RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 NLRP11P59045 1033 aaKnown RBP7.28□□□□□ -1.24
SYNE2-216ENST00000555002 INPP5AQ14642 412 aa7.28□□□□□ -1.24
SYNE2-216ENST00000555002 FAM83BQ5T0W9 1011 aa7.28□□□□□ -1.24
SYNE2-216ENST00000555002 TRAF7Q6Q0C0 670 aa7.28□□□□□ -1.24
SYNE2-216ENST00000555002 USP33Q8TEY7 942 aa7.28□□□□□ -1.24
SYNE2-216ENST00000555002 SPATA33Q96N06 139 aa7.28□□□□□ -1.24
SYNE2-216ENST00000555002 ECT2Q9H8V3 914 aa7.28□□□□□ -1.24
SYNE2-216ENST00000555002 TOPORSQ9NS56 1045 aaPredicted RBP7.28□□□□□ -1.24
SYNE2-216ENST00000555002 SPASTQ9UBP0 616 aa7.28□□□□□ -1.24
SYNE2-216ENST00000555002 ZHX2Q9Y6X8 837 aa7.28□□□□□ -1.24
SYNE2-216ENST00000555002 LINC00854A0A1B0GVQ3 168 aa7.28□□□□□ -1.24
SYNE2-216ENST00000555002 SFI1A8K8P3 1242 aa7.28□□□□□ -1.24
SYNE2-216ENST00000555002 CAPN15O75808 1086 aa7.28□□□□□ -1.24
SYNE2-216ENST00000555002 KRT38O76015 456 aa7.28□□□□□ -1.24
SYNE2-216ENST00000555002 TOMM70O94826 608 aa7.28□□□□□ -1.24
SYNE2-216ENST00000555002 SERPING1P05155 500 aa7.28□□□□□ -1.24
SYNE2-216ENST00000555002 NFICP08651 508 aa7.28□□□□□ -1.24
SYNE2-216ENST00000555002 MZF1P28698 734 aaPredicted RBP7.28□□□□□ -1.24
SYNE2-216ENST00000555002 ABCD1P33897 745 aa7.28□□□□□ -1.24
SYNE2-216ENST00000555002 SCFD1Q8WVM8 642 aa7.28□□□□□ -1.24
SYNE2-216ENST00000555002 ELAC2Q9BQ52 826 aaKnown RBP7.28□□□□□ -1.24
SYNE2-216ENST00000555002 PITPNM3Q9BZ71 974 aa7.28□□□□□ -1.24
SYNE2-216ENST00000555002 CUEDC2Q9H467 287 aa7.28□□□□□ -1.24
SYNE2-216ENST00000555002 PLEKHA5Q9HAU0 1116 aa7.28□□□□□ -1.24
SYNE2-216ENST00000555002 DIABLOQ9NR28 239 aa7.28□□□□□ -1.24
SYNE2-216ENST00000555002 ZC3H7BQ9UGR2 993 aaKnown RBP7.28□□□□□ -1.24
SYNE2-216ENST00000555002 RASA4BC9J798 803 aa7.28□□□□□ -1.24
SYNE2-216ENST00000555002 GOLGA8RI6L899 631 aa7.28□□□□□ -1.24
SYNE2-216ENST00000555002 RASA4O43374 803 aa7.28□□□□□ -1.24
SYNE2-216ENST00000555002 CTSHP09668 335 aa7.28□□□□□ -1.24
SYNE2-216ENST00000555002 RANBP1P43487 201 aa7.28□□□□□ -1.24
SYNE2-216ENST00000555002 CIAPIN1Q6FI81 312 aa7.28□□□□□ -1.24
SYNE2-216ENST00000555002 PNMA8BQ9ULN7 279 aaPredicted RBP7.28□□□□□ -1.24
SYNE2-216ENST00000555002 RXRBP28702 533 aa7.27□□□□□ -1.24
SYNE2-216ENST00000555002 ETFBP38117 255 aa7.27□□□□□ -1.24
SYNE2-216ENST00000555002 DPYDQ12882 1025 aa7.27□□□□□ -1.24
SYNE2-216ENST00000555002 SARM1Q6SZW1 724 aa7.27□□□□□ -1.24
SYNE2-216ENST00000555002 FAM47EQ6ZV65 393 aa7.27□□□□□ -1.24
SYNE2-216ENST00000555002 ATPAF2Q8N5M1 289 aa7.27□□□□□ -1.24
SYNE2-216ENST00000555002 HAUS4Q9H6D7 363 aa7.27□□□□□ -1.24
SYNE2-216ENST00000555002 SCUBE2Q9NQ36 999 aa7.27□□□□□ -1.24
SYNE2-216ENST00000555002 STAP1Q9ULZ2 295 aa7.27□□□□□ -1.24
SYNE2-216ENST00000555002 USP17L3A6NCW0 530 aa7.27□□□□□ -1.25
SYNE2-216ENST00000555002 USP17L4A6NCW7 530 aa7.27□□□□□ -1.25
SYNE2-216ENST00000555002 ASAP2O43150 1006 aa7.27□□□□□ -1.25
SYNE2-216ENST00000555002 CMA1P23946 247 aa7.27□□□□□ -1.25
SYNE2-216ENST00000555002 SDC4P31431 198 aa7.27□□□□□ -1.25
SYNE2-216ENST00000555002 USP17L2Q6R6M4 530 aa7.27□□□□□ -1.25
SYNE2-216ENST00000555002 USP17L1Q7RTZ2 530 aa7.27□□□□□ -1.25
SYNE2-216ENST00000555002 ZNF512Q96ME7 567 aaPredicted RBP7.27□□□□□ -1.25
SYNE2-216ENST00000555002 MRPS26Q9BYN8 205 aaKnown RBP7.27□□□□□ -1.25
SYNE2-216ENST00000555002 ATP10DQ9P241 1426 aa7.27□□□□□ -1.25
SYNE2-216ENST00000555002 PNMA6EA0A0J9YXQ4 647 aa7.27□□□□□ -1.25
SYNE2-216ENST00000555002 ATXN3P54252 364 aaPredicted RBP7.27□□□□□ -1.25
SYNE2-216ENST00000555002 PMS2P54278 862 aa7.27□□□□□ -1.25
SYNE2-216ENST00000555002 CDK17Q00537 523 aa7.27□□□□□ -1.25
SYNE2-216ENST00000555002 COG1Q8WTW3 980 aa7.27□□□□□ -1.25
SYNE2-216ENST00000555002 ZNF302Q9NR11 478 aa7.27□□□□□ -1.25
SYNE2-216ENST00000555002 KIF1BO60333 1816 aa7.27□□□□□ -1.25
SYNE2-216ENST00000555002 SLC16A4O15374 487 aa7.27□□□□□ -1.25
SYNE2-216ENST00000555002 TSC22D2O75157 780 aa7.27□□□□□ -1.25
SYNE2-216ENST00000555002 FLT3P36888 993 aa7.27□□□□□ -1.25
SYNE2-216ENST00000555002 GPATCH4Q5T3I0 446 aaKnown RBP7.27□□□□□ -1.25
SYNE2-216ENST00000555002 OOSP2Q86WS3 158 aa7.27□□□□□ -1.25
SYNE2-216ENST00000555002 LSG1Q9H089 658 aaKnown RBP7.27□□□□□ -1.25
SYNE2-216ENST00000555002 RPRD1BQ9NQG5 326 aaKnown RBP7.27□□□□□ -1.25
SYNE2-216ENST00000555002 KLF15Q9UIH9 416 aa7.27□□□□□ -1.25
SYNE2-216ENST00000555002 MYO1CO00159 1063 aa7.27□□□□□ -1.25
SYNE2-216ENST00000555002 TEX28O15482 410 aa7.27□□□□□ -1.25
SYNE2-216ENST00000555002 PYGMP11217 842 aa7.27□□□□□ -1.25
SYNE2-216ENST00000555002 PLOD1Q02809 727 aaPredicted RBP7.27□□□□□ -1.25
SYNE2-216ENST00000555002 PTH1RQ03431 593 aa7.27□□□□□ -1.25
SYNE2-216ENST00000555002 FAM102AQ5T9C2 384 aaPredicted RBP7.27□□□□□ -1.25
SYNE2-216ENST00000555002 DGKHQ86XP1 1220 aa7.27□□□□□ -1.25
SYNE2-216ENST00000555002 MIER2Q8N344 545 aa7.27□□□□□ -1.25
SYNE2-216ENST00000555002 SLC25A41Q8N5S1 370 aa7.27□□□□□ -1.25
SYNE2-216ENST00000555002 NHEJ1Q9H9Q4 299 aaPredicted RBP7.27□□□□□ -1.25
SYNE2-216ENST00000555002 SLC24A3Q9HC58 644 aa7.27□□□□□ -1.25
SYNE2-216ENST00000555002 PCDHGA4Q9Y5G9 962 aa7.27□□□□□ -1.25
SYNE2-216ENST00000555002 MAP3K19Q56UN5 1328 aa7.27□□□□□ -1.25
SYNE2-216ENST00000555002 PEX1O43933 1283 aa7.27□□□□□ -1.25
SYNE2-216ENST00000555002 CACNB3P54284 484 aa7.27□□□□□ -1.25
SYNE2-216ENST00000555002 TWF1Q12792 350 aa7.27□□□□□ -1.25
SYNE2-216ENST00000555002 LRRC24Q50LG9 513 aa7.27□□□□□ -1.25
SYNE2-216ENST00000555002 AKIRIN2Q53H80 203 aa7.27□□□□□ -1.25
SYNE2-216ENST00000555002 AHI1Q8N157 1196 aa7.27□□□□□ -1.25
SYNE2-216ENST00000555002 CLMNQ96JQ2 1002 aa7.27□□□□□ -1.25
SYNE2-216ENST00000555002 RMDN3Q96TC7 470 aa7.27□□□□□ -1.25
SYNE2-216ENST00000555002 FAM213AQ9BRX8 229 aa7.27□□□□□ -1.25
SYNE2-216ENST00000555002 ZNF304Q9HCX3 659 aa7.27□□□□□ -1.25
SYNE2-216ENST00000555002 ZBTB40Q9NUA8 1239 aa7.27□□□□□ -1.25
SYNE2-216ENST00000555002 TPI1P60174 286 aa7.27□□□□□ -1.25
SYNE2-216ENST00000555002 PSMC6P62333 389 aa7.27□□□□□ -1.25
SYNE2-216ENST00000555002 AP2B1P63010 937 aa7.27□□□□□ -1.25
SYNE2-216ENST00000555002 ARHGEF7Q14155 803 aa7.27□□□□□ -1.25
SYNE2-216ENST00000555002 DDI2Q5TDH0 399 aa7.27□□□□□ -1.25
SYNE2-216ENST00000555002 ZNF614Q8N883 585 aa7.27□□□□□ -1.25
SYNE2-216ENST00000555002 PGBD4Q96DM1 585 aa7.27□□□□□ -1.25
SYNE2-216ENST00000555002 FAM167BQ9BTA0 163 aa7.27□□□□□ -1.25
SYNE2-216ENST00000555002 TRIM62Q9BVG3 475 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms