RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 EXOC3L1Q86VI1 746 aa16.78■□□□□ 0.28
SYNE3-203ENST00000554873 SMC1BQ8NDV3 1235 aa16.78■□□□□ 0.28
SYNE3-203ENST00000554873 EPS8L3Q8TE67 593 aaKnown RBP16.78■□□□□ 0.28
SYNE3-203ENST00000554873 SCG3Q8WXD2 468 aaKnown RBP16.78■□□□□ 0.28
SYNE3-203ENST00000554873 GRAMD1AQ96CP6 724 aa16.78■□□□□ 0.28
SYNE3-203ENST00000554873 HIC2Q96JB3 615 aa16.78■□□□□ 0.28
SYNE3-203ENST00000554873 MIS12Q9H081 205 aa16.78■□□□□ 0.28
SYNE3-203ENST00000554873 MYLK2Q9H1R3 596 aa16.78■□□□□ 0.28
SYNE3-203ENST00000554873 RHBDL2Q9NX52 303 aa16.78■□□□□ 0.28
SYNE3-203ENST00000554873 RASGRF2O14827 1237 aa16.77■□□□□ 0.28
SYNE3-203ENST00000554873 EYA4O95677 639 aa16.77■□□□□ 0.28
SYNE3-203ENST00000554873 GNA14O95837 355 aa16.77■□□□□ 0.28
SYNE3-203ENST00000554873 KLRC3Q07444 240 aa16.77■□□□□ 0.28
SYNE3-203ENST00000554873 DUPD1Q68J44 220 aa16.77■□□□□ 0.28
SYNE3-203ENST00000554873 MFSD5Q6N075 450 aa16.77■□□□□ 0.28
SYNE3-203ENST00000554873 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.77■□□□□ 0.28
SYNE3-203ENST00000554873 ADAMTS1Q9UHI8 967 aa16.77■□□□□ 0.28
SYNE3-203ENST00000554873 INTUQ9ULD6 942 aa16.77■□□□□ 0.28
SYNE3-203ENST00000554873 COL5A3P25940 1745 aaPredicted RBP16.77■□□□□ 0.28
SYNE3-203ENST00000554873 NAV1Q8NEY1 1877 aa16.77■□□□□ 0.28
SYNE3-203ENST00000554873 RASA3Q14644 834 aa16.77■□□□□ 0.27
SYNE3-203ENST00000554873 NFIXQ14938 502 aa16.77■□□□□ 0.27
SYNE3-203ENST00000554873 FAM26FQ5R3K3 315 aa16.77■□□□□ 0.27
SYNE3-203ENST00000554873 LRRC57Q8N9N7 239 aa16.77■□□□□ 0.27
SYNE3-203ENST00000554873 HAS1Q92839 578 aa16.77■□□□□ 0.27
SYNE3-203ENST00000554873 HOXA7P31268 230 aaPredicted RBP16.76■□□□□ 0.27
SYNE3-203ENST00000554873 SLCO1A2P46721 670 aa16.76■□□□□ 0.27
SYNE3-203ENST00000554873 NOVP48745 357 aa16.76■□□□□ 0.27
SYNE3-203ENST00000554873 TNNI2P48788 182 aa16.76■□□□□ 0.27
SYNE3-203ENST00000554873 RASSF2P50749 326 aa16.76■□□□□ 0.27
SYNE3-203ENST00000554873 SESN3P58005 492 aa16.76■□□□□ 0.27
SYNE3-203ENST00000554873 CGB2Q6NT52 195 aa16.76■□□□□ 0.27
SYNE3-203ENST00000554873 DAAM2Q86T65 1068 aa16.76■□□□□ 0.27
SYNE3-203ENST00000554873 NELFCDQ8IXH7 590 aa16.76■□□□□ 0.27
SYNE3-203ENST00000554873 NR1H4Q96RI1 486 aaPredicted RBP16.76■□□□□ 0.27
SYNE3-203ENST00000554873 ERP44Q9BS26 406 aa16.76■□□□□ 0.27
SYNE3-203ENST00000554873 HAO1Q9UJM8 370 aa16.76■□□□□ 0.27
SYNE3-203ENST00000554873 TMEM120BA0PK00 339 aa16.76■□□□□ 0.27
SYNE3-203ENST00000554873 TARSP26639 723 aaKnown RBP16.76■□□□□ 0.27
SYNE3-203ENST00000554873 RAPGEF1Q13905 1077 aa16.76■□□□□ 0.27
SYNE3-203ENST00000554873 DNAJC14Q6Y2X3 702 aaPredicted RBP16.76■□□□□ 0.27
SYNE3-203ENST00000554873 TRIM59Q8IWR1 403 aa16.76■□□□□ 0.27
SYNE3-203ENST00000554873 CENPKQ9BS16 269 aa16.76■□□□□ 0.27
SYNE3-203ENST00000554873 DBR1Q9UK59 544 aaKnown RBP16.76■□□□□ 0.27
SYNE3-203ENST00000554873 STRCQ7RTU9 1775 aa16.76■□□□□ 0.27
SYNE3-203ENST00000554873 TMEM221A6NGB7 291 aa16.75■□□□□ 0.27
SYNE3-203ENST00000554873 RGL2O15211 777 aa16.75■□□□□ 0.27
SYNE3-203ENST00000554873 MAFGO15525 162 aa16.75■□□□□ 0.27
SYNE3-203ENST00000554873 CYP1A1P04798 512 aaPredicted RBP16.75■□□□□ 0.27
SYNE3-203ENST00000554873 EIF4BP23588 611 aaKnown RBP16.75■□□□□ 0.27
SYNE3-203ENST00000554873 EPHB2P29323 1055 aa16.75■□□□□ 0.27
SYNE3-203ENST00000554873 MTFR1Q15390 333 aa16.75■□□□□ 0.27
SYNE3-203ENST00000554873 UBE2SQ16763 222 aa16.75■□□□□ 0.27
SYNE3-203ENST00000554873 ZC2HC1CQ53FD0 456 aaPredicted RBP16.75■□□□□ 0.27
SYNE3-203ENST00000554873 FAM133AQ8N9E0 248 aa16.75■□□□□ 0.27
SYNE3-203ENST00000554873 PPP1R14BQ96C90 147 aa16.75■□□□□ 0.27
SYNE3-203ENST00000554873 ERP27Q96DN0 273 aa16.75■□□□□ 0.27
SYNE3-203ENST00000554873 DDX27Q96GQ7 796 aaKnown RBP16.75■□□□□ 0.27
SYNE3-203ENST00000554873 CEP63Q96MT8 703 aa16.75■□□□□ 0.27
SYNE3-203ENST00000554873 GOLPH3Q9H4A6 298 aa16.75■□□□□ 0.27
SYNE3-203ENST00000554873 RPTORQ8N122 1335 aa16.75■□□□□ 0.27
SYNE3-203ENST00000554873 hCG_1984214I3L0E3 225 aa16.75■□□□□ 0.27
SYNE3-203ENST00000554873 KLHL30Q0D2K2 578 aa16.75■□□□□ 0.27
SYNE3-203ENST00000554873 ZNF713Q8N859 430 aaPredicted RBP16.75■□□□□ 0.27
SYNE3-203ENST00000554873 TGS1Q96RS0 853 aaKnown RBP16.75■□□□□ 0.27
SYNE3-203ENST00000554873 WDR37Q9Y2I8 494 aa16.75■□□□□ 0.27
SYNE3-203ENST00000554873 PCDHA2Q9Y5H9 948 aa16.75■□□□□ 0.27
SYNE3-203ENST00000554873 DDX60LQ5H9U9 1706 aaKnown RBP16.75■□□□□ 0.27
SYNE3-203ENST00000554873 HNRNPRO43390 633 aaKnown RBP16.74■□□□□ 0.27
SYNE3-203ENST00000554873 ZNF189O75820 626 aaPredicted RBP16.74■□□□□ 0.27
SYNE3-203ENST00000554873 POLGP54098 1239 aaPredicted RBP16.74■□□□□ 0.27
SYNE3-203ENST00000554873 PLTPP55058 493 aa16.74■□□□□ 0.27
SYNE3-203ENST00000554873 PPP2R5EQ16537 467 aa16.74■□□□□ 0.27
SYNE3-203ENST00000554873 LIN52Q52LA3 116 aa16.74■□□□□ 0.27
SYNE3-203ENST00000554873 C10orf76Q5T2E6 689 aa16.74■□□□□ 0.27
SYNE3-203ENST00000554873 PPFIBP2Q8ND30 876 aa16.74■□□□□ 0.27
SYNE3-203ENST00000554873 SLC7A6OSQ96CW6 309 aaPredicted RBP16.74■□□□□ 0.27
SYNE3-203ENST00000554873 UIMC1Q96RL1 719 aa16.74■□□□□ 0.27
SYNE3-203ENST00000554873 GPCPD1Q9NPB8 672 aa16.74■□□□□ 0.27
SYNE3-203ENST00000554873 DAAM1Q9Y4D1 1078 aa16.74■□□□□ 0.27
SYNE3-203ENST00000554873 CNTNAP4Q9C0A0 1308 aa16.74■□□□□ 0.27
SYNE3-203ENST00000554873 NPHP3-ACAD11A0A0J9YXS1 232 aa16.74■□□□□ 0.27
SYNE3-203ENST00000554873 E9PMD0 336 aa16.74■□□□□ 0.27
SYNE3-203ENST00000554873 DR1Q01658 176 aa16.74■□□□□ 0.27
SYNE3-203ENST00000554873 ZNF804AQ7Z570 1209 aa16.74■□□□□ 0.27
SYNE3-203ENST00000554873 KIAA1683Q9H0B3 1180 aa16.74■□□□□ 0.27
SYNE3-203ENST00000554873 SEMA4AQ9H3S1 761 aa16.74■□□□□ 0.27
SYNE3-203ENST00000554873 DDX25Q9UHL0 483 aaKnown RBP16.74■□□□□ 0.27
SYNE3-203ENST00000554873 FAM187AA6NFU0 413 aa16.74■□□□□ 0.27
SYNE3-203ENST00000554873 TRAFD1O14545 582 aaPredicted RBP16.74■□□□□ 0.27
SYNE3-203ENST00000554873 ASLP04424 464 aa16.74■□□□□ 0.27
SYNE3-203ENST00000554873 MARK3P27448 753 aa16.74■□□□□ 0.27
SYNE3-203ENST00000554873 YARSP54577 528 aaKnown RBP16.74■□□□□ 0.27
SYNE3-203ENST00000554873 DRG2P55039 364 aaKnown RBP16.74■□□□□ 0.27
SYNE3-203ENST00000554873 MARSP56192 900 aaKnown RBP16.74■□□□□ 0.27
SYNE3-203ENST00000554873 RHBDL3P58872 404 aa16.74■□□□□ 0.27
SYNE3-203ENST00000554873 PTENP60484 403 aa16.74■□□□□ 0.27
SYNE3-203ENST00000554873 CACNB1Q02641 598 aaPredicted RBP16.74■□□□□ 0.27
SYNE3-203ENST00000554873 GIT2Q14161 759 aa16.74■□□□□ 0.27
SYNE3-203ENST00000554873 KHDC1Q4VXA5 237 aaKnown RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms