RNA–Protein interactions for RNA: ENST00000553823.5

NEK9-202, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-202ENST00000553823 PTGISQ16647 500 aa12.85□□□□□ -0.35
NEK9-202ENST00000553823 RPAINQ86UA6 219 aa12.85□□□□□ -0.35
NEK9-202ENST00000553823 SLC43A3Q8NBI5 491 aa12.85□□□□□ -0.35
NEK9-202ENST00000553823 XXYLT1Q8NBI6 393 aa12.85□□□□□ -0.35
NEK9-202ENST00000553823 POMGNT1Q8WZA1 660 aa12.85□□□□□ -0.35
NEK9-202ENST00000553823 PRIMPOLQ96LW4 560 aa12.85□□□□□ -0.35
NEK9-202ENST00000553823 ACO2Q99798 780 aaKnown RBP12.85□□□□□ -0.35
NEK9-202ENST00000553823 SEZ6LQ9BYH1 1024 aa12.85□□□□□ -0.35
NEK9-202ENST00000553823 CRISPLD2Q9H0B8 497 aa12.85□□□□□ -0.35
NEK9-202ENST00000553823 VPS16Q9H269 839 aa12.85□□□□□ -0.35
NEK9-202ENST00000553823 PCIF1Q9H4Z3 704 aa12.85□□□□□ -0.35
NEK9-202ENST00000553823 MINDY3Q9H8M7 445 aa12.85□□□□□ -0.35
NEK9-202ENST00000553823 METTL14Q9HCE5 456 aaKnown RBP12.85□□□□□ -0.35
NEK9-202ENST00000553823 RTN4Q9NQC3 1192 aaKnown RBP12.85□□□□□ -0.35
NEK9-202ENST00000553823 ARMCX3Q9UH62 379 aaPredicted RBP12.85□□□□□ -0.35
NEK9-202ENST00000553823 GINS2Q9Y248 185 aa12.85□□□□□ -0.35
NEK9-202ENST00000553823 USP20Q9Y2K6 914 aa12.85□□□□□ -0.35
NEK9-202ENST00000553823 STYXL1Q9Y6J8 313 aa12.85□□□□□ -0.35
NEK9-202ENST00000553823 M0QZ92 97 aa12.84□□□□□ -0.35
NEK9-202ENST00000553823 ARVCFO00192 962 aa12.84□□□□□ -0.35
NEK9-202ENST00000553823 KIAA0391O15091 583 aaKnown RBP12.84□□□□□ -0.35
NEK9-202ENST00000553823 CSDE1O75534 798 aaKnown RBP12.84□□□□□ -0.35
NEK9-202ENST00000553823 TOM1L1O75674 476 aa12.84□□□□□ -0.35
NEK9-202ENST00000553823 SGPL1O95470 568 aa12.84□□□□□ -0.35
NEK9-202ENST00000553823 IQCF3P0C7M6 154 aa12.84□□□□□ -0.35
NEK9-202ENST00000553823 CDC25BP30305 580 aa12.84□□□□□ -0.35
NEK9-202ENST00000553823 DEKP35659 375 aaKnown RBP12.84□□□□□ -0.35
NEK9-202ENST00000553823 MATR3P43243 847 aaKnown RBP eCLIP12.84□□□□□ -0.35
NEK9-202ENST00000553823 MRPS6P82932 125 aaKnown RBP12.84□□□□□ -0.35
NEK9-202ENST00000553823 CCDC173Q0VFZ6 552 aa12.84□□□□□ -0.35
NEK9-202ENST00000553823 NR1I3Q14994 352 aa12.84□□□□□ -0.35
NEK9-202ENST00000553823 MAN2A1Q16706 1144 aa12.84□□□□□ -0.35
NEK9-202ENST00000553823 TMEM132AQ24JP5 1023 aa12.84□□□□□ -0.35
NEK9-202ENST00000553823 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.84□□□□□ -0.35
NEK9-202ENST00000553823 TRIM59Q8IWR1 403 aa12.84□□□□□ -0.35
NEK9-202ENST00000553823 FAM186BQ8IYM0 893 aa12.84□□□□□ -0.35
NEK9-202ENST00000553823 U2AF1L4Q8WU68 220 aaKnown RBP12.84□□□□□ -0.35
NEK9-202ENST00000553823 OSMRQ99650 979 aa12.84□□□□□ -0.35
NEK9-202ENST00000553823 NOC4LQ9BVI4 516 aaKnown RBP12.84□□□□□ -0.35
NEK9-202ENST00000553823 NOD1Q9Y239 953 aa12.84□□□□□ -0.35
NEK9-202ENST00000553823 TTLL13PA6NNM8 815 aa12.83□□□□□ -0.36
NEK9-202ENST00000553823 LGALS16A8MUM7 142 aa12.83□□□□□ -0.36
NEK9-202ENST00000553823 MAPK13O15264 365 aa12.83□□□□□ -0.36
NEK9-202ENST00000553823 CLDN3O15551 220 aa12.83□□□□□ -0.36
NEK9-202ENST00000553823 B4GALT5O43286 388 aa12.83□□□□□ -0.36
NEK9-202ENST00000553823 ERLIN2O94905 339 aa12.83□□□□□ -0.36
NEK9-202ENST00000553823 TFRCP02786 760 aaKnown RBP12.83□□□□□ -0.36
NEK9-202ENST00000553823 DARSP14868 501 aaKnown RBP12.83□□□□□ -0.36
NEK9-202ENST00000553823 CRYBB1P53674 252 aaPredicted RBP12.83□□□□□ -0.36
NEK9-202ENST00000553823 PTK7Q13308 1070 aa12.83□□□□□ -0.36
NEK9-202ENST00000553823 HSP90AA2PQ14568 343 aaPredicted RBP12.83□□□□□ -0.36
NEK9-202ENST00000553823 SNX17Q15036 470 aa12.83□□□□□ -0.36
NEK9-202ENST00000553823 PCBP1Q15365 356 aaKnown RBP eCLIP12.83□□□□□ -0.36
NEK9-202ENST00000553823 AMHR2Q16671 573 aa12.83□□□□□ -0.36
NEK9-202ENST00000553823 ATF7IP2Q5U623 682 aa12.83□□□□□ -0.36
NEK9-202ENST00000553823 TSHZ1Q6ZSZ6 1077 aa12.83□□□□□ -0.36
NEK9-202ENST00000553823 GPD1LQ8N335 351 aa12.83□□□□□ -0.36
NEK9-202ENST00000553823 WNT8BQ93098 351 aa12.83□□□□□ -0.36
NEK9-202ENST00000553823 SAAL1Q96ER3 474 aa12.83□□□□□ -0.36
NEK9-202ENST00000553823 BORCS6Q96GS4 357 aa12.83□□□□□ -0.36
NEK9-202ENST00000553823 PDLIM2Q96JY6 352 aa12.83□□□□□ -0.36
NEK9-202ENST00000553823 ZBTB45Q96K62 511 aaPredicted RBP12.83□□□□□ -0.36
NEK9-202ENST00000553823 PPP1R9BQ96SB3 815 aa12.83□□□□□ -0.36
NEK9-202ENST00000553823 TCHPQ9BT92 498 aa12.83□□□□□ -0.36
NEK9-202ENST00000553823 CELF4Q9BZC1 486 aaKnown RBP12.83□□□□□ -0.36
NEK9-202ENST00000553823 CDHR5Q9HBB8 845 aa12.83□□□□□ -0.36
NEK9-202ENST00000553823 KIAA1586Q9HCI6 787 aa12.83□□□□□ -0.36
NEK9-202ENST00000553823 TRMT13Q9NUP7 481 aaKnown RBP12.83□□□□□ -0.36
NEK9-202ENST00000553823 INTS13Q9NVM9 706 aa12.83□□□□□ -0.36
NEK9-202ENST00000553823 ANKFY1Q9P2R3 1169 aa12.83□□□□□ -0.36
NEK9-202ENST00000553823 AGO2Q9UKV8 859 aaKnown RBP12.83□□□□□ -0.36
NEK9-202ENST00000553823 TNFSF13BQ9Y275 285 aa12.83□□□□□ -0.36
NEK9-202ENST00000553823 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.83□□□□□ -0.36
NEK9-202ENST00000553823 TRPV2Q9Y5S1 764 aa12.83□□□□□ -0.36
NEK9-202ENST00000553823 CNTNAP2Q9UHC6 1331 aa12.83□□□□□ -0.36
NEK9-202ENST00000553823 DNAH12Q6ZR08 3092 aa12.82□□□□□ -0.36
NEK9-202ENST00000553823 A0A0B4J269 797 aa12.82□□□□□ -0.36
NEK9-202ENST00000553823 GOLGA8IPA6NC78 632 aa12.82□□□□□ -0.36
NEK9-202ENST00000553823 GOLGA8JA6NMD2 632 aa12.82□□□□□ -0.36
NEK9-202ENST00000553823 PES1O00541 588 aaKnown RBP12.82□□□□□ -0.36
NEK9-202ENST00000553823 TEX33O43247 280 aa12.82□□□□□ -0.36
NEK9-202ENST00000553823 EXTL3O43909 919 aa12.82□□□□□ -0.36
NEK9-202ENST00000553823 TSPAN1O60635 241 aa12.82□□□□□ -0.36
NEK9-202ENST00000553823 LDHAP00338 332 aaKnown RBP12.82□□□□□ -0.36
NEK9-202ENST00000553823 KRT13P13646 458 aa12.82□□□□□ -0.36
NEK9-202ENST00000553823 PROZP22891 400 aa12.82□□□□□ -0.36
NEK9-202ENST00000553823 EIF4BP23588 611 aaKnown RBP12.82□□□□□ -0.36
NEK9-202ENST00000553823 CDK7P50613 346 aa12.82□□□□□ -0.36
NEK9-202ENST00000553823 PPP2R3AQ06190 1150 aa12.82□□□□□ -0.36
NEK9-202ENST00000553823 MCL1Q07820 350 aa12.82□□□□□ -0.36
NEK9-202ENST00000553823 NCBP1Q09161 790 aaKnown RBP12.82□□□□□ -0.36
NEK9-202ENST00000553823 SNRNP35Q16560 246 aaKnown RBP12.82□□□□□ -0.36
NEK9-202ENST00000553823 VWA3BQ502W6 1294 aa12.82□□□□□ -0.36
NEK9-202ENST00000553823 MIIPQ5JXC2 388 aa12.82□□□□□ -0.36
NEK9-202ENST00000553823 MPZL3Q6UWV2 235 aa12.82□□□□□ -0.36
NEK9-202ENST00000553823 INTS8Q75QN2 995 aaKnown RBP12.82□□□□□ -0.36
NEK9-202ENST00000553823 CATSPER4Q7RTX7 472 aa12.82□□□□□ -0.36
NEK9-202ENST00000553823 DRC7Q8IY82 874 aa12.82□□□□□ -0.36
NEK9-202ENST00000553823 RDH13Q8NBN7 331 aa12.82□□□□□ -0.36
NEK9-202ENST00000553823 ZSWIM2Q8NEG5 633 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms