RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 FAM105AQ9NUU6 356 aa8.65□□□□□ -1.02
ABCD4-220ENST00000553998 GABBR1Q9UBS5 961 aa8.65□□□□□ -1.02
ABCD4-220ENST00000553998 DNAJB4Q9UDY4 337 aa8.65□□□□□ -1.02
ABCD4-220ENST00000553998 FBXO4Q9UKT5 387 aa8.65□□□□□ -1.02
ABCD4-220ENST00000553998 SSX2IPQ9Y2D8 614 aa8.65□□□□□ -1.02
ABCD4-220ENST00000553998 ACACBO00763 2458 aa8.65□□□□□ -1.02
ABCD4-220ENST00000553998 TPRP12270 2363 aaKnown RBP8.64□□□□□ -1.03
ABCD4-220ENST00000553998 CFAP47Q6ZTR5 3102 aa8.64□□□□□ -1.03
ABCD4-220ENST00000553998 CLUHO75153 1309 aa8.64□□□□□ -1.03
ABCD4-220ENST00000553998 CCDC195A0A1B0GUA6 201 aa8.64□□□□□ -1.03
ABCD4-220ENST00000553998 CCDC194A0A1B0GVG4 234 aa8.64□□□□□ -1.03
ABCD4-220ENST00000553998 MEIS3P2A8K0S8 358 aa8.64□□□□□ -1.03
ABCD4-220ENST00000553998 STK25O00506 426 aa8.64□□□□□ -1.03
ABCD4-220ENST00000553998 DTNBO60941 627 aa8.64□□□□□ -1.03
ABCD4-220ENST00000553998 DDHD2O94830 711 aa8.64□□□□□ -1.03
ABCD4-220ENST00000553998 SOD2P04179 222 aa8.64□□□□□ -1.03
ABCD4-220ENST00000553998 OATP04181 439 aa8.64□□□□□ -1.03
ABCD4-220ENST00000553998 ALDH2P05091 517 aa8.64□□□□□ -1.03
ABCD4-220ENST00000553998 DCNP07585 359 aaKnown RBP8.64□□□□□ -1.03
ABCD4-220ENST00000553998 LAMP2P13473 410 aa8.64□□□□□ -1.03
ABCD4-220ENST00000553998 ATXN1P54253 815 aaKnown RBP8.64□□□□□ -1.03
ABCD4-220ENST00000553998 KIAA0319Q5VV43 1072 aa8.64□□□□□ -1.03
ABCD4-220ENST00000553998 JAKMIP3Q5VZ66 844 aa8.64□□□□□ -1.03
ABCD4-220ENST00000553998 LARP1BQ659C4 914 aaKnown RBP8.64□□□□□ -1.03
ABCD4-220ENST00000553998 POTEGQ6S5H5 508 aa8.64□□□□□ -1.03
ABCD4-220ENST00000553998 AGMOQ6ZNB7 445 aa8.64□□□□□ -1.03
ABCD4-220ENST00000553998 NELL1Q92832 810 aa8.64□□□□□ -1.03
ABCD4-220ENST00000553998 LPPQ93052 612 aa8.64□□□□□ -1.03
ABCD4-220ENST00000553998 LENG9Q96B70 501 aa8.64□□□□□ -1.03
ABCD4-220ENST00000553998 RPS6KC1Q96S38 1066 aa8.64□□□□□ -1.03
ABCD4-220ENST00000553998 NAP1L4Q99733 375 aaKnown RBP8.64□□□□□ -1.03
ABCD4-220ENST00000553998 DDX23Q9BUQ8 820 aaKnown RBP8.64□□□□□ -1.03
ABCD4-220ENST00000553998 NIFKQ9BYG3 293 aaKnown RBP8.64□□□□□ -1.03
ABCD4-220ENST00000553998 OSBPL6Q9BZF3 934 aa8.64□□□□□ -1.03
ABCD4-220ENST00000553998 INO80BQ9C086 356 aaPredicted RBP8.64□□□□□ -1.03
ABCD4-220ENST00000553998 FOXP1Q9H334 677 aaPredicted RBP8.64□□□□□ -1.03
ABCD4-220ENST00000553998 ARHGEF3Q9NR81 526 aa8.64□□□□□ -1.03
ABCD4-220ENST00000553998 MRPL17Q9NRX2 175 aaKnown RBP8.64□□□□□ -1.03
ABCD4-220ENST00000553998 GJB4Q9NTQ9 266 aa8.64□□□□□ -1.03
ABCD4-220ENST00000553998 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.64□□□□□ -1.03
ABCD4-220ENST00000553998 KANSL3Q9P2N6 904 aa8.64□□□□□ -1.03
ABCD4-220ENST00000553998 ZFP37Q9Y6Q3 630 aaPredicted RBP8.64□□□□□ -1.03
ABCD4-220ENST00000553998 POTEMA6NI47 508 aa8.63□□□□□ -1.03
ABCD4-220ENST00000553998 PRR5-ARHGAP8B1AHC4 643 aa8.63□□□□□ -1.03
ABCD4-220ENST00000553998 WDR64B1ANS9 1081 aa8.63□□□□□ -1.03
ABCD4-220ENST00000553998 BTBD18B2RXH4 712 aa8.63□□□□□ -1.03
ABCD4-220ENST00000553998 H3BQV1 296 aa8.63□□□□□ -1.03
ABCD4-220ENST00000553998 NRP1O14786 923 aa8.63□□□□□ -1.03
ABCD4-220ENST00000553998 SPTLC1O15269 473 aa8.63□□□□□ -1.03
ABCD4-220ENST00000553998 INPPL1O15357 1258 aa8.63□□□□□ -1.03
ABCD4-220ENST00000553998 TEX28O15482 410 aa8.63□□□□□ -1.03
ABCD4-220ENST00000553998 EDIL3O43854 480 aa8.63□□□□□ -1.03
ABCD4-220ENST00000553998 KINO60870 393 aaKnown RBP8.63□□□□□ -1.03
ABCD4-220ENST00000553998 CSDE1O75534 798 aaKnown RBP8.63□□□□□ -1.03
ABCD4-220ENST00000553998 STBD1O95210 358 aa8.63□□□□□ -1.03
ABCD4-220ENST00000553998 TGM1P22735 817 aa8.63□□□□□ -1.03
ABCD4-220ENST00000553998 SFPQP23246 707 aaKnown RBP eCLIP8.63□□□□□ -1.03
ABCD4-220ENST00000553998 U2AF2P26368 475 aaKnown RBP eCLIP8.63□□□□□ -1.03
ABCD4-220ENST00000553998 GBP2P32456 591 aaPredicted RBP8.63□□□□□ -1.03
ABCD4-220ENST00000553998 ANP32AP39687 249 aaKnown RBP8.63□□□□□ -1.03
ABCD4-220ENST00000553998 USP11P51784 963 aa8.63□□□□□ -1.03
ABCD4-220ENST00000553998 ARHGAP8P85298 464 aa8.63□□□□□ -1.03
ABCD4-220ENST00000553998 DRP2Q13474 957 aa8.63□□□□□ -1.03
ABCD4-220ENST00000553998 HTR4Q13639 388 aa8.63□□□□□ -1.03
ABCD4-220ENST00000553998 VARS2Q5ST30 1063 aaKnown RBP8.63□□□□□ -1.03
ABCD4-220ENST00000553998 LILRA6Q6PI73 481 aa8.63□□□□□ -1.03
ABCD4-220ENST00000553998 ELMSAN1Q6PJG2 1045 aa8.63□□□□□ -1.03
ABCD4-220ENST00000553998 DCLRE1AQ6PJP8 1040 aa8.63□□□□□ -1.03
ABCD4-220ENST00000553998 MOXD1Q6UVY6 613 aa8.63□□□□□ -1.03
ABCD4-220ENST00000553998 ZNF410Q86VK4 478 aa8.63□□□□□ -1.03
ABCD4-220ENST00000553998 ZBTB44Q8NCP5 570 aa8.63□□□□□ -1.03
ABCD4-220ENST00000553998 PJA1Q8NG27 643 aa8.63□□□□□ -1.03
ABCD4-220ENST00000553998 NLRP7Q8WX94 980 aa8.63□□□□□ -1.03
ABCD4-220ENST00000553998 TNFRSF25Q93038 417 aa8.63□□□□□ -1.03
ABCD4-220ENST00000553998 PGBD4Q96DM1 585 aa8.63□□□□□ -1.03
ABCD4-220ENST00000553998 SHDQ96IW2 340 aa8.63□□□□□ -1.03
ABCD4-220ENST00000553998 ZNF668Q96K58 619 aaPredicted RBP8.63□□□□□ -1.03
ABCD4-220ENST00000553998 RIT2Q99578 217 aa8.63□□□□□ -1.03
ABCD4-220ENST00000553998 HERC2P3Q9BVR0 1158 aa8.63□□□□□ -1.03
ABCD4-220ENST00000553998 PLEKHA4Q9H4M7 779 aa8.63□□□□□ -1.03
ABCD4-220ENST00000553998 MAN1C1Q9NR34 630 aa8.63□□□□□ -1.03
ABCD4-220ENST00000553998 DISC1Q9NRI5 854 aa8.63□□□□□ -1.03
ABCD4-220ENST00000553998 CHST7Q9NS84 486 aa8.63□□□□□ -1.03
ABCD4-220ENST00000553998 ZDHHC7Q9NXF8 308 aa8.63□□□□□ -1.03
ABCD4-220ENST00000553998 CA14Q9ULX7 337 aa8.63□□□□□ -1.03
ABCD4-220ENST00000553998 FAN1Q9Y2M0 1017 aa8.63□□□□□ -1.03
ABCD4-220ENST00000553998 DENND4AQ7Z401 1863 aa8.62□□□□□ -1.03
ABCD4-220ENST00000553998 CNTNAP2Q9UHC6 1331 aa8.62□□□□□ -1.03
ABCD4-220ENST00000553998 A0A087WZ62 844 aa8.62□□□□□ -1.03
ABCD4-220ENST00000553998 ADAMTS3O15072 1205 aa8.62□□□□□ -1.03
ABCD4-220ENST00000553998 LILRB5O75023 590 aa8.62□□□□□ -1.03
ABCD4-220ENST00000553998 MAFO75444 373 aaPredicted RBP8.62□□□□□ -1.03
ABCD4-220ENST00000553998 ADH1AP07327 375 aa8.62□□□□□ -1.03
ABCD4-220ENST00000553998 GCFC2P16383 781 aaKnown RBP8.62□□□□□ -1.03
ABCD4-220ENST00000553998 SYT1P21579 422 aa8.62□□□□□ -1.03
ABCD4-220ENST00000553998 SFNP31947 248 aa8.62□□□□□ -1.03
ABCD4-220ENST00000553998 MAGEA9P43362 315 aa8.62□□□□□ -1.03
ABCD4-220ENST00000553998 TRAPPC10P48553 1259 aa8.62□□□□□ -1.03
ABCD4-220ENST00000553998 AFF1P51825 1210 aaKnown RBP8.62□□□□□ -1.03
ABCD4-220ENST00000553998 GUCY1B3Q02153 619 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms