RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 FAM124AQ86V42 546 aa6.92□□□□□ -1.3
CKS1BP1-201ENST00000555221 DENND1CQ8IV53 801 aa6.92□□□□□ -1.3
CKS1BP1-201ENST00000555221 POU5F2Q8N7G0 328 aa6.92□□□□□ -1.3
CKS1BP1-201ENST00000555221 ACO2Q99798 780 aaKnown RBP6.92□□□□□ -1.3
CKS1BP1-201ENST00000555221 KIAA1683Q9H0B3 1180 aa6.92□□□□□ -1.3
CKS1BP1-201ENST00000555221 MANSC1Q9H8J5 431 aa6.92□□□□□ -1.3
CKS1BP1-201ENST00000555221 FAM204AQ9H8W3 233 aa6.92□□□□□ -1.3
CKS1BP1-201ENST00000555221 JADE2Q9NQC1 790 aa6.92□□□□□ -1.3
CKS1BP1-201ENST00000555221 KMT5AQ9NQR1 393 aa6.92□□□□□ -1.3
CKS1BP1-201ENST00000555221 MAN1C1Q9NR34 630 aa6.92□□□□□ -1.3
CKS1BP1-201ENST00000555221 SLC52A1Q9NWF4 448 aa6.92□□□□□ -1.3
CKS1BP1-201ENST00000555221 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.92□□□□□ -1.3
CKS1BP1-201ENST00000555221 ZDHHC9Q9Y397 364 aa6.92□□□□□ -1.3
CKS1BP1-201ENST00000555221 RBM8AQ9Y5S9 174 aaKnown RBP6.92□□□□□ -1.3
CKS1BP1-201ENST00000555221 C2orf78A6NCI8 922 aa6.91□□□□□ -1.3
CKS1BP1-201ENST00000555221 NPIPB6E9PJ23 425 aa6.91□□□□□ -1.3
CKS1BP1-201ENST00000555221 GASTP01350 101 aa6.91□□□□□ -1.3
CKS1BP1-201ENST00000555221 ZNF888P0CJ79 500 aaPredicted RBP6.91□□□□□ -1.3
CKS1BP1-201ENST00000555221 ADSLP30566 484 aaPredicted RBP6.91□□□□□ -1.3
CKS1BP1-201ENST00000555221 KIR2DL3P43628 341 aa6.91□□□□□ -1.3
CKS1BP1-201ENST00000555221 RRADP55042 308 aa6.91□□□□□ -1.3
CKS1BP1-201ENST00000555221 PER3P56645 1201 aa6.91□□□□□ -1.3
CKS1BP1-201ENST00000555221 MAP9Q49MG5 647 aa6.91□□□□□ -1.3
CKS1BP1-201ENST00000555221 ZNF648Q5T619 568 aaPredicted RBP6.91□□□□□ -1.3
CKS1BP1-201ENST00000555221 KSR2Q6VAB6 950 aa6.91□□□□□ -1.3
CKS1BP1-201ENST00000555221 USP30Q70CQ3 517 aa6.91□□□□□ -1.3
CKS1BP1-201ENST00000555221 SRGAP1Q7Z6B7 1085 aa6.91□□□□□ -1.3
CKS1BP1-201ENST00000555221 RHOT1Q8IXI2 618 aa6.91□□□□□ -1.3
CKS1BP1-201ENST00000555221 ZBTB34Q8NCN2 500 aa6.91□□□□□ -1.3
CKS1BP1-201ENST00000555221 OR2I1PQ8NGU4 316 aa6.91□□□□□ -1.3
CKS1BP1-201ENST00000555221 HOXB13Q92826 284 aaPredicted RBP6.91□□□□□ -1.3
CKS1BP1-201ENST00000555221 CYFIP2Q96F07 1278 aa6.91□□□□□ -1.3
CKS1BP1-201ENST00000555221 BCO1Q9HAY6 547 aa6.91□□□□□ -1.3
CKS1BP1-201ENST00000555221 A0A1B0GTL3 188 aa6.9□□□□□ -1.3
CKS1BP1-201ENST00000555221 NRP1O14786 923 aa6.9□□□□□ -1.3
CKS1BP1-201ENST00000555221 SLC16A6O15403 523 aa6.9□□□□□ -1.3
CKS1BP1-201ENST00000555221 JUNP05412 331 aaKnown RBP6.9□□□□□ -1.3
CKS1BP1-201ENST00000555221 TRIM27P14373 513 aa6.9□□□□□ -1.3
CKS1BP1-201ENST00000555221 CDC42EP1Q00587 391 aa6.9□□□□□ -1.3
CKS1BP1-201ENST00000555221 HDAC1Q13547 482 aaPredicted RBP6.9□□□□□ -1.3
CKS1BP1-201ENST00000555221 IL10RAQ13651 578 aa6.9□□□□□ -1.3
CKS1BP1-201ENST00000555221 SEPT2Q15019 361 aa6.9□□□□□ -1.3
CKS1BP1-201ENST00000555221 GAGE13Q4V321 117 aa6.9□□□□□ -1.3
CKS1BP1-201ENST00000555221 TCERG1LQ5VWI1 586 aa6.9□□□□□ -1.3
CKS1BP1-201ENST00000555221 CHST15Q7LFX5 561 aaPredicted RBP6.9□□□□□ -1.3
CKS1BP1-201ENST00000555221 GPR155Q7Z3F1 870 aa6.9□□□□□ -1.3
CKS1BP1-201ENST00000555221 ZNF761Q86XN6 746 aaPredicted RBP6.9□□□□□ -1.3
CKS1BP1-201ENST00000555221 DRC7Q8IY82 874 aa6.9□□□□□ -1.3
CKS1BP1-201ENST00000555221 ADGRG2Q8IZP9 1017 aa6.9□□□□□ -1.3
CKS1BP1-201ENST00000555221 MSL3Q8N5Y2 521 aaKnown RBP6.9□□□□□ -1.3
CKS1BP1-201ENST00000555221 OR7D4Q8NG98 312 aa6.9□□□□□ -1.3
CKS1BP1-201ENST00000555221 TIFAQ96CG3 184 aa6.9□□□□□ -1.3
CKS1BP1-201ENST00000555221 UHRF1Q96T88 793 aaPredicted RBP6.9□□□□□ -1.3
CKS1BP1-201ENST00000555221 SARGQ9BW04 601 aa6.9□□□□□ -1.3
CKS1BP1-201ENST00000555221 SLC6A15Q9H2J7 730 aa6.9□□□□□ -1.3
CKS1BP1-201ENST00000555221 TLR9Q9NR96 1032 aa6.9□□□□□ -1.3
CKS1BP1-201ENST00000555221 TDP1Q9NUW8 608 aa6.9□□□□□ -1.3
CKS1BP1-201ENST00000555221 DDX20Q9UHI6 824 aaKnown RBP6.9□□□□□ -1.3
CKS1BP1-201ENST00000555221 PCDHA13Q9Y5I0 950 aa6.9□□□□□ -1.3
CKS1BP1-201ENST00000555221 MROH6A6NGR9 719 aa6.89□□□□□ -1.31
CKS1BP1-201ENST00000555221 FAM227AF5H4B4 570 aa6.89□□□□□ -1.31
CKS1BP1-201ENST00000555221 NUAK1O60285 661 aa6.89□□□□□ -1.31
CKS1BP1-201ENST00000555221 TOX4O94842 621 aa6.89□□□□□ -1.31
CKS1BP1-201ENST00000555221 VSIG10L2P0DP72 767 aa6.89□□□□□ -1.31
CKS1BP1-201ENST00000555221 GYPEP15421 78 aa6.89□□□□□ -1.31
CKS1BP1-201ENST00000555221 CRHR1P34998 444 aa6.89□□□□□ -1.31
CKS1BP1-201ENST00000555221 FXR1P51114 621 aaKnown RBP eCLIP6.89□□□□□ -1.31
CKS1BP1-201ENST00000555221 DUSP2Q05923 314 aa6.89□□□□□ -1.31
CKS1BP1-201ENST00000555221 KIAA2012Q0VF49 1180 aa6.89□□□□□ -1.31
CKS1BP1-201ENST00000555221 KRT40Q6A162 431 aa6.89□□□□□ -1.31
CKS1BP1-201ENST00000555221 PPP4R4Q6NUP7 873 aa6.89□□□□□ -1.31
CKS1BP1-201ENST00000555221 Q6ZVL8 140 aa6.89□□□□□ -1.31
CKS1BP1-201ENST00000555221 FBXO41Q8TF61 875 aa6.89□□□□□ -1.31
CKS1BP1-201ENST00000555221 KAT5Q92993 513 aa6.89□□□□□ -1.31
CKS1BP1-201ENST00000555221 MBD6Q96DN6 1003 aa6.89□□□□□ -1.31
CKS1BP1-201ENST00000555221 TMEM60Q9H2L4 133 aa6.89□□□□□ -1.31
CKS1BP1-201ENST00000555221 GPRC5DQ9NZD1 345 aa6.89□□□□□ -1.31
CKS1BP1-201ENST00000555221 PTPN22Q9Y2R2 807 aa6.89□□□□□ -1.31
CKS1BP1-201ENST00000555221 ARHGAP6O43182 974 aa6.88□□□□□ -1.31
CKS1BP1-201ENST00000555221 B3GALT2O43825 422 aa6.88□□□□□ -1.31
CKS1BP1-201ENST00000555221 TUSC2O75896 110 aa6.88□□□□□ -1.31
CKS1BP1-201ENST00000555221 ADCY7P51828 1080 aa6.88□□□□□ -1.31
CKS1BP1-201ENST00000555221 BPIFB4P59827 614 aa6.88□□□□□ -1.31
CKS1BP1-201ENST00000555221 DSC2Q02487 901 aa6.88□□□□□ -1.31
CKS1BP1-201ENST00000555221 NFYCQ13952 458 aa6.88□□□□□ -1.31
CKS1BP1-201ENST00000555221 CIAPIN1Q6FI81 312 aa6.88□□□□□ -1.31
CKS1BP1-201ENST00000555221 OVCH2Q7RTZ1 564 aa6.88□□□□□ -1.31
CKS1BP1-201ENST00000555221 KBTBD2Q8IY47 623 aa6.88□□□□□ -1.31
CKS1BP1-201ENST00000555221 FAM43AQ8N2R8 423 aa6.88□□□□□ -1.31
CKS1BP1-201ENST00000555221 PQLC1Q8N2U9 271 aa6.88□□□□□ -1.31
CKS1BP1-201ENST00000555221 TP53I13Q8NBR0 393 aaPredicted RBP6.88□□□□□ -1.31
CKS1BP1-201ENST00000555221 NSUN6Q8TEA1 469 aaKnown RBP6.88□□□□□ -1.31
CKS1BP1-201ENST00000555221 RGMAQ96B86 450 aa6.88□□□□□ -1.31
CKS1BP1-201ENST00000555221 LANCL2Q9NS86 450 aa6.88□□□□□ -1.31
CKS1BP1-201ENST00000555221 ING3Q9NXR8 418 aa6.88□□□□□ -1.31
CKS1BP1-201ENST00000555221 TRPS1Q9UHF7 1281 aa6.88□□□□□ -1.31
CKS1BP1-201ENST00000555221 POLHQ9Y253 713 aa6.88□□□□□ -1.31
CKS1BP1-201ENST00000555221 PCDHB1Q9Y5F3 818 aa6.88□□□□□ -1.31
CKS1BP1-201ENST00000555221 UBXN7O94888 489 aa6.87□□□□□ -1.31
CKS1BP1-201ENST00000555221 ARIH2O95376 493 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms