa17.08■□□□□ 0.32
SNX6-205ENST00000555648 LRWD1Q9UFC0 647 aa17.08■□□□□ 0.32
SNX6-205ENST00000555648 PLXNA4Q9HCM2 1894 aa17.07■□□□□ 0.32
SNX6-205ENST00000555648 B4GALT5O43286 388 aa17.07■□□□□ 0.32
SNX6-205ENST00000555648 LIG1P18858 919 aa17.07■□□□□ 0.32
SNX6-205ENST00000555648 CYP11B2P19099 503 aa17.07■□□□□ 0.32
SNX6-205ENST00000555648 SP100P23497 879 aaPredicted RBP17.07■□□□□ 0.32
SNX6-205ENST00000555648 SCNN1GP51170 649 aa17.07■□□□□ 0.32
SNX6-205ENST00000555648 AFF1P51825 1210 aaKnown RBP17.07■□□□□ 0.32
SNX6-205ENST00000555648 PTPN14Q15678 1187 aa17.07■□□□□ 0.32
SNX6-205ENST00000555648 MAPK6Q16659 721 aa17.07■□□□□ 0.32
SNX6-205ENST00000555648 ATAT1Q5SQI0 421 aa17.07■□□□□ 0.32
SNX6-205ENST00000555648 MCTP1Q6DN14 999 aa17.07■□□□□ 0.32
SNX6-205ENST00000555648 ELMSAN1Q6PJG2 1045 aa17.07■□□□□ 0.32
SNX6-205ENST00000555648 PRIMPOLQ96LW4 560 aa17.07■□□□□ 0.32
SNX6-205ENST00000555648 KIF2CQ99661 725 aa17.07■□□□□ 0.32
SNX6-205ENST00000555648 ADPGKQ9BRR6 497 aa17.07■□□□□ 0.32
SNX6-205ENST00000555648 RNF39Q9H2S5 420 aa17.07■□□□□ 0.32
SNX6-205ENST00000555648 NXF3Q9H4D5 531 aaKnown RBP17.07■□□□□ 0.32
SNX6-205ENST00000555648 WDR81Q562E7 1941 aa17.07■□□□□ 0.32
SNX6-205ENST00000555648 A0A1B0GUA9 196 aa17.06■□□□□ 0.32
SNX6-205ENST00000555648 C2CD2LO14523 706 aa17.06■□□□□ 0.32
SNX6-205ENST00000555648 N4BP3O15049 544 aa17.06■□□□□ 0.32
SNX6-205ENST00000555648 AKAP5P24588 427 aa17.06■□□□□ 0.32
SNX6-205ENST00000555648 FXR2P51116 673 aaKnown RBP eCLIP17.06■□□□□ 0.32
SNX6-205ENST00000555648 PRPF4BQ13523 1007 aaKnown RBP17.06■□□□□ 0.32
SNX6-205ENST00000555648 AMHR2Q16671 573 aa17.06■□□□□ 0.32
SNX6-205ENST00000555648 KRT79Q5XKE5 535 aa17.06■□□□□ 0.32
SNX6-205ENST00000555648 CDR2LQ86X02 465 aaPredicted RBP17.06■□□□□ 0.32
SNX6-205ENST00000555648 COLGALT2Q8IYK4 626 aa17.06■□□□□ 0.32
SNX6-205ENST00000555648 SNX29Q8TEQ0 813 aa17.06■□□□□ 0.32
SNX6-205ENST00000555648 ZFP42Q96MM3 310 aa17.06■□□□□ 0.32
SNX6-205ENST00000555648 REV3LO60673 3130 aa17.06■□□□□ 0.32
SNX6-205ENST00000555648 H3BQV1 296 aa17.05■□□□□ 0.32
SNX6-205ENST00000555648 LAD1O00515 517 aa17.05■□□□□ 0.32
SNX6-205ENST00000555648 B4GALT3O60512 393 aa17.05■□□□□ 0.32
SNX6-205ENST00000555648 SOD2P04179 222 aa17.05■□□□□ 0.32
SNX6-205ENST00000555648 EPCAMP16422 314 aa17.05■□□□□ 0.32
SNX6-205ENST00000555648 U2AF2P26368 475 aaKnown RBP eCLIP17.05■□□□□ 0.32
SNX6-205ENST00000555648 NAMPTP43490 491 aa17.05■□□□□ 0.32
SNX6-205ENST00000555648 ZXDAP98168 799 aa17.05■□□□□ 0.32
SNX6-205ENST00000555648 PTGDRQ13258 359 aa17.05■□□□□ 0.32
SNX6-205ENST00000555648 PDIA5Q14554 519 aa17.05■□□□□ 0.32
SNX6-205ENST00000555648 NBR1Q14596 966 aa17.05■□□□□ 0.32
SNX6-205ENST00000555648 PPP4R3CPQ6ZMV5 832 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms