RNA–Protein interactions for RNA: ENST00000555563.5

SHMT2-219, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-219ENST00000555563 TMEM132AQ24JP5 1023 aa15.13■□□□□ 0.01
SHMT2-219ENST00000555563 FOXD4L6Q3SYB3 417 aaPredicted RBP15.13■□□□□ 0.01
SHMT2-219ENST00000555563 ARSHQ5FYA8 562 aa15.13■□□□□ 0.01
SHMT2-219ENST00000555563 TCEAL5Q5H9L2 206 aa15.13■□□□□ 0.01
SHMT2-219ENST00000555563 FOXD4L3Q6VB84 417 aaPredicted RBP15.13■□□□□ 0.01
SHMT2-219ENST00000555563 GPBP1Q86WP2 473 aa15.13■□□□□ 0.01
SHMT2-219ENST00000555563 LINC00301Q8NCQ3 95 aa15.13■□□□□ 0.01
SHMT2-219ENST00000555563 CNNM3Q8NE01 707 aa15.13■□□□□ 0.01
SHMT2-219ENST00000555563 URGCPQ8TCY9 931 aa15.13■□□□□ 0.01
SHMT2-219ENST00000555563 POF1BQ8WVV4 589 aa15.13■□□□□ 0.01
SHMT2-219ENST00000555563 APOL6Q9BWW8 343 aa15.13■□□□□ 0.01
SHMT2-219ENST00000555563 RNF39Q9H2S5 420 aa15.13■□□□□ 0.01
SHMT2-219ENST00000555563 NSUN3Q9H649 340 aaKnown RBP15.13■□□□□ 0.01
SHMT2-219ENST00000555563 C17orf75Q9HAS0 396 aa15.13■□□□□ 0.01
SHMT2-219ENST00000555563 KMT5AQ9NQR1 393 aa15.13■□□□□ 0.01
SHMT2-219ENST00000555563 ARHGAP28Q9P2N2 729 aa15.13■□□□□ 0.01
SHMT2-219ENST00000555563 TFIP11Q9UBB9 837 aaKnown RBP15.13■□□□□ 0.01
SHMT2-219ENST00000555563 SFI1A8K8P3 1242 aa15.12■□□□□ 0.01
SHMT2-219ENST00000555563 N4BP3O15049 544 aa15.12■□□□□ 0.01
SHMT2-219ENST00000555563 B4GALT3O60512 393 aa15.12■□□□□ 0.01
SHMT2-219ENST00000555563 ZC3H11AO75152 810 aaKnown RBP eCLIP15.12■□□□□ 0.01
SHMT2-219ENST00000555563 IRS1P35568 1242 aa15.12■□□□□ 0.01
SHMT2-219ENST00000555563 PPM1AP35813 382 aa15.12■□□□□ 0.01
SHMT2-219ENST00000555563 TXLNAP40222 546 aa15.12■□□□□ 0.01
SHMT2-219ENST00000555563 MLH1P40692 756 aa15.12■□□□□ 0.01
SHMT2-219ENST00000555563 BCAR1P56945 870 aa15.12■□□□□ 0.01
SHMT2-219ENST00000555563 RNASELQ05823 741 aaKnown RBP15.12■□□□□ 0.01
SHMT2-219ENST00000555563 DHX8Q14562 1220 aaKnown RBP15.12■□□□□ 0.01
SHMT2-219ENST00000555563 EEF1DP3Q658K8 133 aa15.12■□□□□ 0.01
SHMT2-219ENST00000555563 LARP4BQ92615 738 aaKnown RBP15.12■□□□□ 0.01
SHMT2-219ENST00000555563 REEP2Q9BRK0 252 aa15.12■□□□□ 0.01
SHMT2-219ENST00000555563 NRDE2Q9H7Z3 1164 aa15.12■□□□□ 0.01
SHMT2-219ENST00000555563 PCDHGC5Q9Y5F6 944 aa15.12■□□□□ 0.01
SHMT2-219ENST00000555563 MUC3AQ02505 3323 aa15.12■□□□□ 0.01
SHMT2-219ENST00000555563 MYH11P35749 1972 aa15.12■□□□□ 0.01
SHMT2-219ENST00000555563 SPTLC2O15270 562 aa15.11■□□□□ 0.01
SHMT2-219ENST00000555563 SLC16A4O15374 487 aa15.11■□□□□ 0.01
SHMT2-219ENST00000555563 YEATS4O95619 227 aa15.11■□□□□ 0.01
SHMT2-219ENST00000555563 PLS3P13797 630 aa15.11■□□□□ 0.01
SHMT2-219ENST00000555563 PLCB3Q01970 1234 aa15.11■□□□□ 0.01
SHMT2-219ENST00000555563 TFF2Q03403 129 aa15.11■□□□□ 0.01
SHMT2-219ENST00000555563 UBE3AQ05086 875 aa15.11■□□□□ 0.01
SHMT2-219ENST00000555563 TAS1R3Q7RTX0 852 aa15.11■□□□□ 0.01
SHMT2-219ENST00000555563 TMEM173Q86WV6 379 aaPredicted RBP15.11■□□□□ 0.01
SHMT2-219ENST00000555563 ZNF280BQ86YH2 543 aa15.11■□□□□ 0.01
SHMT2-219ENST00000555563 HACE1Q8IYU2 909 aa15.11■□□□□ 0.01
SHMT2-219ENST00000555563 SLC39A11Q8N1S5 342 aa15.11■□□□□ 0.01
SHMT2-219ENST00000555563 SPIRE2Q8WWL2 714 aa15.11■□□□□ 0.01
SHMT2-219ENST00000555563 ZFP42Q96MM3 310 aa15.11■□□□□ 0.01
SHMT2-219ENST00000555563 ASB2Q96Q27 587 aa15.11■□□□□ 0.01
SHMT2-219ENST00000555563 GAD1Q99259 594 aa15.11■□□□□ 0.01
SHMT2-219ENST00000555563 GBP3Q9H0R5 595 aa15.11■□□□□ 0.01
SHMT2-219ENST00000555563 UBN1Q9NPG3 1134 aa15.11■□□□□ 0.01
SHMT2-219ENST00000555563 TLR9Q9NR96 1032 aa15.11■□□□□ 0.01
SHMT2-219ENST00000555563 SPG21Q9NZD8 308 aa15.11■□□□□ 0.01
SHMT2-219ENST00000555563 DNAJB4Q9UDY4 337 aa15.11■□□□□ 0.01
SHMT2-219ENST00000555563 STK17AQ9UEE5 414 aa15.11■□□□□ 0.01
SHMT2-219ENST00000555563 ODF2LQ9ULJ1 636 aa15.11■□□□□ 0.01
SHMT2-219ENST00000555563 ARL5CA6NH57 179 aa15.1■□□□□ 0.01
SHMT2-219ENST00000555563 NT5C1B-RDH14C9J2C7 533 aa15.1■□□□□ 0.01
SHMT2-219ENST00000555563 K7ERI5 159 aa15.1■□□□□ 0.01
SHMT2-219ENST00000555563 INPPL1O15357 1258 aa15.1■□□□□ 0.01
SHMT2-219ENST00000555563 POMCP01189 267 aa15.1■□□□□ 0.01
SHMT2-219ENST00000555563 COL9A1P20849 921 aa15.1■□□□□ 0.01
SHMT2-219ENST00000555563 AKAP5P24588 427 aa15.1■□□□□ 0.01
SHMT2-219ENST00000555563 MRPS5P82675 430 aaKnown RBP15.1■□□□□ 0.01
SHMT2-219ENST00000555563 NT5DC1Q5TFE4 455 aa15.1■□□□□ 0.01
SHMT2-219ENST00000555563 ATF7IP2Q5U623 682 aa15.1■□□□□ 0.01
SHMT2-219ENST00000555563 ADGRD2Q7Z7M1 963 aa15.1■□□□□ 0.01
SHMT2-219ENST00000555563 MRPS27Q92552 414 aaKnown RBP15.1■□□□□ 0.01
SHMT2-219ENST00000555563 HLA-CQ95604 372 aa15.1■□□□□ 0.01
SHMT2-219ENST00000555563 ADPGKQ9BRR6 497 aa15.1■□□□□ 0.01
SHMT2-219ENST00000555563 TMEM134Q9H6X4 195 aa15.1■□□□□ 0.01
SHMT2-219ENST00000555563 CCDC39Q9UFE4 941 aa15.1■□□□□ 0.01
SHMT2-219ENST00000555563 COG5Q9UP83 839 aa15.1■□□□□ 0.01
SHMT2-219ENST00000555563 LZTS1Q9Y250 596 aa15.1■□□□□ 0.01
SHMT2-219ENST00000555563 GIT1Q9Y2X7 761 aa15.1■□□□□ 0.01
SHMT2-219ENST00000555563 ZMYM2Q9UBW7 1377 aa15.1■□□□□ 0.01
SHMT2-219ENST00000555563 A0A087X0B3 334 aa15.09■□□□□ 0.01
SHMT2-219ENST00000555563 FSCN2O14926 492 aa15.09■□□□□ 0.01
SHMT2-219ENST00000555563 PPP6R2O75170 966 aa15.09■□□□□ 0.01
SHMT2-219ENST00000555563 DDHD2O94830 711 aa15.09■□□□□ 0.01
SHMT2-219ENST00000555563 KRT18P05783 430 aaKnown RBP15.09■□□□□ 0.01
SHMT2-219ENST00000555563 GTF2F1P35269 517 aaKnown RBP eCLIP15.09■□□□□ 0.01
SHMT2-219ENST00000555563 SLC11A1P49279 550 aa15.09■□□□□ 0.01
SHMT2-219ENST00000555563 ALDH7A1P49419 539 aaKnown RBP15.09■□□□□ 0.01
SHMT2-219ENST00000555563 SCNN1GP51170 649 aa15.09■□□□□ 0.01
SHMT2-219ENST00000555563 ERVFC1P60507 584 aa15.09■□□□□ 0.01
SHMT2-219ENST00000555563 HYAL1Q12794 435 aa15.09■□□□□ 0.01
SHMT2-219ENST00000555563 GIT2Q14161 759 aa15.09■□□□□ 0.01
SHMT2-219ENST00000555563 COL19A1Q14993 1142 aa15.09■□□□□ 0.01
SHMT2-219ENST00000555563 RRAGBQ5VZM2 374 aa15.09■□□□□ 0.01
SHMT2-219ENST00000555563 TMEM161BQ8NDZ6 487 aa15.09■□□□□ 0.01
SHMT2-219ENST00000555563 BCL7CQ8WUZ0 217 aaPredicted RBP15.09■□□□□ 0.01
SHMT2-219ENST00000555563 NTPCRQ9BSD7 190 aaKnown RBP15.09■□□□□ 0.01
SHMT2-219ENST00000555563 MRPL4Q9BYD3 311 aaKnown RBP15.09■□□□□ 0.01
SHMT2-219ENST00000555563 UBE2ZQ9H832 354 aaPredicted RBP15.09■□□□□ 0.01
SHMT2-219ENST00000555563 KLK14Q9P0G3 267 aa15.09■□□□□ 0.01
SHMT2-219ENST00000555563 LARSQ9P2J5 1176 aaKnown RBP15.09■□□□□ 0.01
SHMT2-219ENST00000555563 KANSL3Q9P2N6 904 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms