RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 STXBP4Q6ZWJ1 553 aa11.79□□□□□ -0.52
TDP1-211ENST00000555178 TMEM192Q8IY95 271 aa11.79□□□□□ -0.52
TDP1-211ENST00000555178 CEP120Q8N960 986 aa11.79□□□□□ -0.52
TDP1-211ENST00000555178 TRIM43Q96BQ3 446 aaPredicted RBP11.79□□□□□ -0.52
TDP1-211ENST00000555178 NOC4LQ9BVI4 516 aaKnown RBP11.79□□□□□ -0.52
TDP1-211ENST00000555178 TRIM5Q9C035 493 aa11.79□□□□□ -0.52
TDP1-211ENST00000555178 XPO4Q9C0E2 1151 aaKnown RBP11.79□□□□□ -0.52
TDP1-211ENST00000555178 TMEM134Q9H6X4 195 aa11.79□□□□□ -0.52
TDP1-211ENST00000555178 TRPV2Q9Y5S1 764 aa11.79□□□□□ -0.52
TDP1-211ENST00000555178 CCDC85CA6NKD9 419 aa11.78□□□□□ -0.52
TDP1-211ENST00000555178 MEFVO15553 781 aaPredicted RBP11.78□□□□□ -0.52
TDP1-211ENST00000555178 MGEA5O60502 916 aa11.78□□□□□ -0.52
TDP1-211ENST00000555178 NBNO60934 754 aa11.78□□□□□ -0.52
TDP1-211ENST00000555178 AKAP3O75969 853 aa11.78□□□□□ -0.52
TDP1-211ENST00000555178 SERPINC1P01008 464 aa11.78□□□□□ -0.52
TDP1-211ENST00000555178 CD52P31358 61 aa11.78□□□□□ -0.52
TDP1-211ENST00000555178 PHKA2P46019 1235 aa11.78□□□□□ -0.52
TDP1-211ENST00000555178 CRYBB1P53674 252 aaPredicted RBP11.78□□□□□ -0.52
TDP1-211ENST00000555178 TPM4P67936 248 aa11.78□□□□□ -0.52
TDP1-211ENST00000555178 ADAM9Q13443 819 aa11.78□□□□□ -0.52
TDP1-211ENST00000555178 TFDP1Q14186 410 aa11.78□□□□□ -0.52
TDP1-211ENST00000555178 SARM1Q6SZW1 724 aa11.78□□□□□ -0.52
TDP1-211ENST00000555178 ZBTB33Q86T24 672 aa11.78□□□□□ -0.52
TDP1-211ENST00000555178 RPAINQ86UA6 219 aa11.78□□□□□ -0.52
TDP1-211ENST00000555178 ZNF410Q86VK4 478 aa11.78□□□□□ -0.52
TDP1-211ENST00000555178 ZC3H3Q8IXZ2 948 aaKnown RBP11.78□□□□□ -0.52
TDP1-211ENST00000555178 NME8Q8N427 588 aa11.78□□□□□ -0.52
TDP1-211ENST00000555178 SAAL1Q96ER3 474 aa11.78□□□□□ -0.52
TDP1-211ENST00000555178 ACO2Q99798 780 aaKnown RBP11.78□□□□□ -0.52
TDP1-211ENST00000555178 TMX1Q9H3N1 280 aa11.78□□□□□ -0.52
TDP1-211ENST00000555178 THAP9Q9H5L6 903 aa11.78□□□□□ -0.52
TDP1-211ENST00000555178 RNF19AQ9NV58 838 aa11.78□□□□□ -0.52
TDP1-211ENST00000555178 PHLPP2Q6ZVD8 1323 aa11.78□□□□□ -0.52
TDP1-211ENST00000555178 HNRNPDLO14979 420 aaKnown RBP11.78□□□□□ -0.52
TDP1-211ENST00000555178 CALUO43852 315 aaPredicted RBP11.78□□□□□ -0.52
TDP1-211ENST00000555178 HARSP12081 509 aaKnown RBP11.78□□□□□ -0.52
TDP1-211ENST00000555178 ZNF75DP51815 510 aa11.78□□□□□ -0.52
TDP1-211ENST00000555178 FKBP3Q00688 224 aaKnown RBP11.78□□□□□ -0.52
TDP1-211ENST00000555178 ALCAMQ13740 583 aa11.78□□□□□ -0.52
TDP1-211ENST00000555178 EDRF1Q3B7T1 1238 aa11.78□□□□□ -0.52
TDP1-211ENST00000555178 FAM26DQ5JW98 314 aa11.78□□□□□ -0.52
TDP1-211ENST00000555178 FBXO47Q5MNV8 452 aa11.78□□□□□ -0.52
TDP1-211ENST00000555178 CEP135Q66GS9 1140 aa11.78□□□□□ -0.52
TDP1-211ENST00000555178 SCARA3Q6AZY7 606 aa11.78□□□□□ -0.52
TDP1-211ENST00000555178 NOC3LQ8WTT2 800 aaKnown RBP11.78□□□□□ -0.52
TDP1-211ENST00000555178 BICD1Q96G01 975 aa11.78□□□□□ -0.52
TDP1-211ENST00000555178 EIF2AQ9BY44 585 aaKnown RBP11.78□□□□□ -0.52
TDP1-211ENST00000555178 NFKBIZQ9BYH8 718 aa11.78□□□□□ -0.52
TDP1-211ENST00000555178 GCOM2Q9BZD3 368 aaPredicted RBP11.78□□□□□ -0.52
TDP1-211ENST00000555178 VPS16Q9H269 839 aa11.78□□□□□ -0.52
TDP1-211ENST00000555178 TMEM206Q9H813 350 aa11.78□□□□□ -0.52
TDP1-211ENST00000555178 TBX21Q9UL17 535 aa11.78□□□□□ -0.52
TDP1-211ENST00000555178 PTPRSQ13332 1948 aa11.77□□□□□ -0.52
TDP1-211ENST00000555178 ACKR2O00590 384 aa11.77□□□□□ -0.53
TDP1-211ENST00000555178 TEX33O43247 280 aa11.77□□□□□ -0.53
TDP1-211ENST00000555178 TNFSF9P41273 254 aa11.77□□□□□ -0.53
TDP1-211ENST00000555178 POU5F1BQ06416 359 aa11.77□□□□□ -0.53
TDP1-211ENST00000555178 MAPK6Q16659 721 aa11.77□□□□□ -0.53
TDP1-211ENST00000555178 C1orf53Q5VUE5 145 aa11.77□□□□□ -0.53
TDP1-211ENST00000555178 HS2ST1Q7LGA3 356 aa11.77□□□□□ -0.53
TDP1-211ENST00000555178 ZBTB8OSQ8IWT0 167 aa11.77□□□□□ -0.53
TDP1-211ENST00000555178 RDH13Q8NBN7 331 aa11.77□□□□□ -0.53
TDP1-211ENST00000555178 PLEKHO2Q8TD55 490 aa11.77□□□□□ -0.53
TDP1-211ENST00000555178 PDZD7Q9H5P4 517 aa11.77□□□□□ -0.53
TDP1-211ENST00000555178 PTPRHQ9HD43 1115 aa11.77□□□□□ -0.53
TDP1-211ENST00000555178 ANKFY1Q9P2R3 1169 aa11.77□□□□□ -0.53
TDP1-211ENST00000555178 ST3GAL5Q9UNP4 418 aa11.77□□□□□ -0.53
TDP1-211ENST00000555178 LTBP2Q14767 1821 aa11.77□□□□□ -0.53
TDP1-211ENST00000555178 FAM189A1O60320 539 aa11.76□□□□□ -0.53
TDP1-211ENST00000555178 UBASH3AP57075 661 aa11.76□□□□□ -0.53
TDP1-211ENST00000555178 NFX1Q12986 1120 aaKnown RBP11.76□□□□□ -0.53
TDP1-211ENST00000555178 STRN3Q13033 797 aa11.76□□□□□ -0.53
TDP1-211ENST00000555178 PRPF4BQ13523 1007 aaKnown RBP11.76□□□□□ -0.53
TDP1-211ENST00000555178 CRELD2Q6UXH1 353 aaPredicted RBP11.76□□□□□ -0.53
TDP1-211ENST00000555178 PPP4R3CPQ6ZMV5 832 aa11.76□□□□□ -0.53
TDP1-211ENST00000555178 LRRC8DQ7L1W4 858 aa11.76□□□□□ -0.53
TDP1-211ENST00000555178 CATSPER4Q7RTX7 472 aa11.76□□□□□ -0.53
TDP1-211ENST00000555178 SRGAP1Q7Z6B7 1085 aa11.76□□□□□ -0.53
TDP1-211ENST00000555178 RTN4RL1Q86UN2 441 aaPredicted RBP11.76□□□□□ -0.53
TDP1-211ENST00000555178 SLC17A8Q8NDX2 589 aa11.76□□□□□ -0.53
TDP1-211ENST00000555178 HVCN1Q96D96 273 aa11.76□□□□□ -0.53
TDP1-211ENST00000555178 HIPK3Q9H422 1215 aa11.76□□□□□ -0.53
TDP1-211ENST00000555178 DMAC2Q9NW81 257 aa11.76□□□□□ -0.53
TDP1-211ENST00000555178 PADI3Q9ULW8 664 aa11.76□□□□□ -0.53
TDP1-211ENST00000555178 HES2Q9Y543 173 aa11.76□□□□□ -0.53
TDP1-211ENST00000555178 MICAL3Q7RTP6 2002 aa11.76□□□□□ -0.53
TDP1-211ENST00000555178 MEIS3P2A8K0S8 358 aa11.76□□□□□ -0.53
TDP1-211ENST00000555178 DCDC2CA8MYV0 355 aa11.76□□□□□ -0.53
TDP1-211ENST00000555178 PIGRP01833 764 aa11.76□□□□□ -0.53
TDP1-211ENST00000555178 ADRB2P07550 413 aa11.76□□□□□ -0.53
TDP1-211ENST00000555178 PROZP22891 400 aa11.76□□□□□ -0.53
TDP1-211ENST00000555178 ACOT2P49753 483 aa11.76□□□□□ -0.53
TDP1-211ENST00000555178 LIG4P49917 911 aa11.76□□□□□ -0.53
TDP1-211ENST00000555178 EFNA5P52803 228 aa11.76□□□□□ -0.53
TDP1-211ENST00000555178 OSTNP61366 133 aa11.76□□□□□ -0.53
TDP1-211ENST00000555178 FAM187BQ17R55 369 aa11.76□□□□□ -0.53
TDP1-211ENST00000555178 UBXN11Q5T124 520 aa11.76□□□□□ -0.53
TDP1-211ENST00000555178 ATF7IP2Q5U623 682 aa11.76□□□□□ -0.53
TDP1-211ENST00000555178 ARMCX5Q6P1M9 558 aa11.76□□□□□ -0.53
TDP1-211ENST00000555178 LINC01599Q8WXQ3 324 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms