RNA–Protein interactions for RNA: ENST00000554439.5

PRPF39-207, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,982 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-207ENST00000554439 TMOD1P28289 359 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 SLC1A4P43007 532 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 KIF11P52732 1056 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 EVA1CP58658 441 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 SNRPNP63162 240 aaKnown RBP2.81□□□□□ -1.96
PRPF39-207ENST00000554439 SPA17Q15506 151 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 TCEA2Q15560 299 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 PTGISQ16647 500 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 TM4SF20Q53R12 229 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 KLHDC7AQ5VTJ3 777 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 CCDC70Q6NSX1 233 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 C8orf74Q6P047 294 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 LLGL2Q6P1M3 1020 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 KIF6Q6ZMV9 814 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 GBP6Q6ZN66 633 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 TMTC3Q6ZXV5 915 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 RRAGAQ7L523 313 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 CATIPQ7Z7H3 387 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 FAM178BQ8IXR5 827 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 CCDC13Q8IYE1 715 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 CCDC170Q8IYT3 715 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 IQCKQ8N0W5 287 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 TMTC2Q8N394 836 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 TRIM58Q8NG06 486 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 MYCBPAPQ8TBZ2 947 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 CASKIN2Q8WXE0 1202 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 LPIN2Q92539 896 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 ZNF669Q96BR6 464 aaPredicted RBP2.81□□□□□ -1.96
PRPF39-207ENST00000554439 ZNF512BQ96KM6 892 aaPredicted RBP2.81□□□□□ -1.96
PRPF39-207ENST00000554439 CCT8L2Q96SF2 557 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 KRT12Q99456 494 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 PLA2G12BQ9BX93 195 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 NACAP1Q9BZK3 213 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 EPN3Q9H201 632 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 GOLPH3Q9H4A6 298 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 THAP9Q9H5L6 903 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 MMRN2Q9H8L6 949 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 TIAM2Q8IVF5 1701 aa2.81□□□□□ -1.96
PRPF39-207ENST00000554439 BCORQ6W2J9 1755 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 LTBP3Q9NS15 1303 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 DISP2A7MBM2 1401 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 TNS3Q68CZ2 1445 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 CCDC194A0A1B0GVG4 234 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 LRRC53A6NM62 1247 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 DCDC2CA8MYV0 355 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 DNM1LO00429 736 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 PSMA7O14818 248 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 TACC1O75410 805 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 DDAH1O94760 285 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 RHOBTB3O94955 611 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 FSBPO95073 299 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 S100BP04271 92 aaPredicted RBP2.8□□□□□ -1.96
PRPF39-207ENST00000554439 UQCRFS1P1P0C7P4 283 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 CYP2D6P10635 497 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 SCG2P13521 617 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 PLCG1P19174 1290 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 CHRNA4P43681 627 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 MMP14P50281 582 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 PCDH1Q08174 1060 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 ITGB3BPQ13352 177 aaPredicted RBP2.8□□□□□ -1.96
PRPF39-207ENST00000554439 E2F5Q15329 346 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 PPP2R5EQ16537 467 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 INF2Q27J81 1249 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 PRSS36Q5K4E3 855 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 CEP85LQ5SZL2 805 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 CFAP58Q5T655 872 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 ALS2CLQ60I27 953 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 IQCEQ6IPM2 695 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 EMBQ6PCB8 327 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 B4GALNT4Q76KP1 1039 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 ZNF572Q7Z3I7 529 aaPredicted RBP2.8□□□□□ -1.96
PRPF39-207ENST00000554439 MAATS1Q7Z4T9 603 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 NLRP14Q86W24 1093 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 FAM228AQ86W67 206 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 DDX42Q86XP3 938 aaKnown RBP eCLIP2.8□□□□□ -1.96
PRPF39-207ENST00000554439 CEP57Q86XR8 500 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 KLHL7Q8IXQ5 586 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 GIMAP8Q8ND71 665 aaPredicted RBP2.8□□□□□ -1.96
PRPF39-207ENST00000554439 ESR2Q92731 530 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 P2RX5Q93086 422 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 CAVIN3Q969G5 261 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 TM9SF2Q99805 663 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 NUCKS1Q9H1E3 243 aaKnown RBP2.8□□□□□ -1.96
PRPF39-207ENST00000554439 VCPKMTQ9H867 229 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 SLC40A1Q9NP59 571 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 SLC39A2Q9NP94 309 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 NLRC4Q9NPP4 1024 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 KLC4Q9NSK0 619 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 HAUS2Q9NVX0 235 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 RMND1Q9NWS8 449 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 BCCIPQ9P287 314 aaKnown RBP eCLIP2.8□□□□□ -1.96
PRPF39-207ENST00000554439 PLAAQ9Y263 795 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 HYOU1Q9Y4L1 999 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 CEP83Q9Y592 693 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 ALS2Q96Q42 1657 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 COL18A1P39060 1754 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 DOCK2Q92608 1830 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 MYH3P11055 1940 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 RAD51CO43502 376 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 AKR1B10O60218 316 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms