RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 EEF1GP26641 437 aaKnown RBP15.86■□□□□ 0.13
SHMT2-210ENST00000553950 HOXD13P35453 343 aa15.86■□□□□ 0.13
SHMT2-210ENST00000553950 KCNA1Q09470 495 aa15.86■□□□□ 0.13
SHMT2-210ENST00000553950 NOLC1Q14978 699 aaKnown RBP eCLIP15.86■□□□□ 0.13
SHMT2-210ENST00000553950 UVSSAQ2YD98 709 aa15.86■□□□□ 0.13
SHMT2-210ENST00000553950 ZNF568Q3ZCX4 644 aa15.86■□□□□ 0.13
SHMT2-210ENST00000553950 ANKRD40Q6AI12 368 aa15.86■□□□□ 0.13
SHMT2-210ENST00000553950 MPZL3Q6UWV2 235 aa15.86■□□□□ 0.13
SHMT2-210ENST00000553950 LUZP1Q86V48 1076 aa15.86■□□□□ 0.13
SHMT2-210ENST00000553950 AGPAT5Q9NUQ2 364 aa15.86■□□□□ 0.13
SHMT2-210ENST00000553950 TNFSF13BQ9Y275 285 aa15.86■□□□□ 0.13
SHMT2-210ENST00000553950 ATP11BQ9Y2G3 1177 aa15.86■□□□□ 0.13
SHMT2-210ENST00000553950 STYXL1Q9Y6J8 313 aa15.86■□□□□ 0.13
SHMT2-210ENST00000553950 MAPK13O15264 365 aa15.85■□□□□ 0.13
SHMT2-210ENST00000553950 CLDN3O15551 220 aa15.85■□□□□ 0.13
SHMT2-210ENST00000553950 TSPAN1O60635 241 aa15.85■□□□□ 0.13
SHMT2-210ENST00000553950 MATR3P43243 847 aaKnown RBP eCLIP15.85■□□□□ 0.13
SHMT2-210ENST00000553950 PAK2Q13177 524 aa15.85■□□□□ 0.13
SHMT2-210ENST00000553950 ADAM9Q13443 819 aa15.85■□□□□ 0.13
SHMT2-210ENST00000553950 GSE1Q14687 1217 aa15.85■□□□□ 0.13
SHMT2-210ENST00000553950 LRRC55Q6ZSA7 311 aa15.85■□□□□ 0.13
SHMT2-210ENST00000553950 XXYLT1Q8NBI6 393 aa15.85■□□□□ 0.13
SHMT2-210ENST00000553950 RNF214Q8ND24 703 aa15.85■□□□□ 0.13
SHMT2-210ENST00000553950 WNT8BQ93098 351 aa15.85■□□□□ 0.13
SHMT2-210ENST00000553950 ACO2Q99798 780 aaKnown RBP15.85■□□□□ 0.13
SHMT2-210ENST00000553950 HIPK3Q9H422 1215 aa15.85■□□□□ 0.13
SHMT2-210ENST00000553950 MINDY3Q9H8M7 445 aa15.85■□□□□ 0.13
SHMT2-210ENST00000553950 METTL14Q9HCE5 456 aaKnown RBP15.85■□□□□ 0.13
SHMT2-210ENST00000553950 CHST12Q9NRB3 414 aa15.85■□□□□ 0.13
SHMT2-210ENST00000553950 ANKFY1Q9P2R3 1169 aa15.85■□□□□ 0.13
SHMT2-210ENST00000553950 BRCA2P51587 3418 aa15.85■□□□□ 0.13
SHMT2-210ENST00000553950 EXOC3O60645 756 aa15.84■□□□□ 0.13
SHMT2-210ENST00000553950 CHRNA1P02708 482 aa15.84■□□□□ 0.13
SHMT2-210ENST00000553950 TPM3P06753 285 aa15.84■□□□□ 0.13
SHMT2-210ENST00000553950 MCF2P10911 925 aa15.84■□□□□ 0.13
SHMT2-210ENST00000553950 RFC2P35250 354 aa15.84■□□□□ 0.13
SHMT2-210ENST00000553950 PSMC2P35998 433 aaKnown RBP15.84■□□□□ 0.13
SHMT2-210ENST00000553950 PMS1P54277 932 aaKnown RBP15.84■□□□□ 0.13
SHMT2-210ENST00000553950 POU5F1Q01860 360 aaKnown RBP15.84■□□□□ 0.13
SHMT2-210ENST00000553950 TLE2Q04725 743 aa15.84■□□□□ 0.13
SHMT2-210ENST00000553950 PPP2R3AQ06190 1150 aa15.84■□□□□ 0.13
SHMT2-210ENST00000553950 ENPEPQ07075 957 aa15.84■□□□□ 0.13
SHMT2-210ENST00000553950 MCL1Q07820 350 aa15.84■□□□□ 0.13
SHMT2-210ENST00000553950 NCAPHQ15003 741 aa15.84■□□□□ 0.13
SHMT2-210ENST00000553950 AMHR2Q16671 573 aa15.84■□□□□ 0.13
SHMT2-210ENST00000553950 FBXO47Q5MNV8 452 aa15.84■□□□□ 0.13
SHMT2-210ENST00000553950 ZNF618Q5T7W0 954 aa15.84■□□□□ 0.13
SHMT2-210ENST00000553950 CDKAL1Q5VV42 579 aa15.84■□□□□ 0.13
SHMT2-210ENST00000553950 SLC27A1Q6PCB7 646 aa15.84■□□□□ 0.13
SHMT2-210ENST00000553950 FILIP1Q7Z7B0 1213 aa15.84■□□□□ 0.13
SHMT2-210ENST00000553950 UBE2Q1Q7Z7E8 422 aa15.84■□□□□ 0.13
SHMT2-210ENST00000553950 GAS2L3Q86XJ1 694 aa15.84■□□□□ 0.13
SHMT2-210ENST00000553950 HACE1Q8IYU2 909 aa15.84■□□□□ 0.13
SHMT2-210ENST00000553950 GPD1LQ8N335 351 aa15.84■□□□□ 0.13
SHMT2-210ENST00000553950 ZNF668Q96K58 619 aaPredicted RBP15.84■□□□□ 0.13
SHMT2-210ENST00000553950 DUSP9Q99956 384 aaKnown RBP15.84■□□□□ 0.13
SHMT2-210ENST00000553950 TCHPQ9BT92 498 aa15.84■□□□□ 0.13
SHMT2-210ENST00000553950 HTATIP2Q9BUP3 242 aa15.84■□□□□ 0.13
SHMT2-210ENST00000553950 NOC4LQ9BVI4 516 aaKnown RBP15.84■□□□□ 0.13
SHMT2-210ENST00000553950 TARS2Q9BW92 718 aaKnown RBP15.84■□□□□ 0.13
SHMT2-210ENST00000553950 HSPBP1Q9NZL4 362 aa15.84■□□□□ 0.13
SHMT2-210ENST00000553950 PIN4Q9Y237 131 aaKnown RBP15.84■□□□□ 0.13
SHMT2-210ENST00000553950 ANK1P16157 1881 aa15.83■□□□□ 0.12
SHMT2-210ENST00000553950 PDCD11Q14690 1871 aaKnown RBP15.83■□□□□ 0.12
SHMT2-210ENST00000553950 OGTO15294 1046 aa15.83■□□□□ 0.12
SHMT2-210ENST00000553950 ARF4P18085 180 aaPredicted RBP15.83■□□□□ 0.12
SHMT2-210ENST00000553950 CDK11BP21127 795 aaKnown RBP15.83■□□□□ 0.12
SHMT2-210ENST00000553950 PROZP22891 400 aa15.83■□□□□ 0.12
SHMT2-210ENST00000553950 RAB27AP51159 221 aa15.83■□□□□ 0.12
SHMT2-210ENST00000553950 CYP2J2P51589 502 aa15.83■□□□□ 0.12
SHMT2-210ENST00000553950 MARSP56192 900 aaKnown RBP15.83■□□□□ 0.12
SHMT2-210ENST00000553950 FAAP100Q0VG06 881 aa15.83■□□□□ 0.12
SHMT2-210ENST00000553950 CCDC40Q4G0X9 1142 aa15.83■□□□□ 0.12
SHMT2-210ENST00000553950 FAM228AQ86W67 206 aa15.83■□□□□ 0.12
SHMT2-210ENST00000553950 TMEM40Q8WWA1 233 aa15.83■□□□□ 0.12
SHMT2-210ENST00000553950 APBB2Q92870 758 aa15.83■□□□□ 0.12
SHMT2-210ENST00000553950 CNOT6LQ96LI5 555 aaKnown RBP15.83■□□□□ 0.12
SHMT2-210ENST00000553950 MSTO1Q9BUK6 570 aa15.83■□□□□ 0.12
SHMT2-210ENST00000553950 SRRTQ9BXP5 876 aaKnown RBP15.83■□□□□ 0.12
SHMT2-210ENST00000553950 FTHL17Q9BXU8 183 aa15.83■□□□□ 0.12
SHMT2-210ENST00000553950 TRIM6Q9C030 488 aaPredicted RBP15.83■□□□□ 0.12
SHMT2-210ENST00000553950 RBSNQ9H1K0 784 aa15.83■□□□□ 0.12
SHMT2-210ENST00000553950 DMAC2Q9NW81 257 aa15.83■□□□□ 0.12
SHMT2-210ENST00000553950 AGO2Q9UKV8 859 aaKnown RBP15.83■□□□□ 0.12
SHMT2-210ENST00000553950 TBX21Q9UL17 535 aa15.83■□□□□ 0.12
SHMT2-210ENST00000553950 MICAL3Q7RTP6 2002 aa15.82■□□□□ 0.12
SHMT2-210ENST00000553950 A0A0B4J269 797 aa15.82■□□□□ 0.12
SHMT2-210ENST00000553950 A0A1B0GUA9 196 aa15.82■□□□□ 0.12
SHMT2-210ENST00000553950 FSD2A1L4K1 749 aa15.82■□□□□ 0.12
SHMT2-210ENST00000553950 KCNJ18B7U540 433 aa15.82■□□□□ 0.12
SHMT2-210ENST00000553950 CLIC2O15247 247 aa15.82■□□□□ 0.12
SHMT2-210ENST00000553950 EXTL3O43909 919 aa15.82■□□□□ 0.12
SHMT2-210ENST00000553950 GHRP10912 638 aa15.82■□□□□ 0.12
SHMT2-210ENST00000553950 SKIP12755 728 aa15.82■□□□□ 0.12
SHMT2-210ENST00000553950 KRT13P13646 458 aa15.82■□□□□ 0.12
SHMT2-210ENST00000553950 ZNF18P17022 549 aa15.82■□□□□ 0.12
SHMT2-210ENST00000553950 ZSCAN20P17040 1043 aaPredicted RBP15.82■□□□□ 0.12
SHMT2-210ENST00000553950 EN2P19622 333 aaPredicted RBP15.82■□□□□ 0.12
SHMT2-210ENST00000553950 MRE11P49959 708 aa15.82■□□□□ 0.12
SHMT2-210ENST00000553950 KCNJ12Q14500 433 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms