RNA–Protein interactions for RNA: ENST00000555451.1

XRCC3-213, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 3

Gene XRCC3, Length 409 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-213ENST00000555451 SETD4Q9NVD3 440 aa12.15□□□□□ -0.46
XRCC3-213ENST00000555451 DDX20Q9UHI6 824 aaKnown RBP12.15□□□□□ -0.46
XRCC3-213ENST00000555451 AKT3Q9Y243 479 aa12.15□□□□□ -0.46
XRCC3-213ENST00000555451 KIAA0100Q14667 2235 aaKnown RBP12.15□□□□□ -0.46
XRCC3-213ENST00000555451 SCN10AQ9Y5Y9 1956 aa12.14□□□□□ -0.47
XRCC3-213ENST00000555451 C17orf102A2RUQ5 167 aa12.14□□□□□ -0.47
XRCC3-213ENST00000555451 GTPBP10A4D1E9 387 aaKnown RBP12.14□□□□□ -0.47
XRCC3-213ENST00000555451 MYADML2A6NDP7 307 aa12.14□□□□□ -0.47
XRCC3-213ENST00000555451 MFAP3LO75121 409 aa12.14□□□□□ -0.47
XRCC3-213ENST00000555451 GYPCP04921 128 aa12.14□□□□□ -0.47
XRCC3-213ENST00000555451 SRGAP2CP0DJJ0 459 aa12.14□□□□□ -0.47
XRCC3-213ENST00000555451 TRIM21P19474 475 aaKnown RBP12.14□□□□□ -0.47
XRCC3-213ENST00000555451 ADSSP30520 456 aa12.14□□□□□ -0.47
XRCC3-213ENST00000555451 HOXC8P31273 242 aa12.14□□□□□ -0.47
XRCC3-213ENST00000555451 MCCD1P59942 119 aaPredicted RBP12.14□□□□□ -0.47
XRCC3-213ENST00000555451 IRX5P78411 483 aaPredicted RBP12.14□□□□□ -0.47
XRCC3-213ENST00000555451 ADAM17P78536 824 aa12.14□□□□□ -0.47
XRCC3-213ENST00000555451 RBL2Q08999 1139 aa12.14□□□□□ -0.47
XRCC3-213ENST00000555451 FAM187BQ17R55 369 aa12.14□□□□□ -0.47
XRCC3-213ENST00000555451 LHX8Q68G74 356 aa12.14□□□□□ -0.47
XRCC3-213ENST00000555451 UBE2Q1Q7Z7E8 422 aa12.14□□□□□ -0.47
XRCC3-213ENST00000555451 ZNF710Q8N1W2 664 aa12.14□□□□□ -0.47
XRCC3-213ENST00000555451 PCSK9Q8NBP7 692 aaKnown RBP12.14□□□□□ -0.47
XRCC3-213ENST00000555451 FBXL18Q96ME1 805 aa12.14□□□□□ -0.47
XRCC3-213ENST00000555451 TARS2Q9BW92 718 aaKnown RBP12.14□□□□□ -0.47
XRCC3-213ENST00000555451 FZD8Q9H461 694 aa12.14□□□□□ -0.47
XRCC3-213ENST00000555451 PRMT7Q9NVM4 692 aaPredicted RBP12.14□□□□□ -0.47
XRCC3-213ENST00000555451 OGDHLQ9ULD0 1010 aa12.14□□□□□ -0.47
XRCC3-213ENST00000555451 SIK3Q9Y2K2 1263 aa12.14□□□□□ -0.47
XRCC3-213ENST00000555451 A0A1W2PQJ5 194 aa12.13□□□□□ -0.47
XRCC3-213ENST00000555451 ESPNB1AK53 854 aa12.13□□□□□ -0.47
XRCC3-213ENST00000555451 INO80B-WBP1J3KQ70 363 aa12.13□□□□□ -0.47
XRCC3-213ENST00000555451 ACKR2O00590 384 aa12.13□□□□□ -0.47
XRCC3-213ENST00000555451 P4HA2O15460 535 aa12.13□□□□□ -0.47
XRCC3-213ENST00000555451 EXTL3O43909 919 aa12.13□□□□□ -0.47
XRCC3-213ENST00000555451 STX10O60499 249 aa12.13□□□□□ -0.47
XRCC3-213ENST00000555451 N4BP1O75113 896 aaKnown RBP12.13□□□□□ -0.47
XRCC3-213ENST00000555451 TOM1L1O75674 476 aa12.13□□□□□ -0.47
XRCC3-213ENST00000555451 PGK1P00558 417 aa12.13□□□□□ -0.47
XRCC3-213ENST00000555451 TFRCP02786 760 aaKnown RBP12.13□□□□□ -0.47
XRCC3-213ENST00000555451 CYP2C9P11712 490 aa12.13□□□□□ -0.47
XRCC3-213ENST00000555451 CASP14P31944 242 aa12.13□□□□□ -0.47
XRCC3-213ENST00000555451 GPC3P51654 580 aa12.13□□□□□ -0.47
XRCC3-213ENST00000555451 VAMP7P51809 220 aa12.13□□□□□ -0.47
XRCC3-213ENST00000555451 CHMP4BP1P59074 171 aa12.13□□□□□ -0.47
XRCC3-213ENST00000555451 CCZ1BP86790 482 aa12.13□□□□□ -0.47
XRCC3-213ENST00000555451 CCZ1P86791 482 aaPredicted RBP12.13□□□□□ -0.47
XRCC3-213ENST00000555451 MBTD1Q05BQ5 628 aa12.13□□□□□ -0.47
XRCC3-213ENST00000555451 ARID5BQ14865 1188 aa12.13□□□□□ -0.47
XRCC3-213ENST00000555451 SNRNP35Q16560 246 aaKnown RBP12.13□□□□□ -0.47
XRCC3-213ENST00000555451 SRGAP1Q7Z6B7 1085 aa12.13□□□□□ -0.47
XRCC3-213ENST00000555451 KIAA0319LQ8IZA0 1049 aa12.13□□□□□ -0.47
XRCC3-213ENST00000555451 C7orf31Q8N865 590 aa12.13□□□□□ -0.47
XRCC3-213ENST00000555451 TC2NQ8N9U0 490 aa12.13□□□□□ -0.47
XRCC3-213ENST00000555451 KLHDC9Q8NEP7 349 aa12.13□□□□□ -0.47
XRCC3-213ENST00000555451 NEK11Q8NG66 645 aa12.13□□□□□ -0.47
XRCC3-213ENST00000555451 TMC2Q8TDI7 906 aa12.13□□□□□ -0.47
XRCC3-213ENST00000555451 ZBTB10Q96DT7 871 aa12.13□□□□□ -0.47
XRCC3-213ENST00000555451 PRIMPOLQ96LW4 560 aa12.13□□□□□ -0.47
XRCC3-213ENST00000555451 ZNF830Q96NB3 372 aaPredicted RBP12.13□□□□□ -0.47
XRCC3-213ENST00000555451 PANX2Q96RD6 677 aa12.13□□□□□ -0.47
XRCC3-213ENST00000555451 EDEM3Q9BZQ6 932 aa12.13□□□□□ -0.47
XRCC3-213ENST00000555451 INO80BQ9C086 356 aaPredicted RBP12.13□□□□□ -0.47
XRCC3-213ENST00000555451 TTYH3Q9C0H2 523 aa12.13□□□□□ -0.47
XRCC3-213ENST00000555451 IFT122Q9HBG6 1241 aa12.13□□□□□ -0.47
XRCC3-213ENST00000555451 CAPN11Q9UMQ6 739 aa12.13□□□□□ -0.47
XRCC3-213ENST00000555451 FRMPD3Q5JV73 1810 aa12.12□□□□□ -0.47
XRCC3-213ENST00000555451 A0A087WZ62 844 aa12.12□□□□□ -0.47
XRCC3-213ENST00000555451 A0A0B4J269 797 aa12.12□□□□□ -0.47
XRCC3-213ENST00000555451 ZNF233A6NK53 670 aa12.12□□□□□ -0.47
XRCC3-213ENST00000555451 CLDN3O15551 220 aa12.12□□□□□ -0.47
XRCC3-213ENST00000555451 CABYRO75952 493 aa12.12□□□□□ -0.47
XRCC3-213ENST00000555451 VTNP04004 478 aa12.12□□□□□ -0.47
XRCC3-213ENST00000555451 RPLP2P05387 115 aaKnown RBP12.12□□□□□ -0.47
XRCC3-213ENST00000555451 ADRB2P07550 413 aa12.12□□□□□ -0.47
XRCC3-213ENST00000555451 SKILP12757 684 aa12.12□□□□□ -0.47
XRCC3-213ENST00000555451 MATR3P43243 847 aaKnown RBP eCLIP12.12□□□□□ -0.47
XRCC3-213ENST00000555451 FMO5P49326 533 aa12.12□□□□□ -0.47
XRCC3-213ENST00000555451 FXR1P51114 621 aaKnown RBP eCLIP12.12□□□□□ -0.47
XRCC3-213ENST00000555451 KCNMA1Q12791 1236 aa12.12□□□□□ -0.47
XRCC3-213ENST00000555451 LRMPQ12912 555 aa12.12□□□□□ -0.47
XRCC3-213ENST00000555451 PRPF4BQ13523 1007 aaKnown RBP12.12□□□□□ -0.47
XRCC3-213ENST00000555451 PCBP1Q15365 356 aaKnown RBP eCLIP12.12□□□□□ -0.47
XRCC3-213ENST00000555451 TAF2Q6P1X5 1199 aa12.12□□□□□ -0.47
XRCC3-213ENST00000555451 GBP6Q6ZN66 633 aa12.12□□□□□ -0.47
XRCC3-213ENST00000555451 RNF180Q86T96 592 aa12.12□□□□□ -0.47
XRCC3-213ENST00000555451 CBWD2Q8IUF1 395 aa12.12□□□□□ -0.47
XRCC3-213ENST00000555451 ANKLE1Q8NAG6 615 aa12.12□□□□□ -0.47
XRCC3-213ENST00000555451 RDH13Q8NBN7 331 aa12.12□□□□□ -0.47
XRCC3-213ENST00000555451 ZNF397Q8NF99 534 aaPredicted RBP12.12□□□□□ -0.47
XRCC3-213ENST00000555451 NLRP7Q8WX94 980 aa12.12□□□□□ -0.47
XRCC3-213ENST00000555451 SAAL1Q96ER3 474 aa12.12□□□□□ -0.47
XRCC3-213ENST00000555451 MFSD14AQ96MC6 490 aa12.12□□□□□ -0.47
XRCC3-213ENST00000555451 SCLT1Q96NL6 688 aa12.12□□□□□ -0.47
XRCC3-213ENST00000555451 ACO2Q99798 780 aaKnown RBP12.12□□□□□ -0.47
XRCC3-213ENST00000555451 FDXACB1Q9BRP7 624 aaPredicted RBP12.12□□□□□ -0.47
XRCC3-213ENST00000555451 NAA15Q9BXJ9 866 aaKnown RBP12.12□□□□□ -0.47
XRCC3-213ENST00000555451 TMX1Q9H3N1 280 aa12.12□□□□□ -0.47
XRCC3-213ENST00000555451 MMRN2Q9H8L6 949 aa12.12□□□□□ -0.47
XRCC3-213ENST00000555451 ABHD10Q9NUJ1 306 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms