RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 OR5M3Q8NGP4 307 aa4.56□□□□□ -1.68
VRK1-202ENST00000553683 ST8SIA2Q92186 375 aa4.56□□□□□ -1.68
VRK1-202ENST00000553683 ZNF503Q96F45 646 aa4.56□□□□□ -1.68
VRK1-202ENST00000553683 TMEM176AQ96HP8 235 aa4.56□□□□□ -1.68
VRK1-202ENST00000553683 PRDM12Q9H4Q4 367 aa4.56□□□□□ -1.68
VRK1-202ENST00000553683 GREM2Q9H772 168 aa4.56□□□□□ -1.68
VRK1-202ENST00000553683 IFT122Q9HBG6 1241 aa4.56□□□□□ -1.68
VRK1-202ENST00000553683 C14orf119Q9NWQ9 140 aa4.56□□□□□ -1.68
VRK1-202ENST00000553683 PARPBPQ9NWS1 579 aa4.56□□□□□ -1.68
VRK1-202ENST00000553683 DPP7Q9UHL4 492 aa4.56□□□□□ -1.68
VRK1-202ENST00000553683 B5MCH6 92 aa4.55□□□□□ -1.68
VRK1-202ENST00000553683 PPFIA4O75335 1185 aa4.55□□□□□ -1.68
VRK1-202ENST00000553683 CFBP00751 764 aa4.55□□□□□ -1.68
VRK1-202ENST00000553683 MTNR1BP49286 362 aa4.55□□□□□ -1.68
VRK1-202ENST00000553683 RABGGTBP53611 331 aa4.55□□□□□ -1.68
VRK1-202ENST00000553683 SCAND1P57086 179 aa4.55□□□□□ -1.68
VRK1-202ENST00000553683 MALLQ13021 153 aa4.55□□□□□ -1.68
VRK1-202ENST00000553683 RRP1BQ14684 758 aaKnown RBP4.55□□□□□ -1.68
VRK1-202ENST00000553683 ACAP1Q15027 740 aa4.55□□□□□ -1.68
VRK1-202ENST00000553683 MST1LQ2TV78 715 aa4.55□□□□□ -1.68
VRK1-202ENST00000553683 INAVAQ3KP66 663 aa4.55□□□□□ -1.68
VRK1-202ENST00000553683 USP39Q53GS9 565 aaKnown RBP4.55□□□□□ -1.68
VRK1-202ENST00000553683 MUM1L1Q5H9M0 696 aa4.55□□□□□ -1.68
VRK1-202ENST00000553683 DRICH1Q6PGQ1 229 aaPredicted RBP4.55□□□□□ -1.68
VRK1-202ENST00000553683 SPRED1Q7Z699 444 aa4.55□□□□□ -1.68
VRK1-202ENST00000553683 C1orf210Q8IVY1 113 aa4.55□□□□□ -1.68
VRK1-202ENST00000553683 MSL3Q8N5Y2 521 aaKnown RBP4.55□□□□□ -1.68
VRK1-202ENST00000553683 IL17DQ8TAD2 202 aa4.55□□□□□ -1.68
VRK1-202ENST00000553683 TSPEARQ8WU66 669 aa4.55□□□□□ -1.68
VRK1-202ENST00000553683 ZNF480Q8WV37 535 aa4.55□□□□□ -1.68
VRK1-202ENST00000553683 BCO1Q9HAY6 547 aa4.55□□□□□ -1.68
VRK1-202ENST00000553683 VTA1Q9NP79 307 aa4.55□□□□□ -1.68
VRK1-202ENST00000553683 ZNF277Q9NRM2 450 aaPredicted RBP4.55□□□□□ -1.68
VRK1-202ENST00000553683 RBM12Q9NTZ6 932 aaKnown RBP4.55□□□□□ -1.68
VRK1-202ENST00000553683 XDHP47989 1333 aa4.54□□□□□ -1.68
VRK1-202ENST00000553683 PLSCR1O15162 318 aa4.54□□□□□ -1.68
VRK1-202ENST00000553683 CDK11BP21127 795 aaKnown RBP4.54□□□□□ -1.68
VRK1-202ENST00000553683 TACR2P21452 398 aa4.54□□□□□ -1.68
VRK1-202ENST00000553683 AMPD3Q01432 767 aa4.54□□□□□ -1.68
VRK1-202ENST00000553683 CNGB1Q14028 1251 aaPredicted RBP4.54□□□□□ -1.68
VRK1-202ENST00000553683 NRN1LQ496H8 165 aa4.54□□□□□ -1.68
VRK1-202ENST00000553683 MBNL2Q5VZF2 373 aaKnown RBP4.54□□□□□ -1.68
VRK1-202ENST00000553683 GPRIN1Q7Z2K8 1008 aa4.54□□□□□ -1.68
VRK1-202ENST00000553683 CDC5LQ99459 802 aaKnown RBP4.54□□□□□ -1.68
VRK1-202ENST00000553683 ZNF747Q9BV97 191 aa4.54□□□□□ -1.68
VRK1-202ENST00000553683 ACE2Q9BYF1 805 aaPredicted RBP4.54□□□□□ -1.68
VRK1-202ENST00000553683 CCM2LQ9NUG4 571 aaPredicted RBP4.54□□□□□ -1.68
VRK1-202ENST00000553683 GPRC5DQ9NZD1 345 aa4.54□□□□□ -1.68
VRK1-202ENST00000553683 NCDNQ9UBB6 729 aa4.54□□□□□ -1.68
VRK1-202ENST00000553683 ZBTB21Q9ULJ3 1066 aa4.54□□□□□ -1.68
VRK1-202ENST00000553683 SPEF1Q9Y4P9 236 aa4.54□□□□□ -1.68
VRK1-202ENST00000553683 KLRG2A4D1S0 409 aaPredicted RBP4.53□□□□□ -1.68
VRK1-202ENST00000553683 PJA2O43164 708 aa4.53□□□□□ -1.68
VRK1-202ENST00000553683 PRAMEF4O60810 478 aa4.53□□□□□ -1.68
VRK1-202ENST00000553683 FZD7O75084 574 aa4.53□□□□□ -1.68
VRK1-202ENST00000553683 ITGA10O75578 1167 aa4.53□□□□□ -1.68
VRK1-202ENST00000553683 MGAT1P26572 445 aa4.53□□□□□ -1.68
VRK1-202ENST00000553683 CASRP41180 1078 aa4.53□□□□□ -1.68
VRK1-202ENST00000553683 WASP42768 502 aa4.53□□□□□ -1.68
VRK1-202ENST00000553683 ZXDAP98168 799 aa4.53□□□□□ -1.68
VRK1-202ENST00000553683 APBA1Q02410 837 aa4.53□□□□□ -1.68
VRK1-202ENST00000553683 CRHR2Q13324 411 aa4.53□□□□□ -1.68
VRK1-202ENST00000553683 ABHD15Q6UXT9 468 aa4.53□□□□□ -1.68
VRK1-202ENST00000553683 USP51Q70EK9 711 aa4.53□□□□□ -1.68
VRK1-202ENST00000553683 AMOTL1Q8IY63 956 aa4.53□□□□□ -1.68
VRK1-202ENST00000553683 LILRA3Q8N6C8 439 aaPredicted RBP4.53□□□□□ -1.68
VRK1-202ENST00000553683 CNTD1Q8N815 330 aa4.53□□□□□ -1.68
VRK1-202ENST00000553683 OR7D4Q8NG98 312 aa4.53□□□□□ -1.68
VRK1-202ENST00000553683 OR52N2Q8NGI0 321 aa4.53□□□□□ -1.68
VRK1-202ENST00000553683 CACTINQ8WUQ7 758 aaKnown RBP4.53□□□□□ -1.68
VRK1-202ENST00000553683 EXTL1Q92935 676 aa4.53□□□□□ -1.68
VRK1-202ENST00000553683 CYFIP2Q96F07 1278 aa4.53□□□□□ -1.68
VRK1-202ENST00000553683 MNTQ99583 582 aa4.53□□□□□ -1.68
VRK1-202ENST00000553683 GPR87Q9BY21 358 aa4.53□□□□□ -1.68
VRK1-202ENST00000553683 FAM126AQ9BYI3 521 aaPredicted RBP4.53□□□□□ -1.68
VRK1-202ENST00000553683 KRTAP4-11Q9BYQ6 195 aa4.53□□□□□ -1.68
VRK1-202ENST00000553683 VPS11Q9H270 941 aa4.53□□□□□ -1.68
VRK1-202ENST00000553683 DNAJC28Q9NX36 388 aa4.53□□□□□ -1.68
VRK1-202ENST00000553683 FAM30AQ9NZY2 134 aa4.53□□□□□ -1.68
VRK1-202ENST00000553683 CEP72Q9P209 647 aa4.53□□□□□ -1.68
VRK1-202ENST00000553683 TRPS1Q9UHF7 1281 aa4.53□□□□□ -1.68
VRK1-202ENST00000553683 EDARQ9UNE0 448 aa4.53□□□□□ -1.68
VRK1-202ENST00000553683 GPR45Q9Y5Y3 372 aa4.53□□□□□ -1.68
VRK1-202ENST00000553683 FAM171A2A8MVW0 826 aa4.52□□□□□ -1.69
VRK1-202ENST00000553683 DIRC3C9JPN6 131 aa4.52□□□□□ -1.69
VRK1-202ENST00000553683 TRIM24O15164 1050 aa4.52□□□□□ -1.69
VRK1-202ENST00000553683 ENDOD1O94919 500 aa4.52□□□□□ -1.69
VRK1-202ENST00000553683 HSP90B1P14625 803 aaKnown RBP4.52□□□□□ -1.69
VRK1-202ENST00000553683 AGXTP21549 392 aa4.52□□□□□ -1.69
VRK1-202ENST00000553683 ECHS1P30084 290 aa4.52□□□□□ -1.69
VRK1-202ENST00000553683 MCAMP43121 646 aa4.52□□□□□ -1.69
VRK1-202ENST00000553683 FLT3LGP49771 235 aa4.52□□□□□ -1.69
VRK1-202ENST00000553683 SCNN1GP51170 649 aa4.52□□□□□ -1.69
VRK1-202ENST00000553683 PTH1RQ03431 593 aa4.52□□□□□ -1.69
VRK1-202ENST00000553683 MGAT2Q10469 447 aa4.52□□□□□ -1.69
VRK1-202ENST00000553683 SP140Q13342 867 aa4.52□□□□□ -1.69
VRK1-202ENST00000553683 FAM47AQ5JRC9 791 aa4.52□□□□□ -1.69
VRK1-202ENST00000553683 TOR2AQ5JU69 321 aa4.52□□□□□ -1.69
VRK1-202ENST00000553683 SYDE2Q5VT97 1194 aa4.52□□□□□ -1.69
VRK1-202ENST00000553683 C1QL3Q5VWW1 255 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms