RNA–Protein interactions for RNA: ENST00000554995.1

PSEN1-211, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 592 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-211ENST00000554995 RHOT1Q8IXI2 618 aa6.72□□□□□ -1.33
PSEN1-211ENST00000554995 STPG3Q8N7X2 389 aa6.72□□□□□ -1.33
PSEN1-211ENST00000554995 HOXB13Q92826 284 aaPredicted RBP6.72□□□□□ -1.33
PSEN1-211ENST00000554995 NT5C1BQ96P26 610 aa6.72□□□□□ -1.33
PSEN1-211ENST00000554995 C22orf23Q9BZE7 217 aa6.72□□□□□ -1.33
PSEN1-211ENST00000554995 ARMT1Q9H993 441 aa6.72□□□□□ -1.33
PSEN1-211ENST00000554995 KCND1Q9NSA2 647 aa6.72□□□□□ -1.33
PSEN1-211ENST00000554995 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.72□□□□□ -1.33
PSEN1-211ENST00000554995 DNAI1Q9UI46 699 aa6.72□□□□□ -1.33
PSEN1-211ENST00000554995 A0A1W2PR48 441 aa6.71□□□□□ -1.34
PSEN1-211ENST00000554995 LRRC14BA6NHZ5 514 aa6.71□□□□□ -1.34
PSEN1-211ENST00000554995 F5H423 210 aaPredicted RBP6.71□□□□□ -1.34
PSEN1-211ENST00000554995 N4BP3O15049 544 aa6.71□□□□□ -1.34
PSEN1-211ENST00000554995 SGTAO43765 313 aa6.71□□□□□ -1.34
PSEN1-211ENST00000554995 AKR1B10O60218 316 aa6.71□□□□□ -1.34
PSEN1-211ENST00000554995 LY86O95711 162 aa6.71□□□□□ -1.34
PSEN1-211ENST00000554995 CYP2C8P10632 490 aa6.71□□□□□ -1.34
PSEN1-211ENST00000554995 NCAM1P13591 858 aa6.71□□□□□ -1.34
PSEN1-211ENST00000554995 CTSSP25774 331 aa6.71□□□□□ -1.34
PSEN1-211ENST00000554995 VIPR1P32241 457 aa6.71□□□□□ -1.34
PSEN1-211ENST00000554995 ADCY8P40145 1251 aa6.71□□□□□ -1.34
PSEN1-211ENST00000554995 MC3RP41968 323 aa6.71□□□□□ -1.34
PSEN1-211ENST00000554995 PIK3CBP42338 1070 aa6.71□□□□□ -1.34
PSEN1-211ENST00000554995 PRIM2P49643 509 aa6.71□□□□□ -1.34
PSEN1-211ENST00000554995 HK3P52790 923 aa6.71□□□□□ -1.34
PSEN1-211ENST00000554995 JAG1P78504 1218 aa6.71□□□□□ -1.34
PSEN1-211ENST00000554995 CD69Q07108 199 aa6.71□□□□□ -1.34
PSEN1-211ENST00000554995 NOGQ13253 232 aa6.71□□□□□ -1.34
PSEN1-211ENST00000554995 OLFML2BQ68BL8 750 aa6.71□□□□□ -1.34
PSEN1-211ENST00000554995 IRF2BP1Q8IU81 584 aa6.71□□□□□ -1.34
PSEN1-211ENST00000554995 BCL6BQ8N143 479 aaPredicted RBP6.71□□□□□ -1.34
PSEN1-211ENST00000554995 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.71□□□□□ -1.34
PSEN1-211ENST00000554995 PPM1EQ8WY54 764 aa6.71□□□□□ -1.34
PSEN1-211ENST00000554995 RAB24Q969Q5 203 aa6.71□□□□□ -1.34
PSEN1-211ENST00000554995 ZSWIM3Q96MP5 696 aa6.71□□□□□ -1.34
PSEN1-211ENST00000554995 ZMAT3Q9HA38 289 aaKnown RBP6.71□□□□□ -1.34
PSEN1-211ENST00000554995 ATP6V0A4Q9HBG4 840 aa6.71□□□□□ -1.34
PSEN1-211ENST00000554995 PPFIA4O75335 1185 aa6.7□□□□□ -1.34
PSEN1-211ENST00000554995 MYF5P13349 255 aa6.7□□□□□ -1.34
PSEN1-211ENST00000554995 ADSLP30566 484 aaPredicted RBP6.7□□□□□ -1.34
PSEN1-211ENST00000554995 ITGA1P56199 1179 aa6.7□□□□□ -1.34
PSEN1-211ENST00000554995 MEF2AQ02078 507 aaPredicted RBP6.7□□□□□ -1.34
PSEN1-211ENST00000554995 ADAM9Q13443 819 aa6.7□□□□□ -1.34
PSEN1-211ENST00000554995 WDR72Q3MJ13 1102 aa6.7□□□□□ -1.34
PSEN1-211ENST00000554995 ABHD15Q6UXT9 468 aa6.7□□□□□ -1.34
PSEN1-211ENST00000554995 MYRIPQ8NFW9 859 aa6.7□□□□□ -1.34
PSEN1-211ENST00000554995 DEPTORQ8TB45 409 aa6.7□□□□□ -1.34
PSEN1-211ENST00000554995 POF1BQ8WVV4 589 aa6.7□□□□□ -1.34
PSEN1-211ENST00000554995 RIPOR3Q96MK2 946 aa6.7□□□□□ -1.34
PSEN1-211ENST00000554995 DMRTA2Q96SC8 542 aa6.7□□□□□ -1.34
PSEN1-211ENST00000554995 PTPN18Q99952 460 aa6.7□□□□□ -1.34
PSEN1-211ENST00000554995 DCP1AQ9NPI6 582 aaPredicted RBP6.7□□□□□ -1.34
PSEN1-211ENST00000554995 TDP1Q9NUW8 608 aa6.7□□□□□ -1.34
PSEN1-211ENST00000554995 SAE1Q9UBE0 346 aaPredicted RBP6.7□□□□□ -1.34
PSEN1-211ENST00000554995 STAP2Q9UGK3 403 aa6.7□□□□□ -1.34
PSEN1-211ENST00000554995 RPTORQ8N122 1335 aa6.7□□□□□ -1.34
PSEN1-211ENST00000554995 RHPN2P1A8MT19 583 aa6.69□□□□□ -1.34
PSEN1-211ENST00000554995 HRKO00198 91 aa6.69□□□□□ -1.34
PSEN1-211ENST00000554995 FRS3O43559 492 aa6.69□□□□□ -1.34
PSEN1-211ENST00000554995 ENDOD1O94919 500 aa6.69□□□□□ -1.34
PSEN1-211ENST00000554995 LTA4HP09960 611 aaKnown RBP6.69□□□□□ -1.34
PSEN1-211ENST00000554995 SLC6A9P48067 706 aa6.69□□□□□ -1.34
PSEN1-211ENST00000554995 NKX6-1P78426 367 aaPredicted RBP6.69□□□□□ -1.34
PSEN1-211ENST00000554995 CDC42EP1Q00587 391 aa6.69□□□□□ -1.34
PSEN1-211ENST00000554995 RAPGEF1Q13905 1077 aa6.69□□□□□ -1.34
PSEN1-211ENST00000554995 FGL2Q14314 439 aa6.69□□□□□ -1.34
PSEN1-211ENST00000554995 RTP5Q14D33 572 aa6.69□□□□□ -1.34
PSEN1-211ENST00000554995 TMEM95Q3KNT9 176 aa6.69□□□□□ -1.34
PSEN1-211ENST00000554995 TMEM200BQ69YZ2 307 aa6.69□□□□□ -1.34
PSEN1-211ENST00000554995 TMED8Q6PL24 325 aaPredicted RBP6.69□□□□□ -1.34
PSEN1-211ENST00000554995 OTOP2Q7RTS6 562 aa6.69□□□□□ -1.34
PSEN1-211ENST00000554995 STK32CQ86UX6 486 aa6.69□□□□□ -1.34
PSEN1-211ENST00000554995 OR2C3Q8N628 320 aa6.69□□□□□ -1.34
PSEN1-211ENST00000554995 ANKRD42Q8N9B4 389 aa6.69□□□□□ -1.34
PSEN1-211ENST00000554995 C3orf20Q8ND61 904 aa6.69□□□□□ -1.34
PSEN1-211ENST00000554995 SMARCC2Q8TAQ2 1214 aa6.69□□□□□ -1.34
PSEN1-211ENST00000554995 PHKBQ93100 1093 aa6.69□□□□□ -1.34
PSEN1-211ENST00000554995 APIPQ96GX9 242 aa6.69□□□□□ -1.34
PSEN1-211ENST00000554995 CLPTM1LQ96KA5 538 aa6.69□□□□□ -1.34
PSEN1-211ENST00000554995 WDR92Q96MX6 357 aa6.69□□□□□ -1.34
PSEN1-211ENST00000554995 SAMD11Q96NU1 681 aa6.69□□□□□ -1.34
PSEN1-211ENST00000554995 SELENOOQ9BVL4 669 aa6.69□□□□□ -1.34
PSEN1-211ENST00000554995 OSBPL6Q9BZF3 934 aa6.69□□□□□ -1.34
PSEN1-211ENST00000554995 BTBD1Q9H0C5 482 aa6.69□□□□□ -1.34
PSEN1-211ENST00000554995 TRMT13Q9NUP7 481 aaKnown RBP6.69□□□□□ -1.34
PSEN1-211ENST00000554995 TPCN1Q9ULQ1 816 aa6.69□□□□□ -1.34
PSEN1-211ENST00000554995 CORO2BQ9UQ03 480 aa6.69□□□□□ -1.34
PSEN1-211ENST00000554995 SIK3Q9Y2K2 1263 aa6.69□□□□□ -1.34
PSEN1-211ENST00000554995 RNF114Q9Y508 228 aa6.69□□□□□ -1.34
PSEN1-211ENST00000554995 A0A0G2JNJ9 132 aa6.68□□□□□ -1.34
PSEN1-211ENST00000554995 H3BUI4 141 aa6.68□□□□□ -1.34
PSEN1-211ENST00000554995 KPNA5O15131 536 aa6.68□□□□□ -1.34
PSEN1-211ENST00000554995 PRAMEF4O60810 478 aa6.68□□□□□ -1.34
PSEN1-211ENST00000554995 NBNO60934 754 aa6.68□□□□□ -1.34
PSEN1-211ENST00000554995 FSBPO95073 299 aa6.68□□□□□ -1.34
PSEN1-211ENST00000554995 FGAP02671 866 aa6.68□□□□□ -1.34
PSEN1-211ENST00000554995 GAAP10253 952 aa6.68□□□□□ -1.34
PSEN1-211ENST00000554995 HNRNPLP14866 589 aaKnown RBP eCLIP6.68□□□□□ -1.34
PSEN1-211ENST00000554995 ATF2P15336 505 aa6.68□□□□□ -1.34
PSEN1-211ENST00000554995 HALP42357 657 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms