RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 UBA7P41226 1012 aa22.63■■□□□ 1.21
VTI1B-205ENST00000555543 NPTX2P47972 431 aa22.63■■□□□ 1.21
VTI1B-205ENST00000555543 PEX3P56589 373 aa22.63■■□□□ 1.21
VTI1B-205ENST00000555543 RNASELQ05823 741 aaKnown RBP22.63■■□□□ 1.21
VTI1B-205ENST00000555543 PRPF4BQ13523 1007 aaKnown RBP22.63■■□□□ 1.21
VTI1B-205ENST00000555543 CTC1Q2NKJ3 1217 aa22.63■■□□□ 1.21
VTI1B-205ENST00000555543 KCTD17Q8N5Z5 321 aa22.63■■□□□ 1.21
VTI1B-205ENST00000555543 URGCPQ8TCY9 931 aa22.63■■□□□ 1.21
VTI1B-205ENST00000555543 ADAMTS19Q8TE59 1207 aa22.63■■□□□ 1.21
VTI1B-205ENST00000555543 BCL7CQ8WUZ0 217 aaPredicted RBP22.63■■□□□ 1.21
VTI1B-205ENST00000555543 ZFP42Q96MM3 310 aa22.63■■□□□ 1.21
VTI1B-205ENST00000555543 USP28Q96RU2 1077 aa22.63■■□□□ 1.21
VTI1B-205ENST00000555543 TRIM6Q9C030 488 aaPredicted RBP22.63■■□□□ 1.21
VTI1B-205ENST00000555543 CLDND1Q9NY35 253 aa22.63■■□□□ 1.21
VTI1B-205ENST00000555543 FBXO2Q9UK22 296 aaPredicted RBP22.63■■□□□ 1.21
VTI1B-205ENST00000555543 TCF20Q9UGU0 1960 aaKnown RBP22.62■■□□□ 1.21
VTI1B-205ENST00000555543 ARL5CA6NH57 179 aa22.62■■□□□ 1.21
VTI1B-205ENST00000555543 H3BQ06 376 aaPredicted RBP22.62■■□□□ 1.21
VTI1B-205ENST00000555543 ACKR2O00590 384 aa22.62■■□□□ 1.21
VTI1B-205ENST00000555543 INPPL1O15357 1258 aa22.62■■□□□ 1.21
VTI1B-205ENST00000555543 SLC26A4O43511 780 aa22.62■■□□□ 1.21
VTI1B-205ENST00000555543 POMCP01189 267 aa22.62■■□□□ 1.21
VTI1B-205ENST00000555543 LTBRP36941 435 aa22.62■■□□□ 1.21
VTI1B-205ENST00000555543 MLH1P40692 756 aa22.62■■□□□ 1.21
VTI1B-205ENST00000555543 SLC11A1P49279 550 aa22.62■■□□□ 1.21
VTI1B-205ENST00000555543 ALDH7A1P49419 539 aaKnown RBP22.62■■□□□ 1.21
VTI1B-205ENST00000555543 KARSQ15046 597 aaKnown RBP22.62■■□□□ 1.21
VTI1B-205ENST00000555543 SPECC1Q5M775 1068 aa22.62■■□□□ 1.21
VTI1B-205ENST00000555543 EEF1DP3Q658K8 133 aa22.62■■□□□ 1.21
VTI1B-205ENST00000555543 EP400NLQ6ZTU2 488 aa22.62■■□□□ 1.21
VTI1B-205ENST00000555543 USP49Q70CQ1 688 aa22.62■■□□□ 1.21
VTI1B-205ENST00000555543 SYMPKQ92797 1274 aaKnown RBP22.62■■□□□ 1.21
VTI1B-205ENST00000555543 DRC1Q96MC2 740 aa22.62■■□□□ 1.21
VTI1B-205ENST00000555543 GAD1Q99259 594 aa22.62■■□□□ 1.21
VTI1B-205ENST00000555543 ZSCAN16Q9H4T2 348 aaPredicted RBP22.62■■□□□ 1.21
VTI1B-205ENST00000555543 IGFLR1Q9H665 355 aa22.62■■□□□ 1.21
VTI1B-205ENST00000555543 BLOC1S4Q9NUP1 217 aa22.62■■□□□ 1.21
VTI1B-205ENST00000555543 BDP1A6H8Y1 2624 aa22.61■■□□□ 1.21
VTI1B-205ENST00000555543 MYH15Q9Y2K3 1946 aa22.61■■□□□ 1.21
VTI1B-205ENST00000555543 NPHP3-ACAD11A0A0J9YXS1 232 aa22.61■■□□□ 1.21
VTI1B-205ENST00000555543 CCDC169A6NNP5 214 aa22.61■■□□□ 1.21
VTI1B-205ENST00000555543 SFI1A8K8P3 1242 aa22.61■■□□□ 1.21
VTI1B-205ENST00000555543 GALTP07902 379 aa22.61■■□□□ 1.21
VTI1B-205ENST00000555543 PLCG1P19174 1290 aa22.61■■□□□ 1.21
VTI1B-205ENST00000555543 AKAP5P24588 427 aa22.61■■□□□ 1.21
VTI1B-205ENST00000555543 NRIP1P48552 1158 aa22.61■■□□□ 1.21
VTI1B-205ENST00000555543 EFNA5P52803 228 aa22.61■■□□□ 1.21
VTI1B-205ENST00000555543 DLX2Q07687 328 aaPredicted RBP22.61■■□□□ 1.21
VTI1B-205ENST00000555543 LEXMQ3ZCV2 418 aa22.61■■□□□ 1.21
VTI1B-205ENST00000555543 ARSHQ5FYA8 562 aa22.61■■□□□ 1.21
VTI1B-205ENST00000555543 PLPP4Q5VZY2 271 aa22.61■■□□□ 1.21
VTI1B-205ENST00000555543 TAS1R3Q7RTX0 852 aa22.61■■□□□ 1.21
VTI1B-205ENST00000555543 RBM23Q86U06 439 aaKnown RBP22.61■■□□□ 1.21
VTI1B-205ENST00000555543 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.61■■□□□ 1.21
VTI1B-205ENST00000555543 MICAL1Q8TDZ2 1067 aa22.61■■□□□ 1.21
VTI1B-205ENST00000555543 CALML4Q96GE6 196 aa22.61■■□□□ 1.21
VTI1B-205ENST00000555543 EPSTI1Q96J88 318 aa22.61■■□□□ 1.21
VTI1B-205ENST00000555543 CLIC6Q96NY7 704 aa22.61■■□□□ 1.21
VTI1B-205ENST00000555543 NECAB3Q96P71 396 aaPredicted RBP22.61■■□□□ 1.21
VTI1B-205ENST00000555543 UBN1Q9NPG3 1134 aa22.61■■□□□ 1.21
VTI1B-205ENST00000555543 MIOSQ9NXC5 875 aa22.61■■□□□ 1.21
VTI1B-205ENST00000555543 N4BP3O15049 544 aa22.6■■□□□ 1.21
VTI1B-205ENST00000555543 TBX10O75333 385 aa22.6■■□□□ 1.21
VTI1B-205ENST00000555543 SCNN1GP51170 649 aa22.6■■□□□ 1.21
VTI1B-205ENST00000555543 CACNB1Q02641 598 aaPredicted RBP22.6■■□□□ 1.21
VTI1B-205ENST00000555543 KRT17Q04695 432 aa22.6■■□□□ 1.21
VTI1B-205ENST00000555543 DMP1Q13316 513 aaPredicted RBP22.6■■□□□ 1.21
VTI1B-205ENST00000555543 NT5DC1Q5TFE4 455 aa22.6■■□□□ 1.21
VTI1B-205ENST00000555543 SPRYD3Q8NCJ5 442 aa22.6■■□□□ 1.21
VTI1B-205ENST00000555543 IGSF21Q96ID5 467 aa22.6■■□□□ 1.21
VTI1B-205ENST00000555543 TCF25Q9BQ70 676 aa22.6■■□□□ 1.21
VTI1B-205ENST00000555543 TIPINQ9BVW5 301 aa22.6■■□□□ 1.21
VTI1B-205ENST00000555543 ARHGAP28Q9P2N2 729 aa22.6■■□□□ 1.21
VTI1B-205ENST00000555543 PUF60Q9UHX1 559 aaKnown RBP22.6■■□□□ 1.21
VTI1B-205ENST00000555543 GIT1Q9Y2X7 761 aa22.6■■□□□ 1.21
VTI1B-205ENST00000555543 SRPRBQ9Y5M8 271 aaKnown RBP22.6■■□□□ 1.21
VTI1B-205ENST00000555543 PHLPP2Q6ZVD8 1323 aa22.59■■□□□ 1.21
VTI1B-205ENST00000555543 HIDE1A8MVS5 230 aa22.59■■□□□ 1.21
VTI1B-205ENST00000555543 HSP90AA1P07900 732 aaKnown RBP22.59■■□□□ 1.21
VTI1B-205ENST00000555543 TMEM132AQ24JP5 1023 aa22.59■■□□□ 1.21
VTI1B-205ENST00000555543 FOXD4L5Q5VV16 416 aaPredicted RBP22.59■■□□□ 1.21
VTI1B-205ENST00000555543 GSTCDQ8NEC7 633 aa22.59■■□□□ 1.21
VTI1B-205ENST00000555543 FOXD4L4Q8WXT5 416 aaPredicted RBP22.59■■□□□ 1.21
VTI1B-205ENST00000555543 PPP2R3CQ969Q6 453 aa22.59■■□□□ 1.21
VTI1B-205ENST00000555543 VN1R3Q9BXE9 311 aa22.59■■□□□ 1.21
VTI1B-205ENST00000555543 CCSER1Q9C0I3 900 aa22.59■■□□□ 1.21
VTI1B-205ENST00000555543 KMT5AQ9NQR1 393 aa22.59■■□□□ 1.21
VTI1B-205ENST00000555543 ENTPD7Q9NQZ7 604 aa22.59■■□□□ 1.21
VTI1B-205ENST00000555543 KLK14Q9P0G3 267 aa22.59■■□□□ 1.21
VTI1B-205ENST00000555543 KANSL3Q9P2N6 904 aa22.59■■□□□ 1.21
VTI1B-205ENST00000555543 K7ERI5 159 aa22.58■■□□□ 1.21
VTI1B-205ENST00000555543 PER2O15055 1255 aa22.58■■□□□ 1.21
VTI1B-205ENST00000555543 SLC16A4O15374 487 aa22.58■■□□□ 1.21
VTI1B-205ENST00000555543 NCK2O43639 380 aa22.58■■□□□ 1.21
VTI1B-205ENST00000555543 GLP2RO95838 553 aa22.58■■□□□ 1.21
VTI1B-205ENST00000555543 RBM10P98175 930 aaKnown RBP22.58■■□□□ 1.21
VTI1B-205ENST00000555543 ADAM15Q13444 863 aa22.58■■□□□ 1.21
VTI1B-205ENST00000555543 DHX8Q14562 1220 aaKnown RBP22.58■■□□□ 1.21
VTI1B-205ENST00000555543 MCM6Q14566 821 aa22.58■■□□□ 1.21
VTI1B-205ENST00000555543 PDE12Q6L8Q7 609 aaKnown RBP22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms