RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 NT5DC3Q86UY8 548 aa26.27■■□□□ 1.8
TMEM260-207ENST00000555497 METTL13Q8N6R0 699 aa26.27■■□□□ 1.8
TMEM260-207ENST00000555497 THAP2Q9H0W7 228 aa26.27■■□□□ 1.8
TMEM260-207ENST00000555497 ARHGAP28Q9P2N2 729 aa26.27■■□□□ 1.8
TMEM260-207ENST00000555497 A0A0G2JMZ2 1700 aa26.27■■□□□ 1.8
TMEM260-207ENST00000555497 CES2O00748 559 aa26.27■■□□□ 1.8
TMEM260-207ENST00000555497 PEX26Q7Z412 305 aa26.27■■□□□ 1.8
TMEM260-207ENST00000555497 DAAM2Q86T65 1068 aa26.27■■□□□ 1.8
TMEM260-207ENST00000555497 RFFLQ8WZ73 363 aa26.27■■□□□ 1.8
TMEM260-207ENST00000555497 FAM84AQ96KN4 292 aa26.27■■□□□ 1.8
TMEM260-207ENST00000555497 PLEKHA4Q9H4M7 779 aa26.27■■□□□ 1.8
TMEM260-207ENST00000555497 MAFBQ9Y5Q3 323 aaPredicted RBP26.27■■□□□ 1.8
TMEM260-207ENST00000555497 BUB1BO60566 1050 aaPredicted RBP26.26■■□□□ 1.79
TMEM260-207ENST00000555497 GLI1P08151 1106 aa26.26■■□□□ 1.79
TMEM260-207ENST00000555497 RIOX2Q8IUF8 465 aa26.26■■□□□ 1.79
TMEM260-207ENST00000555497 RUBCNQ92622 972 aa26.26■■□□□ 1.79
TMEM260-207ENST00000555497 VIPAS39Q9H9C1 493 aa26.26■■□□□ 1.79
TMEM260-207ENST00000555497 ADARB2Q9NS39 739 aaKnown RBP26.26■■□□□ 1.79
TMEM260-207ENST00000555497 TMEM59LQ9UK28 342 aa26.26■■□□□ 1.79
TMEM260-207ENST00000555497 SOWAHBA6NEL2 793 aa26.26■■□□□ 1.79
TMEM260-207ENST00000555497 HNRNPDLO14979 420 aaKnown RBP26.26■■□□□ 1.79
TMEM260-207ENST00000555497 SGPL1O95470 568 aa26.26■■□□□ 1.79
TMEM260-207ENST00000555497 PPATQ06203 517 aa26.26■■□□□ 1.79
TMEM260-207ENST00000555497 CYP24A1Q07973 514 aa26.26■■□□□ 1.79
TMEM260-207ENST00000555497 EMC2Q15006 297 aa26.26■■□□□ 1.79
TMEM260-207ENST00000555497 KRT39Q6A163 491 aa26.26■■□□□ 1.79
TMEM260-207ENST00000555497 GADL1Q6ZQY3 521 aa26.26■■□□□ 1.79
TMEM260-207ENST00000555497 LMBR1Q8WVP7 490 aa26.26■■□□□ 1.79
TMEM260-207ENST00000555497 TMEM143Q96AN5 459 aa26.26■■□□□ 1.79
TMEM260-207ENST00000555497 PBKQ96KB5 322 aa26.26■■□□□ 1.79
TMEM260-207ENST00000555497 KRT12Q99456 494 aa26.26■■□□□ 1.79
TMEM260-207ENST00000555497 ACP6Q9NPH0 428 aa26.26■■□□□ 1.79
TMEM260-207ENST00000555497 ZNF302Q9NR11 478 aa26.26■■□□□ 1.79
TMEM260-207ENST00000555497 SUCLA2Q9P2R7 463 aaPredicted RBP26.26■■□□□ 1.79
TMEM260-207ENST00000555497 COQ4Q9Y3A0 265 aa26.26■■□□□ 1.79
TMEM260-207ENST00000555497 CSADQ9Y600 493 aa26.26■■□□□ 1.79
TMEM260-207ENST00000555497 IRF6O14896 467 aa26.25■■□□□ 1.79
TMEM260-207ENST00000555497 USP8P40818 1118 aa26.25■■□□□ 1.79
TMEM260-207ENST00000555497 GLE1Q53GS7 698 aaKnown RBP26.25■■□□□ 1.79
TMEM260-207ENST00000555497 TMC2Q8TDI7 906 aa26.25■■□□□ 1.79
TMEM260-207ENST00000555497 TAS1R2Q8TE23 839 aa26.25■■□□□ 1.79
TMEM260-207ENST00000555497 CTNNBL1Q8WYA6 563 aaPredicted RBP26.25■■□□□ 1.79
TMEM260-207ENST00000555497 ELP3Q9H9T3 547 aa26.25■■□□□ 1.79
TMEM260-207ENST00000555497 TMEM8AQ9HCN3 771 aa26.25■■□□□ 1.79
TMEM260-207ENST00000555497 COG5Q9UP83 839 aa26.25■■□□□ 1.79
TMEM260-207ENST00000555497 ZSCAN5CA6NGD5 496 aaPredicted RBP26.24■■□□□ 1.79
TMEM260-207ENST00000555497 CEP104O60308 925 aa26.24■■□□□ 1.79
TMEM260-207ENST00000555497 CHRNB2P17787 502 aa26.24■■□□□ 1.79
TMEM260-207ENST00000555497 GPS2Q13227 327 aa26.24■■□□□ 1.79
TMEM260-207ENST00000555497 ZNF771Q7L3S4 317 aaPredicted RBP26.24■■□□□ 1.79
TMEM260-207ENST00000555497 FAM71AQ8IYT1 594 aa26.24■■□□□ 1.79
TMEM260-207ENST00000555497 RPUSD2Q8IZ73 545 aaKnown RBP26.24■■□□□ 1.79
TMEM260-207ENST00000555497 PPM1KQ8N3J5 372 aa26.24■■□□□ 1.79
TMEM260-207ENST00000555497 DCPSQ96C86 337 aaKnown RBP26.24■■□□□ 1.79
TMEM260-207ENST00000555497 CLMNQ96JQ2 1002 aa26.24■■□□□ 1.79
TMEM260-207ENST00000555497 IFT74Q96LB3 600 aa26.24■■□□□ 1.79
TMEM260-207ENST00000555497 BRDTQ58F21 947 aaPredicted RBP26.24■■□□□ 1.79
TMEM260-207ENST00000555497 MOB2Q70IA6 237 aa26.24■■□□□ 1.79
TMEM260-207ENST00000555497 NOP9Q86U38 636 aaKnown RBP26.24■■□□□ 1.79
TMEM260-207ENST00000555497 HELQQ8TDG4 1101 aa26.24■■□□□ 1.79
TMEM260-207ENST00000555497 CCDC102AQ96A19 550 aa26.24■■□□□ 1.79
TMEM260-207ENST00000555497 VTI1AQ96AJ9 217 aa26.24■■□□□ 1.79
TMEM260-207ENST00000555497 HES6Q96HZ4 224 aa26.24■■□□□ 1.79
TMEM260-207ENST00000555497 CEP89Q96ST8 783 aa26.24■■□□□ 1.79
TMEM260-207ENST00000555497 PCDHB18PQ96TA0 734 aa26.24■■□□□ 1.79
TMEM260-207ENST00000555497 PCYT2Q99447 389 aa26.24■■□□□ 1.79
TMEM260-207ENST00000555497 SPATC1LQ9H0A9 340 aa26.24■■□□□ 1.79
TMEM260-207ENST00000555497 ANKRD62A6NC57 917 aa26.23■■□□□ 1.79
TMEM260-207ENST00000555497 OATP04181 439 aa26.23■■□□□ 1.79
TMEM260-207ENST00000555497 UBA1P22314 1058 aaKnown RBP26.23■■□□□ 1.79
TMEM260-207ENST00000555497 POLGP54098 1239 aaPredicted RBP26.23■■□□□ 1.79
TMEM260-207ENST00000555497 SULF1Q8IWU6 871 aa26.23■■□□□ 1.79
TMEM260-207ENST00000555497 GPD1LQ8N335 351 aa26.23■■□□□ 1.79
TMEM260-207ENST00000555497 ACTRT1Q8TDG2 376 aa26.23■■□□□ 1.79
TMEM260-207ENST00000555497 ASAP3Q8TDY4 903 aa26.23■■□□□ 1.79
TMEM260-207ENST00000555497 FAM213AQ9BRX8 229 aa26.23■■□□□ 1.79
TMEM260-207ENST00000555497 NOCTQ9UK39 431 aaKnown RBP26.23■■□□□ 1.79
TMEM260-207ENST00000555497 GSTTP1A0A1W2PQM5 241 aa26.23■■□□□ 1.79
TMEM260-207ENST00000555497 CYP26A1O43174 497 aa26.23■■□□□ 1.79
TMEM260-207ENST00000555497 GPC3P51654 580 aa26.23■■□□□ 1.79
TMEM260-207ENST00000555497 SV2AQ7L0J3 742 aa26.23■■□□□ 1.79
TMEM260-207ENST00000555497 NCAPG2Q86XI2 1143 aa26.23■■□□□ 1.79
TMEM260-207ENST00000555497 SYCE1Q8N0S2 351 aa26.23■■□□□ 1.79
TMEM260-207ENST00000555497 EPS8L1Q8TE68 723 aa26.23■■□□□ 1.79
TMEM260-207ENST00000555497 SCFD2Q8WU76 684 aa26.23■■□□□ 1.79
TMEM260-207ENST00000555497 BICD1Q96G01 975 aa26.23■■□□□ 1.79
TMEM260-207ENST00000555497 OTUD5Q96G74 571 aa26.23■■□□□ 1.79
TMEM260-207ENST00000555497 IGKV6D-21A0A0A0MT36 114 aa26.22■■□□□ 1.79
TMEM260-207ENST00000555497 DLATP10515 647 aaKnown RBP26.22■■□□□ 1.79
TMEM260-207ENST00000555497 GARTP22102 1010 aa26.22■■□□□ 1.79
TMEM260-207ENST00000555497 EDNRBP24530 442 aa26.22■■□□□ 1.79
TMEM260-207ENST00000555497 PRPF4BQ13523 1007 aaKnown RBP26.22■■□□□ 1.79
TMEM260-207ENST00000555497 SND1Q7KZF4 910 aaKnown RBP eCLIP26.22■■□□□ 1.79
TMEM260-207ENST00000555497 SHC3Q92529 594 aa26.22■■□□□ 1.79
TMEM260-207ENST00000555497 ISCUQ9H1K1 167 aa26.22■■□□□ 1.79
TMEM260-207ENST00000555497 DHX33Q9H6R0 707 aaKnown RBP26.22■■□□□ 1.79
TMEM260-207ENST00000555497 FAN1Q9Y2M0 1017 aa26.22■■□□□ 1.79
TMEM260-207ENST00000555497 SYF2O95926 243 aaKnown RBP26.22■■□□□ 1.79
TMEM260-207ENST00000555497 FTLP02792 175 aaPredicted RBP26.22■■□□□ 1.79
TMEM260-207ENST00000555497 TNFRSF8P28908 595 aa26.22■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms