RNA–Protein interactions for RNA: ENST00000553945.1

NEK9-203, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-203ENST00000553945 SPIRE2Q8WWL2 714 aa25.62■■□□□ 1.69
NEK9-203ENST00000553945 NTPCRQ9BSD7 190 aaKnown RBP25.62■■□□□ 1.69
NEK9-203ENST00000553945 APOL6Q9BWW8 343 aa25.62■■□□□ 1.69
NEK9-203ENST00000553945 PLVAPQ9BX97 442 aa25.62■■□□□ 1.69
NEK9-203ENST00000553945 ZHX3Q9H4I2 956 aa25.62■■□□□ 1.69
NEK9-203ENST00000553945 PDZD7Q9H5P4 517 aa25.62■■□□□ 1.69
NEK9-203ENST00000553945 TMEM134Q9H6X4 195 aa25.62■■□□□ 1.69
NEK9-203ENST00000553945 CWH43Q9H720 699 aa25.62■■□□□ 1.69
NEK9-203ENST00000553945 AAASQ9NRG9 546 aa25.62■■□□□ 1.69
NEK9-203ENST00000553945 LARSQ9P2J5 1176 aaKnown RBP25.62■■□□□ 1.69
NEK9-203ENST00000553945 ARHGAP28Q9P2N2 729 aa25.62■■□□□ 1.69
NEK9-203ENST00000553945 HES2Q9Y543 173 aa25.62■■□□□ 1.69
NEK9-203ENST00000553945 PCDHB12Q9Y5F1 795 aa25.62■■□□□ 1.69
NEK9-203ENST00000553945 TBCAO75347 108 aaKnown RBP25.61■■□□□ 1.69
NEK9-203ENST00000553945 OFD1O75665 1012 aa25.61■■□□□ 1.69
NEK9-203ENST00000553945 POU3F3P20264 500 aaPredicted RBP25.61■■□□□ 1.69
NEK9-203ENST00000553945 NOMO2Q5JPE7 1267 aa25.61■■□□□ 1.69
NEK9-203ENST00000553945 NT5DC1Q5TFE4 455 aa25.61■■□□□ 1.69
NEK9-203ENST00000553945 HACE1Q8IYU2 909 aa25.61■■□□□ 1.69
NEK9-203ENST00000553945 MYCT1Q8N699 235 aa25.61■■□□□ 1.69
NEK9-203ENST00000553945 SPATA32Q96LK8 384 aa25.61■■□□□ 1.69
NEK9-203ENST00000553945 MRPL9Q9BYD2 267 aaKnown RBP25.61■■□□□ 1.69
NEK9-203ENST00000553945 RSAD1Q9HA92 442 aa25.61■■□□□ 1.69
NEK9-203ENST00000553945 PRUNE2Q8WUY3 3088 aa25.61■■□□□ 1.69
NEK9-203ENST00000553945 LAG3P18627 525 aa25.6■■□□□ 1.69
NEK9-203ENST00000553945 NUCB2P80303 420 aa25.6■■□□□ 1.69
NEK9-203ENST00000553945 DYMQ7RTS9 669 aa25.6■■□□□ 1.69
NEK9-203ENST00000553945 COLGALT1Q8NBJ5 622 aa25.6■■□□□ 1.69
NEK9-203ENST00000553945 URGCPQ8TCY9 931 aa25.6■■□□□ 1.69
NEK9-203ENST00000553945 LEO1Q8WVC0 666 aaPredicted RBP25.6■■□□□ 1.69
NEK9-203ENST00000553945 RNF39Q9H2S5 420 aa25.6■■□□□ 1.69
NEK9-203ENST00000553945 NXF3Q9H4D5 531 aaKnown RBP25.6■■□□□ 1.69
NEK9-203ENST00000553945 PARVGQ9HBI0 331 aa25.6■■□□□ 1.69
NEK9-203ENST00000553945 LMCD1Q9NZU5 365 aa25.6■■□□□ 1.69
NEK9-203ENST00000553945 STRN3Q13033 797 aa25.59■■□□□ 1.69
NEK9-203ENST00000553945 PTPROQ16827 1216 aa25.59■■□□□ 1.69
NEK9-203ENST00000553945 ATF7IP2Q5U623 682 aa25.59■■□□□ 1.69
NEK9-203ENST00000553945 EEF1DP3Q658K8 133 aa25.59■■□□□ 1.69
NEK9-203ENST00000553945 TAS1R3Q7RTX0 852 aa25.59■■□□□ 1.69
NEK9-203ENST00000553945 KLHL23Q8NBE8 558 aa25.59■■□□□ 1.69
NEK9-203ENST00000553945 TMEM161BQ8NDZ6 487 aa25.59■■□□□ 1.69
NEK9-203ENST00000553945 RSPH1Q8WYR4 309 aa25.59■■□□□ 1.69
NEK9-203ENST00000553945 P2RX5Q93086 422 aa25.59■■□□□ 1.69
NEK9-203ENST00000553945 ADPGKQ9BRR6 497 aa25.59■■□□□ 1.69
NEK9-203ENST00000553945 MRPL4Q9BYD3 311 aaKnown RBP25.59■■□□□ 1.69
NEK9-203ENST00000553945 ALG13Q9NP73 1137 aaKnown RBP25.59■■□□□ 1.69
NEK9-203ENST00000553945 UBN1Q9NPG3 1134 aa25.59■■□□□ 1.69
NEK9-203ENST00000553945 FAM13BQ9NYF5 915 aa25.59■■□□□ 1.69
NEK9-203ENST00000553945 MYMKA6NI61 221 aa25.58■■□□□ 1.69
NEK9-203ENST00000553945 GRM6O15303 877 aa25.58■■□□□ 1.69
NEK9-203ENST00000553945 ZNF131P52739 623 aa25.58■■□□□ 1.69
NEK9-203ENST00000553945 RNASELQ05823 741 aaKnown RBP25.58■■□□□ 1.69
NEK9-203ENST00000553945 DDX12PQ92771 950 aa25.58■■□□□ 1.69
NEK9-203ENST00000553945 DHX58Q96C10 678 aa25.58■■□□□ 1.69
NEK9-203ENST00000553945 TBC1D13Q9NVG8 400 aa25.58■■□□□ 1.69
NEK9-203ENST00000553945 PLAGL2Q9UPG8 496 aa25.58■■□□□ 1.69
NEK9-203ENST00000553945 MAPTP10636 758 aaKnown RBP25.57■■□□□ 1.68
NEK9-203ENST00000553945 AKAP5P24588 427 aa25.57■■□□□ 1.68
NEK9-203ENST00000553945 AFF1P51825 1210 aaKnown RBP25.57■■□□□ 1.68
NEK9-203ENST00000553945 NCKAP1LP55160 1127 aa25.57■■□□□ 1.68
NEK9-203ENST00000553945 RESP18Q5W5W9 173 aa25.57■■□□□ 1.68
NEK9-203ENST00000553945 THNSL1Q8IYQ7 743 aa25.57■■□□□ 1.68
NEK9-203ENST00000553945 MRPL38Q96DV4 380 aaKnown RBP25.57■■□□□ 1.68
NEK9-203ENST00000553945 ZNF558Q96NG5 402 aa25.57■■□□□ 1.68
NEK9-203ENST00000553945 ACO2Q99798 780 aaKnown RBP25.57■■□□□ 1.68
NEK9-203ENST00000553945 PARP2Q9UGN5 583 aa25.57■■□□□ 1.68
NEK9-203ENST00000553945 ARL5CA6NH57 179 aa25.56■■□□□ 1.68
NEK9-203ENST00000553945 H0YCG3 227 aa25.56■■□□□ 1.68
NEK9-203ENST00000553945 TRAK2O60296 914 aa25.56■■□□□ 1.68
NEK9-203ENST00000553945 POMCP01189 267 aa25.56■■□□□ 1.68
NEK9-203ENST00000553945 ITGB1P05556 798 aa25.56■■□□□ 1.68
NEK9-203ENST00000553945 PBX3P40426 434 aa25.56■■□□□ 1.68
NEK9-203ENST00000553945 CSPP1Q1MSJ5 1256 aa25.56■■□□□ 1.68
NEK9-203ENST00000553945 DCAF4L1Q3SXM0 396 aa25.56■■□□□ 1.68
NEK9-203ENST00000553945 KCNT2Q6UVM3 1135 aa25.56■■□□□ 1.68
NEK9-203ENST00000553945 HAUS6Q7Z4H7 955 aa25.56■■□□□ 1.68
NEK9-203ENST00000553945 IQUBQ8NA54 791 aa25.56■■□□□ 1.68
NEK9-203ENST00000553945 STAMQ92783 540 aa25.56■■□□□ 1.68
NEK9-203ENST00000553945 GAD1Q99259 594 aa25.56■■□□□ 1.68
NEK9-203ENST00000553945 TARS2Q9BW92 718 aaKnown RBP25.56■■□□□ 1.68
NEK9-203ENST00000553945 GBP3Q9H0R5 595 aa25.56■■□□□ 1.68
NEK9-203ENST00000553945 TNFSF13BQ9Y275 285 aa25.56■■□□□ 1.68
NEK9-203ENST00000553945 GIT1Q9Y2X7 761 aa25.56■■□□□ 1.68
NEK9-203ENST00000553945 PLXNA4Q9HCM2 1894 aa25.55■■□□□ 1.68
NEK9-203ENST00000553945 TCHHQ07283 1943 aa25.55■■□□□ 1.68
NEK9-203ENST00000553945 K7ENM7 598 aa25.55■■□□□ 1.68
NEK9-203ENST00000553945 POLR2DO15514 142 aaKnown RBP25.55■■□□□ 1.68
NEK9-203ENST00000553945 ZC3H11AO75152 810 aaKnown RBP eCLIP25.55■■□□□ 1.68
NEK9-203ENST00000553945 CSPG5O95196 566 aa25.55■■□□□ 1.68
NEK9-203ENST00000553945 MLH1P40692 756 aa25.55■■□□□ 1.68
NEK9-203ENST00000553945 E2F4Q16254 413 aa25.55■■□□□ 1.68
NEK9-203ENST00000553945 APBB1IPQ7Z5R6 666 aaPredicted RBP25.55■■□□□ 1.68
NEK9-203ENST00000553945 FAM178BQ8IXR5 827 aa25.55■■□□□ 1.68
NEK9-203ENST00000553945 SPPL3Q8TCT6 385 aa25.55■■□□□ 1.68
NEK9-203ENST00000553945 SCAND2PQ9GZW5 306 aaPredicted RBP25.55■■□□□ 1.68
NEK9-203ENST00000553945 LMAN2LQ9H0V9 348 aa25.55■■□□□ 1.68
NEK9-203ENST00000553945 CUEDC2Q9H467 287 aa25.55■■□□□ 1.68
NEK9-203ENST00000553945 KANSL3Q9P2N6 904 aa25.55■■□□□ 1.68
NEK9-203ENST00000553945 FGF18O76093 207 aa25.54■■□□□ 1.68
NEK9-203ENST00000553945 BCAR1P56945 870 aa25.54■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms