RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 ERVFC1P60507 584 aa11.53□□□□□ -0.56
PTCD2P1-201ENST00000554393 ATP2C1P98194 919 aaPredicted RBP11.53□□□□□ -0.56
PTCD2P1-201ENST00000554393 MCTP1Q6DN14 999 aa11.53□□□□□ -0.56
PTCD2P1-201ENST00000554393 PADI6Q6TGC4 694 aa11.53□□□□□ -0.56
PTCD2P1-201ENST00000554393 DTHD1Q6ZMT9 781 aa11.53□□□□□ -0.56
PTCD2P1-201ENST00000554393 AGMOQ6ZNB7 445 aa11.53□□□□□ -0.56
PTCD2P1-201ENST00000554393 ADGRD2Q7Z7M1 963 aa11.53□□□□□ -0.56
PTCD2P1-201ENST00000554393 FAM178BQ8IXR5 827 aa11.53□□□□□ -0.56
PTCD2P1-201ENST00000554393 URGCPQ8TCY9 931 aa11.53□□□□□ -0.56
PTCD2P1-201ENST00000554393 SNX29Q8TEQ0 813 aa11.53□□□□□ -0.56
PTCD2P1-201ENST00000554393 LPPQ93052 612 aa11.53□□□□□ -0.56
PTCD2P1-201ENST00000554393 CSRNP2Q9H175 543 aa11.53□□□□□ -0.56
PTCD2P1-201ENST00000554393 C2orf40Q9H1Z8 148 aa11.53□□□□□ -0.56
PTCD2P1-201ENST00000554393 EPHX3Q9H6B9 360 aa11.53□□□□□ -0.56
PTCD2P1-201ENST00000554393 RSAD1Q9HA92 442 aa11.53□□□□□ -0.56
PTCD2P1-201ENST00000554393 TBC1D13Q9NVG8 400 aa11.53□□□□□ -0.56
PTCD2P1-201ENST00000554393 KANSL3Q9P2N6 904 aa11.53□□□□□ -0.56
PTCD2P1-201ENST00000554393 PRKAG3Q9UGI9 489 aa11.53□□□□□ -0.56
PTCD2P1-201ENST00000554393 A0A087WWV3 80 aa11.52□□□□□ -0.57
PTCD2P1-201ENST00000554393 LRRIQ4A6NIV6 560 aa11.52□□□□□ -0.57
PTCD2P1-201ENST00000554393 MEIS3P2A8K0S8 358 aa11.52□□□□□ -0.57
PTCD2P1-201ENST00000554393 CSPG5O95196 566 aa11.52□□□□□ -0.57
PTCD2P1-201ENST00000554393 EYA4O95677 639 aa11.52□□□□□ -0.57
PTCD2P1-201ENST00000554393 IL9P15248 144 aa11.52□□□□□ -0.57
PTCD2P1-201ENST00000554393 ARF4P18085 180 aaPredicted RBP11.52□□□□□ -0.57
PTCD2P1-201ENST00000554393 GTF2F1P35269 517 aaKnown RBP eCLIP11.52□□□□□ -0.57
PTCD2P1-201ENST00000554393 PBX3P40426 434 aa11.52□□□□□ -0.57
PTCD2P1-201ENST00000554393 NAMPTP43490 491 aa11.52□□□□□ -0.57
PTCD2P1-201ENST00000554393 NRIP1P48552 1158 aa11.52□□□□□ -0.57
PTCD2P1-201ENST00000554393 NDUFV1P49821 464 aa11.52□□□□□ -0.57
PTCD2P1-201ENST00000554393 RNASELQ05823 741 aaKnown RBP11.52□□□□□ -0.57
PTCD2P1-201ENST00000554393 COASYQ13057 564 aa11.52□□□□□ -0.57
PTCD2P1-201ENST00000554393 SMAD4Q13485 552 aaKnown RBP11.52□□□□□ -0.57
PTCD2P1-201ENST00000554393 CUL4AQ13619 759 aa11.52□□□□□ -0.57
PTCD2P1-201ENST00000554393 BMS1Q14692 1282 aaKnown RBP11.52□□□□□ -0.57
PTCD2P1-201ENST00000554393 PPP2R5AQ15172 486 aa11.52□□□□□ -0.57
PTCD2P1-201ENST00000554393 SMAD2Q15796 467 aaKnown RBP11.52□□□□□ -0.57
PTCD2P1-201ENST00000554393 ECM1Q16610 540 aa11.52□□□□□ -0.57
PTCD2P1-201ENST00000554393 DUSP6Q16828 381 aa11.52□□□□□ -0.57
PTCD2P1-201ENST00000554393 FAM187BQ17R55 369 aa11.52□□□□□ -0.57
PTCD2P1-201ENST00000554393 KRT79Q5XKE5 535 aa11.52□□□□□ -0.57
PTCD2P1-201ENST00000554393 ARL6IP4Q66PJ3 421 aaKnown RBP11.52□□□□□ -0.57
PTCD2P1-201ENST00000554393 EP400NLQ6ZTU2 488 aa11.52□□□□□ -0.57
PTCD2P1-201ENST00000554393 ZBTB8OSQ8IWT0 167 aa11.52□□□□□ -0.57
PTCD2P1-201ENST00000554393 PLPP6Q8IY26 295 aa11.52□□□□□ -0.57
PTCD2P1-201ENST00000554393 HACE1Q8IYU2 909 aa11.52□□□□□ -0.57
PTCD2P1-201ENST00000554393 SMG8Q8ND04 991 aaKnown RBP11.52□□□□□ -0.57
PTCD2P1-201ENST00000554393 MICAL1Q8TDZ2 1067 aa11.52□□□□□ -0.57
PTCD2P1-201ENST00000554393 KIFAP3Q92845 792 aa11.52□□□□□ -0.57
PTCD2P1-201ENST00000554393 TMEM169Q96HH4 297 aa11.52□□□□□ -0.57
PTCD2P1-201ENST00000554393 MSLNLQ96KJ4 702 aa11.52□□□□□ -0.57
PTCD2P1-201ENST00000554393 TCF25Q9BQ70 676 aa11.52□□□□□ -0.57
PTCD2P1-201ENST00000554393 TMEM175Q9BSA9 504 aa11.52□□□□□ -0.57
PTCD2P1-201ENST00000554393 BACH2Q9BYV9 841 aa11.52□□□□□ -0.57
PTCD2P1-201ENST00000554393 BHMT2Q9H2M3 363 aa11.52□□□□□ -0.57
PTCD2P1-201ENST00000554393 FZD8Q9H461 694 aa11.52□□□□□ -0.57
PTCD2P1-201ENST00000554393 IGFLR1Q9H665 355 aa11.52□□□□□ -0.57
PTCD2P1-201ENST00000554393 NRDE2Q9H7Z3 1164 aa11.52□□□□□ -0.57
PTCD2P1-201ENST00000554393 TLE6Q9H808 572 aa11.52□□□□□ -0.57
PTCD2P1-201ENST00000554393 GPRC5CQ9NQ84 441 aa11.52□□□□□ -0.57
PTCD2P1-201ENST00000554393 ENTPD7Q9NQZ7 604 aa11.52□□□□□ -0.57
PTCD2P1-201ENST00000554393 PRMT7Q9NVM4 692 aaPredicted RBP11.52□□□□□ -0.57
PTCD2P1-201ENST00000554393 CD207Q9UJ71 328 aa11.52□□□□□ -0.57
PTCD2P1-201ENST00000554393 KIAA1024Q9UPX6 916 aa11.52□□□□□ -0.57
PTCD2P1-201ENST00000554393 INPP5FQ9Y2H2 1132 aa11.52□□□□□ -0.57
PTCD2P1-201ENST00000554393 IPPQ9Y573 584 aa11.52□□□□□ -0.57
PTCD2P1-201ENST00000554393 A0A1B0GUA9 196 aa11.51□□□□□ -0.57
PTCD2P1-201ENST00000554393 LINC01565O15544 149 aa11.51□□□□□ -0.57
PTCD2P1-201ENST00000554393 ZC3H11AO75152 810 aaKnown RBP eCLIP11.51□□□□□ -0.57
PTCD2P1-201ENST00000554393 GLP2RO95838 553 aa11.51□□□□□ -0.57
PTCD2P1-201ENST00000554393 BMP15O95972 392 aa11.51□□□□□ -0.57
PTCD2P1-201ENST00000554393 GALTP07902 379 aa11.51□□□□□ -0.57
PTCD2P1-201ENST00000554393 SRGAP2BP0DMP2 458 aa11.51□□□□□ -0.57
PTCD2P1-201ENST00000554393 ITGA4P13612 1032 aa11.51□□□□□ -0.57
PTCD2P1-201ENST00000554393 PDCP20941 246 aa11.51□□□□□ -0.57
PTCD2P1-201ENST00000554393 DLX2Q07687 328 aaPredicted RBP11.51□□□□□ -0.57
PTCD2P1-201ENST00000554393 SMC1AQ14683 1233 aaKnown RBP11.51□□□□□ -0.57
PTCD2P1-201ENST00000554393 IL17AQ16552 155 aa11.51□□□□□ -0.57
PTCD2P1-201ENST00000554393 HYIQ5T013 277 aa11.51□□□□□ -0.57
PTCD2P1-201ENST00000554393 PLPP4Q5VZY2 271 aa11.51□□□□□ -0.57
PTCD2P1-201ENST00000554393 LARP1BQ659C4 914 aaKnown RBP11.51□□□□□ -0.57
PTCD2P1-201ENST00000554393 SLC27A1Q6PCB7 646 aa11.51□□□□□ -0.57
PTCD2P1-201ENST00000554393 TMEM184AQ6ZMB5 413 aa11.51□□□□□ -0.57
PTCD2P1-201ENST00000554393 BRAPQ7Z569 592 aa11.51□□□□□ -0.57
PTCD2P1-201ENST00000554393 SMRP1Q8NCR6 262 aa11.51□□□□□ -0.57
PTCD2P1-201ENST00000554393 IGSF21Q96ID5 467 aa11.51□□□□□ -0.57
PTCD2P1-201ENST00000554393 CPB2Q96IY4 423 aa11.51□□□□□ -0.57
PTCD2P1-201ENST00000554393 EIF2AQ9BY44 585 aaKnown RBP11.51□□□□□ -0.57
PTCD2P1-201ENST00000554393 TRIM6Q9C030 488 aaPredicted RBP11.51□□□□□ -0.57
PTCD2P1-201ENST00000554393 DDX19AQ9NUU7 478 aaKnown RBP11.51□□□□□ -0.57
PTCD2P1-201ENST00000554393 CLEC1BQ9P126 229 aa11.51□□□□□ -0.57
PTCD2P1-201ENST00000554393 DNM3Q9UQ16 869 aa11.51□□□□□ -0.57
PTCD2P1-201ENST00000554393 GIT1Q9Y2X7 761 aa11.51□□□□□ -0.57
PTCD2P1-201ENST00000554393 PCDHGC5Q9Y5F6 944 aa11.51□□□□□ -0.57
PTCD2P1-201ENST00000554393 IRAK3Q9Y616 596 aa11.51□□□□□ -0.57
PTCD2P1-201ENST00000554393 WDFY4Q6ZS81 3184 aa11.51□□□□□ -0.57
PTCD2P1-201ENST00000554393 USP34Q70CQ2 3546 aa11.5□□□□□ -0.57
PTCD2P1-201ENST00000554393 B4GALT5O43286 388 aa11.5□□□□□ -0.57
PTCD2P1-201ENST00000554393 MBTPS2O43462 519 aa11.5□□□□□ -0.57
PTCD2P1-201ENST00000554393 SLC26A4O43511 780 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms