RNA–Protein interactions for RNA: ENST00000555537.1

NEK9-206, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 675 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-206ENST00000555537 LILRA6Q6PI73 481 aa9.4□□□□□ -0.9
NEK9-206ENST00000555537 MIER3Q7Z3K6 550 aa9.4□□□□□ -0.9
NEK9-206ENST00000555537 ZNF410Q86VK4 478 aa9.4□□□□□ -0.9
NEK9-206ENST00000555537 TEX2Q8IWB9 1127 aa9.4□□□□□ -0.9
NEK9-206ENST00000555537 RNF168Q8IYW5 571 aaPredicted RBP9.4□□□□□ -0.9
NEK9-206ENST00000555537 ZNF713Q8N859 430 aaPredicted RBP9.4□□□□□ -0.9
NEK9-206ENST00000555537 ZNF579Q8NAF0 562 aaKnown RBP9.4□□□□□ -0.9
NEK9-206ENST00000555537 SMG8Q8ND04 991 aaKnown RBP9.4□□□□□ -0.9
NEK9-206ENST00000555537 SLC5A5Q92911 643 aa9.4□□□□□ -0.9
NEK9-206ENST00000555537 PHKBQ93100 1093 aa9.4□□□□□ -0.9
NEK9-206ENST00000555537 SHDQ96IW2 340 aa9.4□□□□□ -0.9
NEK9-206ENST00000555537 CHAMP1Q96JM3 812 aa9.4□□□□□ -0.9
NEK9-206ENST00000555537 GAD1Q99259 594 aa9.4□□□□□ -0.9
NEK9-206ENST00000555537 BCO2Q9BYV7 579 aa9.4□□□□□ -0.9
NEK9-206ENST00000555537 RHOBTB2Q9BYZ6 727 aa9.4□□□□□ -0.9
NEK9-206ENST00000555537 GPR62Q9BZJ7 368 aa9.4□□□□□ -0.9
NEK9-206ENST00000555537 ZMYND12Q9H0C1 365 aa9.4□□□□□ -0.9
NEK9-206ENST00000555537 C6orf50Q9HD87 102 aa9.4□□□□□ -0.9
NEK9-206ENST00000555537 PARD6AQ9NPB6 346 aa9.4□□□□□ -0.9
NEK9-206ENST00000555537 CHST7Q9NS84 486 aa9.4□□□□□ -0.9
NEK9-206ENST00000555537 BMP2KQ9NSY1 1161 aaPredicted RBP9.4□□□□□ -0.9
NEK9-206ENST00000555537 AGPAT5Q9NUQ2 364 aa9.4□□□□□ -0.9
NEK9-206ENST00000555537 CACNG4Q9UBN1 327 aa9.4□□□□□ -0.9
NEK9-206ENST00000555537 DPP7Q9UHL4 492 aa9.4□□□□□ -0.9
NEK9-206ENST00000555537 FBXO4Q9UKT5 387 aa9.4□□□□□ -0.9
NEK9-206ENST00000555537 SSX2IPQ9Y2D8 614 aa9.4□□□□□ -0.9
NEK9-206ENST00000555537 HES2Q9Y543 173 aa9.4□□□□□ -0.9
NEK9-206ENST00000555537 GTF3C3Q9Y5Q9 886 aa9.4□□□□□ -0.9
NEK9-206ENST00000555537 KLF18A0A0U1RQI7 1052 aa9.39□□□□□ -0.91
NEK9-206ENST00000555537 ARL5CA6NH57 179 aa9.39□□□□□ -0.91
NEK9-206ENST00000555537 ITGA4P13612 1032 aa9.39□□□□□ -0.91
NEK9-206ENST00000555537 SDHBP21912 280 aa9.39□□□□□ -0.91
NEK9-206ENST00000555537 SFNP31947 248 aa9.39□□□□□ -0.91
NEK9-206ENST00000555537 SCNN1GP51170 649 aa9.39□□□□□ -0.91
NEK9-206ENST00000555537 NPEPPSP55786 919 aa9.39□□□□□ -0.91
NEK9-206ENST00000555537 SPEM2Q0P670 501 aa9.39□□□□□ -0.91
NEK9-206ENST00000555537 AAMPQ13685 434 aa9.39□□□□□ -0.91
NEK9-206ENST00000555537 MLF2Q15773 248 aaPredicted RBP9.39□□□□□ -0.91
NEK9-206ENST00000555537 ZNF528Q3MIS6 628 aa9.39□□□□□ -0.91
NEK9-206ENST00000555537 ELMSAN1Q6PJG2 1045 aa9.39□□□□□ -0.91
NEK9-206ENST00000555537 PRSS55Q6UWB4 352 aaPredicted RBP9.39□□□□□ -0.91
NEK9-206ENST00000555537 ANO5Q75V66 913 aa9.39□□□□□ -0.91
NEK9-206ENST00000555537 REXO1Q8N1G1 1221 aaKnown RBP9.39□□□□□ -0.91
NEK9-206ENST00000555537 ZBTB44Q8NCP5 570 aa9.39□□□□□ -0.91
NEK9-206ENST00000555537 ITFG1Q8TB96 612 aa9.39□□□□□ -0.91
NEK9-206ENST00000555537 PRPF31Q8WWY3 499 aaKnown RBP9.39□□□□□ -0.91
NEK9-206ENST00000555537 RSPH1Q8WYR4 309 aa9.39□□□□□ -0.91
NEK9-206ENST00000555537 TMEM143Q96AN5 459 aa9.39□□□□□ -0.91
NEK9-206ENST00000555537 ZFP42Q96MM3 310 aa9.39□□□□□ -0.91
NEK9-206ENST00000555537 RIT2Q99578 217 aa9.39□□□□□ -0.91
NEK9-206ENST00000555537 DDX23Q9BUQ8 820 aaKnown RBP9.39□□□□□ -0.91
NEK9-206ENST00000555537 APOL6Q9BWW8 343 aa9.39□□□□□ -0.91
NEK9-206ENST00000555537 TEKT3Q9BXF9 490 aa9.39□□□□□ -0.91
NEK9-206ENST00000555537 EIF2AQ9BY44 585 aaKnown RBP9.39□□□□□ -0.91
NEK9-206ENST00000555537 PLEKHA4Q9H4M7 779 aa9.39□□□□□ -0.91
NEK9-206ENST00000555537 LTB4R2Q9NPC1 389 aa9.39□□□□□ -0.91
NEK9-206ENST00000555537 ZSCAN32Q9NX65 697 aa9.39□□□□□ -0.91
NEK9-206ENST00000555537 STK39Q9UEW8 545 aa9.39□□□□□ -0.91
NEK9-206ENST00000555537 SMG5Q9UPR3 1016 aaKnown RBP9.39□□□□□ -0.91
NEK9-206ENST00000555537 DOCK8Q8NF50 2099 aa9.39□□□□□ -0.91
NEK9-206ENST00000555537 DOCK6Q96HP0 2047 aa9.38□□□□□ -0.91
NEK9-206ENST00000555537 KMT2BQ9UMN6 2715 aaPredicted RBP9.38□□□□□ -0.91
NEK9-206ENST00000555537 PRR5-ARHGAP8B1AHC4 643 aa9.38□□□□□ -0.91
NEK9-206ENST00000555537 SPTLC1O15269 473 aa9.38□□□□□ -0.91
NEK9-206ENST00000555537 CCL16O15467 120 aa9.38□□□□□ -0.91
NEK9-206ENST00000555537 ZMYND10O75800 440 aa9.38□□□□□ -0.91
NEK9-206ENST00000555537 PSMD10O75832 226 aa9.38□□□□□ -0.91
NEK9-206ENST00000555537 PAPLNO95428 1278 aa9.38□□□□□ -0.91
NEK9-206ENST00000555537 ADRB1P08588 477 aa9.38□□□□□ -0.91
NEK9-206ENST00000555537 NCLP19338 710 aaKnown RBP9.38□□□□□ -0.91
NEK9-206ENST00000555537 TARSP26639 723 aaKnown RBP9.38□□□□□ -0.91
NEK9-206ENST00000555537 MLH1P40692 756 aa9.38□□□□□ -0.91
NEK9-206ENST00000555537 JAK3P52333 1124 aa9.38□□□□□ -0.91
NEK9-206ENST00000555537 ARHGAP8P85298 464 aa9.38□□□□□ -0.91
NEK9-206ENST00000555537 LMNB2Q03252 620 aa9.38□□□□□ -0.91
NEK9-206ENST00000555537 DSC1Q08554 894 aa9.38□□□□□ -0.91
NEK9-206ENST00000555537 ADCK5Q3MIX3 580 aa9.38□□□□□ -0.91
NEK9-206ENST00000555537 GPR161Q8N6U8 529 aaKnown RBP9.38□□□□□ -0.91
NEK9-206ENST00000555537 HDAC7Q8WUI4 952 aa9.38□□□□□ -0.91
NEK9-206ENST00000555537 FGF13Q92913 245 aa9.38□□□□□ -0.91
NEK9-206ENST00000555537 SECISBP2LQ93073 1101 aaKnown RBP9.38□□□□□ -0.91
NEK9-206ENST00000555537 CPB2Q96IY4 423 aa9.38□□□□□ -0.91
NEK9-206ENST00000555537 KXD1Q9BQD3 176 aa9.38□□□□□ -0.91
NEK9-206ENST00000555537 RTKNQ9BST9 563 aa9.38□□□□□ -0.91
NEK9-206ENST00000555537 COLEC11Q9BWP8 271 aa9.38□□□□□ -0.91
NEK9-206ENST00000555537 PLA2G2FQ9BZM2 168 aa9.38□□□□□ -0.91
NEK9-206ENST00000555537 ZDHHC7Q9NXF8 308 aa9.38□□□□□ -0.91
NEK9-206ENST00000555537 CDH7Q9ULB5 785 aa9.38□□□□□ -0.91
NEK9-206ENST00000555537 POLIQ9UNA4 740 aa9.38□□□□□ -0.91
NEK9-206ENST00000555537 IPPQ9Y573 584 aa9.38□□□□□ -0.91
NEK9-206ENST00000555537 PCDHGA2Q9Y5H1 932 aa9.38□□□□□ -0.91
NEK9-206ENST00000555537 COL4A3BPQ9Y5P4 624 aa9.38□□□□□ -0.91
NEK9-206ENST00000555537 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.38□□□□□ -0.91
NEK9-206ENST00000555537 CACNA1BQ00975 2339 aa9.38□□□□□ -0.91
NEK9-206ENST00000555537 NCOR2Q9Y618 2525 aa9.38□□□□□ -0.91
NEK9-206ENST00000555537 CNTNAP2Q9UHC6 1331 aa9.37□□□□□ -0.91
NEK9-206ENST00000555537 MYH15Q9Y2K3 1946 aa9.37□□□□□ -0.91
NEK9-206ENST00000555537 OTOGLQ3ZCN5 2332 aa9.37□□□□□ -0.91
NEK9-206ENST00000555537 ESYT2A0FGR8 921 aa9.37□□□□□ -0.91
NEK9-206ENST00000555537 EML1O00423 815 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms