RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 STRBPQ96SI9 672 aaKnown RBP5.69□□□□□ -1.5
ATXN3-229ENST00000554672 C17orf80Q9BSJ5 609 aa5.69□□□□□ -1.5
ATXN3-229ENST00000554672 PUS7LQ9H0K6 701 aaKnown RBP5.69□□□□□ -1.5
ATXN3-229ENST00000554672 BOLA2Q9H3K6 86 aa5.69□□□□□ -1.5
ATXN3-229ENST00000554672 NSUN3Q9H649 340 aaKnown RBP5.69□□□□□ -1.5
ATXN3-229ENST00000554672 ISY1Q9ULR0 285 aaKnown RBP5.69□□□□□ -1.5
ATXN3-229ENST00000554672 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.69□□□□□ -1.5
ATXN3-229ENST00000554672 CHD9Q3L8U1 2897 aa5.69□□□□□ -1.5
ATXN3-229ENST00000554672 TMEM221A6NGB7 291 aa5.68□□□□□ -1.5
ATXN3-229ENST00000554672 GSG1L2A8MUP6 293 aa5.68□□□□□ -1.5
ATXN3-229ENST00000554672 B4DLN1 442 aa5.68□□□□□ -1.5
ATXN3-229ENST00000554672 M0R296 226 aa5.68□□□□□ -1.5
ATXN3-229ENST00000554672 PRDM1O75626 825 aa5.68□□□□□ -1.5
ATXN3-229ENST00000554672 AMHP03971 560 aa5.68□□□□□ -1.5
ATXN3-229ENST00000554672 ICAM1P05362 532 aa5.68□□□□□ -1.5
ATXN3-229ENST00000554672 CEACAM5P06731 702 aa5.68□□□□□ -1.5
ATXN3-229ENST00000554672 TSPY3P0CV98 308 aa5.68□□□□□ -1.5
ATXN3-229ENST00000554672 TSPY8P0CW00 308 aa5.68□□□□□ -1.5
ATXN3-229ENST00000554672 TXNP10599 105 aaKnown RBP5.68□□□□□ -1.5
ATXN3-229ENST00000554672 CKBP12277 381 aa5.68□□□□□ -1.5
ATXN3-229ENST00000554672 CASTP20810 708 aaKnown RBP5.68□□□□□ -1.5
ATXN3-229ENST00000554672 GSTT1P30711 240 aa5.68□□□□□ -1.5
ATXN3-229ENST00000554672 LTBRP36941 435 aa5.68□□□□□ -1.5
ATXN3-229ENST00000554672 MRPL12P52815 198 aaKnown RBP5.68□□□□□ -1.5
ATXN3-229ENST00000554672 CHMP4BP1P59074 171 aa5.68□□□□□ -1.5
ATXN3-229ENST00000554672 HTRA4P83105 476 aaPredicted RBP5.68□□□□□ -1.5
ATXN3-229ENST00000554672 TFAP4Q01664 338 aa5.68□□□□□ -1.5
ATXN3-229ENST00000554672 TCF15Q12870 199 aa5.68□□□□□ -1.5
ATXN3-229ENST00000554672 PPP2R5BQ15173 497 aa5.68□□□□□ -1.5
ATXN3-229ENST00000554672 SMAD2Q15796 467 aaKnown RBP5.68□□□□□ -1.5
ATXN3-229ENST00000554672 IFI16Q16666 785 aaKnown RBP5.68□□□□□ -1.5
ATXN3-229ENST00000554672 TCEAL5Q5H9L2 206 aa5.68□□□□□ -1.5
ATXN3-229ENST00000554672 SUGP1Q8IWZ8 645 aaKnown RBP5.68□□□□□ -1.5
ATXN3-229ENST00000554672 TMEM192Q8IY95 271 aa5.68□□□□□ -1.5
ATXN3-229ENST00000554672 FBF1Q8TES7 1133 aa5.68□□□□□ -1.5
ATXN3-229ENST00000554672 PPP1R13LQ8WUF5 828 aa5.68□□□□□ -1.5
ATXN3-229ENST00000554672 CTAGE1Q96RT6 745 aa5.68□□□□□ -1.5
ATXN3-229ENST00000554672 HAUS7Q99871 368 aa5.68□□□□□ -1.5
ATXN3-229ENST00000554672 TNKS2Q9H2K2 1166 aa5.68□□□□□ -1.5
ATXN3-229ENST00000554672 SSU72Q9NP77 194 aaKnown RBP5.68□□□□□ -1.5
ATXN3-229ENST00000554672 CLDND1Q9NY35 253 aa5.68□□□□□ -1.5
ATXN3-229ENST00000554672 MUTYHQ9UIF7 546 aa5.68□□□□□ -1.5
ATXN3-229ENST00000554672 PNMA2Q9UL42 364 aa5.68□□□□□ -1.5
ATXN3-229ENST00000554672 CCPG1Q9ULG6 757 aa5.68□□□□□ -1.5
ATXN3-229ENST00000554672 PTPDC1A2A3K4 754 aa5.67□□□□□ -1.5
ATXN3-229ENST00000554672 RBAK-RBAKDNI3L0D1 243 aa5.67□□□□□ -1.5
ATXN3-229ENST00000554672 STXBP3O00186 592 aa5.67□□□□□ -1.5
ATXN3-229ENST00000554672 MBTPS2O43462 519 aa5.67□□□□□ -1.5
ATXN3-229ENST00000554672 RAB11FIP3O75154 756 aa5.67□□□□□ -1.5
ATXN3-229ENST00000554672 CHGBP05060 677 aa5.67□□□□□ -1.5
ATXN3-229ENST00000554672 APPP05067 770 aa5.67□□□□□ -1.5
ATXN3-229ENST00000554672 RB1P06400 928 aa5.67□□□□□ -1.5
ATXN3-229ENST00000554672 SLC3A2P08195 630 aaKnown RBP5.67□□□□□ -1.5
ATXN3-229ENST00000554672 GNAT2P19087 354 aa5.67□□□□□ -1.5
ATXN3-229ENST00000554672 CALML3P27482 149 aa5.67□□□□□ -1.5
ATXN3-229ENST00000554672 SNAP25P60880 206 aa5.67□□□□□ -1.5
ATXN3-229ENST00000554672 HNRNPUQ00839 825 aaKnown RBP eCLIP5.67□□□□□ -1.5
ATXN3-229ENST00000554672 PDE4BQ07343 736 aa5.67□□□□□ -1.5
ATXN3-229ENST00000554672 TCTN1Q2MV58 587 aa5.67□□□□□ -1.5
ATXN3-229ENST00000554672 ZBTB37Q5TC79 503 aa5.67□□□□□ -1.5
ATXN3-229ENST00000554672 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.67□□□□□ -1.5
ATXN3-229ENST00000554672 RNF207Q6ZRF8 634 aa5.67□□□□□ -1.5
ATXN3-229ENST00000554672 KCTD1Q719H9 257 aa5.67□□□□□ -1.5
ATXN3-229ENST00000554672 ITPRIPQ8IWB1 547 aa5.67□□□□□ -1.5
ATXN3-229ENST00000554672 FTSJ3Q8IY81 847 aaKnown RBP5.67□□□□□ -1.5
ATXN3-229ENST00000554672 C7orf31Q8N865 590 aa5.67□□□□□ -1.5
ATXN3-229ENST00000554672 DBF4BQ8NFT6 615 aa5.67□□□□□ -1.5
ATXN3-229ENST00000554672 DNERQ8NFT8 737 aa5.67□□□□□ -1.5
ATXN3-229ENST00000554672 DHX38Q92620 1227 aaKnown RBP5.67□□□□□ -1.5
ATXN3-229ENST00000554672 KAT2BQ92831 832 aa5.67□□□□□ -1.5
ATXN3-229ENST00000554672 ATOH1Q92858 354 aaPredicted RBP5.67□□□□□ -1.5
ATXN3-229ENST00000554672 COPS5Q92905 334 aa5.67□□□□□ -1.5
ATXN3-229ENST00000554672 ASB16Q96NS5 453 aa5.67□□□□□ -1.5
ATXN3-229ENST00000554672 CEP44Q9C0F1 390 aa5.67□□□□□ -1.5
ATXN3-229ENST00000554672 LMAN2LQ9H0V9 348 aa5.67□□□□□ -1.5
ATXN3-229ENST00000554672 CHD7Q9P2D1 2997 aa5.67□□□□□ -1.5
ATXN3-229ENST00000554672 GTF2IRD1Q9UHL9 959 aa5.67□□□□□ -1.5
ATXN3-229ENST00000554672 PPM1HQ9ULR3 514 aa5.67□□□□□ -1.5
ATXN3-229ENST00000554672 EMSYQ7Z589 1322 aa5.67□□□□□ -1.5
ATXN3-229ENST00000554672 LRRC37A2A6NM11 1700 aa5.66□□□□□ -1.5
ATXN3-229ENST00000554672 PATL2C9JE40 543 aaKnown RBP5.66□□□□□ -1.5
ATXN3-229ENST00000554672 HMMRO75330 724 aa5.66□□□□□ -1.5
ATXN3-229ENST00000554672 GH1P01241 217 aa5.66□□□□□ -1.5
ATXN3-229ENST00000554672 C8AP07357 584 aa5.66□□□□□ -1.5
ATXN3-229ENST00000554672 CELA3AP09093 270 aa5.66□□□□□ -1.5
ATXN3-229ENST00000554672 EDNRBP24530 442 aa5.66□□□□□ -1.5
ATXN3-229ENST00000554672 TDO2P48775 406 aa5.66□□□□□ -1.5
ATXN3-229ENST00000554672 ZXDAP98168 799 aa5.66□□□□□ -1.5
ATXN3-229ENST00000554672 FZD5Q13467 585 aa5.66□□□□□ -1.5
ATXN3-229ENST00000554672 SMAD4Q13485 552 aaKnown RBP5.66□□□□□ -1.5
ATXN3-229ENST00000554672 INPP5AQ14642 412 aa5.66□□□□□ -1.5
ATXN3-229ENST00000554672 DGKDQ16760 1214 aa5.66□□□□□ -1.5
ATXN3-229ENST00000554672 TRIM71Q2Q1W2 868 aaKnown RBP5.66□□□□□ -1.5
ATXN3-229ENST00000554672 ZNF618Q5T7W0 954 aa5.66□□□□□ -1.5
ATXN3-229ENST00000554672 CCDC62Q6P9F0 684 aa5.66□□□□□ -1.5
ATXN3-229ENST00000554672 BTNL9Q6UXG8 535 aa5.66□□□□□ -1.5
ATXN3-229ENST00000554672 ERMP1Q7Z2K6 904 aa5.66□□□□□ -1.5
ATXN3-229ENST00000554672 RPAINQ86UA6 219 aa5.66□□□□□ -1.5
ATXN3-229ENST00000554672 MYOCDQ8IZQ8 938 aa5.66□□□□□ -1.5
ATXN3-229ENST00000554672 RGS22Q8NE09 1264 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms