RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 UBA1P22314 1058 aaKnown RBP7.96□□□□□ -1.14
ATXN3-224ENST00000554040 TECP42680 631 aa7.96□□□□□ -1.14
ATXN3-224ENST00000554040 MGAT3Q09327 533 aa7.96□□□□□ -1.14
ATXN3-224ENST00000554040 ANGPT1Q15389 498 aa7.96□□□□□ -1.14
ATXN3-224ENST00000554040 PDE12Q6L8Q7 609 aaKnown RBP7.96□□□□□ -1.14
ATXN3-224ENST00000554040 RTN4RL1Q86UN2 441 aaPredicted RBP7.96□□□□□ -1.14
ATXN3-224ENST00000554040 VSIG10LQ86VR7 867 aa7.96□□□□□ -1.14
ATXN3-224ENST00000554040 NPAS4Q8IUM7 802 aa7.96□□□□□ -1.14
ATXN3-224ENST00000554040 RASGRP4Q8TDF6 673 aa7.96□□□□□ -1.14
ATXN3-224ENST00000554040 SEC62Q99442 399 aaKnown RBP7.96□□□□□ -1.14
ATXN3-224ENST00000554040 UBA5Q9GZZ9 404 aa7.96□□□□□ -1.14
ATXN3-224ENST00000554040 SMOC2Q9H3U7 446 aa7.96□□□□□ -1.14
ATXN3-224ENST00000554040 SRA1Q9HD15 236 aaKnown RBP7.96□□□□□ -1.14
ATXN3-224ENST00000554040 ANAPC4Q9UJX5 808 aa7.96□□□□□ -1.14
ATXN3-224ENST00000554040 MRPL11Q9Y3B7 192 aaKnown RBP7.96□□□□□ -1.14
ATXN3-224ENST00000554040 MAP1BP46821 2468 aaKnown RBP7.95□□□□□ -1.14
ATXN3-224ENST00000554040 C2CD4DB7Z1M9 353 aa7.95□□□□□ -1.14
ATXN3-224ENST00000554040 FSCN2O14926 492 aa7.95□□□□□ -1.14
ATXN3-224ENST00000554040 PI15O43692 258 aa7.95□□□□□ -1.14
ATXN3-224ENST00000554040 SMARCA5O60264 1052 aaPredicted RBP7.95□□□□□ -1.14
ATXN3-224ENST00000554040 STAG3L1P0CL83 205 aa7.95□□□□□ -1.14
ATXN3-224ENST00000554040 MYCLP12524 364 aaPredicted RBP7.95□□□□□ -1.14
ATXN3-224ENST00000554040 AOC1P19801 751 aa7.95□□□□□ -1.14
ATXN3-224ENST00000554040 ERVFC1P60507 584 aa7.95□□□□□ -1.14
ATXN3-224ENST00000554040 ARHGAP4P98171 946 aa7.95□□□□□ -1.14
ATXN3-224ENST00000554040 CDC37Q16543 378 aaPredicted RBP7.95□□□□□ -1.14
ATXN3-224ENST00000554040 PAN2Q504Q3 1202 aaKnown RBP7.95□□□□□ -1.14
ATXN3-224ENST00000554040 FBXO47Q5MNV8 452 aa7.95□□□□□ -1.14
ATXN3-224ENST00000554040 GPATCH4Q5T3I0 446 aaKnown RBP7.95□□□□□ -1.14
ATXN3-224ENST00000554040 TAF2Q6P1X5 1199 aa7.95□□□□□ -1.14
ATXN3-224ENST00000554040 CCDC105Q8IYK2 499 aa7.95□□□□□ -1.14
ATXN3-224ENST00000554040 AGGF1Q8N302 714 aaeCLIP7.95□□□□□ -1.14
ATXN3-224ENST00000554040 DTWD2Q8NBA8 298 aa7.95□□□□□ -1.14
ATXN3-224ENST00000554040 FLCNQ8NFG4 579 aa7.95□□□□□ -1.14
ATXN3-224ENST00000554040 PANK1Q8TE04 598 aa7.95□□□□□ -1.14
ATXN3-224ENST00000554040 LINC01599Q8WXQ3 324 aa7.95□□□□□ -1.14
ATXN3-224ENST00000554040 PIK3R5Q8WYR1 880 aa7.95□□□□□ -1.14
ATXN3-224ENST00000554040 TTC14Q96N46 770 aa7.95□□□□□ -1.14
ATXN3-224ENST00000554040 NECTIN4Q96NY8 510 aa7.95□□□□□ -1.14
ATXN3-224ENST00000554040 PDCD2LQ9BRP1 358 aa7.95□□□□□ -1.14
ATXN3-224ENST00000554040 APOL5Q9BWW9 433 aa7.95□□□□□ -1.14
ATXN3-224ENST00000554040 LRRCC1Q9C099 1032 aa7.95□□□□□ -1.14
ATXN3-224ENST00000554040 BCAS3Q9H6U6 928 aa7.95□□□□□ -1.14
ATXN3-224ENST00000554040 RNF112Q9ULX5 631 aa7.95□□□□□ -1.14
ATXN3-224ENST00000554040 PCDHB12Q9Y5F1 795 aa7.95□□□□□ -1.14
ATXN3-224ENST00000554040 RALGAPA2Q2PPJ7 1873 aa7.95□□□□□ -1.14
ATXN3-224ENST00000554040 NLRC5Q86WI3 1866 aa7.94□□□□□ -1.14
ATXN3-224ENST00000554040 ATG2AQ2TAZ0 1938 aa7.94□□□□□ -1.14
ATXN3-224ENST00000554040 FRYLO94915 3013 aa7.94□□□□□ -1.14
ATXN3-224ENST00000554040 NOP56O00567 594 aaKnown RBP7.94□□□□□ -1.14
ATXN3-224ENST00000554040 FOXP2O15409 715 aa7.94□□□□□ -1.14
ATXN3-224ENST00000554040 KIF4AO95239 1232 aa7.94□□□□□ -1.14
ATXN3-224ENST00000554040 WISP1O95388 367 aa7.94□□□□□ -1.14
ATXN3-224ENST00000554040 CFBP00751 764 aa7.94□□□□□ -1.14
ATXN3-224ENST00000554040 ASGR2P07307 311 aa7.94□□□□□ -1.14
ATXN3-224ENST00000554040 GOLGA8HP0CJ92 632 aa7.94□□□□□ -1.14
ATXN3-224ENST00000554040 NPR3P17342 541 aa7.94□□□□□ -1.14
ATXN3-224ENST00000554040 CWF19L1Q69YN2 538 aaKnown RBP7.94□□□□□ -1.14
ATXN3-224ENST00000554040 RUFY4Q6ZNE9 571 aa7.94□□□□□ -1.14
ATXN3-224ENST00000554040 TSHZ1Q6ZSZ6 1077 aa7.94□□□□□ -1.14
ATXN3-224ENST00000554040 STOX1Q6ZVD7 989 aa7.94□□□□□ -1.14
ATXN3-224ENST00000554040 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.94□□□□□ -1.14
ATXN3-224ENST00000554040 RSPH3Q86UC2 560 aa7.94□□□□□ -1.14
ATXN3-224ENST00000554040 MAP4K3Q8IVH8 894 aa7.94□□□□□ -1.14
ATXN3-224ENST00000554040 GPR152Q8TDT2 470 aa7.94□□□□□ -1.14
ATXN3-224ENST00000554040 LMBR1Q8WVP7 490 aa7.94□□□□□ -1.14
ATXN3-224ENST00000554040 RTP3Q9BQQ7 232 aa7.94□□□□□ -1.14
ATXN3-224ENST00000554040 FTHL17Q9BXU8 183 aa7.94□□□□□ -1.14
ATXN3-224ENST00000554040 RBSNQ9H1K0 784 aa7.94□□□□□ -1.14
ATXN3-224ENST00000554040 ADAM7Q9H2U9 754 aa7.94□□□□□ -1.14
ATXN3-224ENST00000554040 CPVLQ9H3G5 476 aa7.94□□□□□ -1.14
ATXN3-224ENST00000554040 POMKQ9H5K3 350 aa7.94□□□□□ -1.14
ATXN3-224ENST00000554040 AGO3Q9H9G7 860 aaKnown RBP7.94□□□□□ -1.14
ATXN3-224ENST00000554040 ZBTB40Q9NUA8 1239 aa7.94□□□□□ -1.14
ATXN3-224ENST00000554040 STIM2Q9P246 746 aa7.94□□□□□ -1.14
ATXN3-224ENST00000554040 SUPT16HQ9Y5B9 1047 aaKnown RBP7.94□□□□□ -1.14
ATXN3-224ENST00000554040 NRCAMQ92823 1304 aa7.94□□□□□ -1.14
ATXN3-224ENST00000554040 PKD1L2Q7Z442 2459 aa7.94□□□□□ -1.14
ATXN3-224ENST00000554040 FGF18O76093 207 aa7.93□□□□□ -1.14
ATXN3-224ENST00000554040 ARP10275 920 aa7.93□□□□□ -1.14
ATXN3-224ENST00000554040 CD52P31358 61 aa7.93□□□□□ -1.14
ATXN3-224ENST00000554040 HSD17B4P51659 736 aa7.93□□□□□ -1.14
ATXN3-224ENST00000554040 GHRHRQ02643 423 aa7.93□□□□□ -1.14
ATXN3-224ENST00000554040 ITIH3Q06033 890 aa7.93□□□□□ -1.14
ATXN3-224ENST00000554040 NEDD9Q14511 834 aa7.93□□□□□ -1.14
ATXN3-224ENST00000554040 PGM5Q15124 567 aa7.93□□□□□ -1.14
ATXN3-224ENST00000554040 ALX1Q15699 326 aa7.93□□□□□ -1.14
ATXN3-224ENST00000554040 QRICH1Q2TAL8 776 aa7.93□□□□□ -1.14
ATXN3-224ENST00000554040 RRP12Q5JTH9 1297 aaKnown RBP7.93□□□□□ -1.14
ATXN3-224ENST00000554040 SPOUT1Q5T280 376 aaKnown RBP7.93□□□□□ -1.14
ATXN3-224ENST00000554040 TSHZ3Q63HK5 1081 aa7.93□□□□□ -1.14
ATXN3-224ENST00000554040 CES5AQ6NT32 575 aa7.93□□□□□ -1.14
ATXN3-224ENST00000554040 LLGL2Q6P1M3 1020 aa7.93□□□□□ -1.14
ATXN3-224ENST00000554040 METTL7BQ6UX53 244 aa7.93□□□□□ -1.14
ATXN3-224ENST00000554040 ADGRF4Q8IZF3 695 aa7.93□□□□□ -1.14
ATXN3-224ENST00000554040 ZDHHC14Q8IZN3 488 aa7.93□□□□□ -1.14
ATXN3-224ENST00000554040 CYP2W1Q8TAV3 490 aa7.93□□□□□ -1.14
ATXN3-224ENST00000554040 GPATCH3Q96I76 525 aa7.93□□□□□ -1.14
ATXN3-224ENST00000554040 GPR20Q99678 358 aa7.93□□□□□ -1.14
ATXN3-224ENST00000554040 RASSF4Q9H2L5 321 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms