RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 GCLCP48506 637 aaPredicted RBP4.36□□□□□ -1.71
RDH11-204ENST00000553578 PSMD7P51665 324 aa4.36□□□□□ -1.71
RDH11-204ENST00000553578 PPP2R5DQ14738 602 aa4.36□□□□□ -1.71
RDH11-204ENST00000553578 MYBPC3Q14896 1274 aa4.36□□□□□ -1.71
RDH11-204ENST00000553578 ANKRD1Q15327 319 aa4.36□□□□□ -1.71
RDH11-204ENST00000553578 MIER2Q8N344 545 aa4.36□□□□□ -1.71
RDH11-204ENST00000553578 ARHGAP18Q8N392 663 aa4.36□□□□□ -1.71
RDH11-204ENST00000553578 MYCT1Q8N699 235 aa4.36□□□□□ -1.71
RDH11-204ENST00000553578 ZSWIM2Q8NEG5 633 aa4.36□□□□□ -1.71
RDH11-204ENST00000553578 SYTL4Q96C24 671 aaPredicted RBP4.36□□□□□ -1.71
RDH11-204ENST00000553578 WNK4Q96J92 1243 aa4.36□□□□□ -1.71
RDH11-204ENST00000553578 MYD88Q99836 296 aa4.36□□□□□ -1.71
RDH11-204ENST00000553578 FAM167BQ9BTA0 163 aa4.36□□□□□ -1.71
RDH11-204ENST00000553578 TARS2Q9BW92 718 aaKnown RBP4.36□□□□□ -1.71
RDH11-204ENST00000553578 SYNCQ9H7C4 482 aa4.36□□□□□ -1.71
RDH11-204ENST00000553578 ATP6V0A4Q9HBG4 840 aa4.36□□□□□ -1.71
RDH11-204ENST00000553578 ORC3Q9UBD5 711 aaPredicted RBP4.36□□□□□ -1.71
RDH11-204ENST00000553578 DDX20Q9UHI6 824 aaKnown RBP4.36□□□□□ -1.71
RDH11-204ENST00000553578 SRPK3Q9UPE1 567 aa4.36□□□□□ -1.71
RDH11-204ENST00000553578 PCDHGC5Q9Y5F6 944 aa4.36□□□□□ -1.71
RDH11-204ENST00000553578 A8MV72 311 aaPredicted RBP4.36□□□□□ -1.71
RDH11-204ENST00000553578 H3BQF6 201 aa4.36□□□□□ -1.71
RDH11-204ENST00000553578 DDX3XO00571 662 aaKnown RBP eCLIP4.36□□□□□ -1.71
RDH11-204ENST00000553578 SASH3O75995 380 aa4.36□□□□□ -1.71
RDH11-204ENST00000553578 MAPTP10636 758 aaKnown RBP4.36□□□□□ -1.71
RDH11-204ENST00000553578 CCNFP41002 786 aa4.36□□□□□ -1.71
RDH11-204ENST00000553578 ITIH3Q06033 890 aa4.36□□□□□ -1.71
RDH11-204ENST00000553578 MYO1EQ12965 1108 aa4.36□□□□□ -1.71
RDH11-204ENST00000553578 ITPK1Q13572 414 aa4.36□□□□□ -1.71
RDH11-204ENST00000553578 DPY19L1Q2PZI1 675 aa4.36□□□□□ -1.71
RDH11-204ENST00000553578 DBX2Q6ZNG2 339 aa4.36□□□□□ -1.71
RDH11-204ENST00000553578 RAB44Q7Z6P3 723 aaPredicted RBP4.36□□□□□ -1.71
RDH11-204ENST00000553578 LUZP1Q86V48 1076 aa4.36□□□□□ -1.71
RDH11-204ENST00000553578 LRRTM3Q86VH5 581 aa4.36□□□□□ -1.71
RDH11-204ENST00000553578 ZNF295-AS1Q8N0V1 137 aa4.36□□□□□ -1.71
RDH11-204ENST00000553578 ZGPATQ8N5A5 531 aaKnown RBP4.36□□□□□ -1.71
RDH11-204ENST00000553578 CNTD1Q8N815 330 aa4.36□□□□□ -1.71
RDH11-204ENST00000553578 NEDD1Q8NHV4 660 aa4.36□□□□□ -1.71
RDH11-204ENST00000553578 AFAP1L1Q8TED9 768 aa4.36□□□□□ -1.71
RDH11-204ENST00000553578 USP6NLQ92738 828 aa4.36□□□□□ -1.71
RDH11-204ENST00000553578 ABTB1Q969K4 478 aaPredicted RBP4.36□□□□□ -1.71
RDH11-204ENST00000553578 NACC2Q96BF6 587 aa4.36□□□□□ -1.71
RDH11-204ENST00000553578 SUSD3Q96L08 255 aa4.36□□□□□ -1.71
RDH11-204ENST00000553578 CCDC138Q96M89 665 aa4.36□□□□□ -1.71
RDH11-204ENST00000553578 LACRTQ9GZZ8 138 aa4.36□□□□□ -1.71
RDH11-204ENST00000553578 NAT10Q9H0A0 1025 aaKnown RBP4.36□□□□□ -1.71
RDH11-204ENST00000553578 MYLK2Q9H1R3 596 aa4.36□□□□□ -1.71
RDH11-204ENST00000553578 BRD7Q9NPI1 651 aa4.36□□□□□ -1.71
RDH11-204ENST00000553578 CHST12Q9NRB3 414 aa4.36□□□□□ -1.71
RDH11-204ENST00000553578 ADAMTS1Q9UHI8 967 aa4.36□□□□□ -1.71
RDH11-204ENST00000553578 PALD1Q9ULE6 856 aa4.36□□□□□ -1.71
RDH11-204ENST00000553578 NDUFAB1O14561 156 aa4.36□□□□□ -1.71
RDH11-204ENST00000553578 COBLO75128 1261 aa4.36□□□□□ -1.71
RDH11-204ENST00000553578 RPS6KA5O75582 802 aa4.36□□□□□ -1.71
RDH11-204ENST00000553578 RPS6KA4O75676 772 aa4.36□□□□□ -1.71
RDH11-204ENST00000553578 HSPA1AP0DMV8 641 aaKnown RBP4.36□□□□□ -1.71
RDH11-204ENST00000553578 HSPA1BP0DMV9 641 aaKnown RBP4.36□□□□□ -1.71
RDH11-204ENST00000553578 DNM2P50570 870 aa4.36□□□□□ -1.71
RDH11-204ENST00000553578 DYNC1I2Q13409 638 aaKnown RBP4.36□□□□□ -1.71
RDH11-204ENST00000553578 MTMR1Q13613 665 aa4.36□□□□□ -1.71
RDH11-204ENST00000553578 CCDC40Q4G0X9 1142 aa4.36□□□□□ -1.71
RDH11-204ENST00000553578 CCDC38Q502W7 563 aa4.36□□□□□ -1.71
RDH11-204ENST00000553578 RNFT1Q5M7Z0 435 aa4.36□□□□□ -1.71
RDH11-204ENST00000553578 SAMD5Q5TGI4 173 aa4.36□□□□□ -1.71
RDH11-204ENST00000553578 LMNTD2Q8IXW0 634 aa4.36□□□□□ -1.71
RDH11-204ENST00000553578 TAB3Q8N5C8 712 aaPredicted RBP4.36□□□□□ -1.71
RDH11-204ENST00000553578 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.36□□□□□ -1.71
RDH11-204ENST00000553578 ATP6V0A1Q93050 837 aa4.36□□□□□ -1.71
RDH11-204ENST00000553578 ZNF274Q96GC6 653 aaPredicted RBP4.36□□□□□ -1.71
RDH11-204ENST00000553578 GBP3Q9H0R5 595 aa4.36□□□□□ -1.71
RDH11-204ENST00000553578 FAM204AQ9H8W3 233 aa4.36□□□□□ -1.71
RDH11-204ENST00000553578 CERS4Q9HA82 394 aa4.36□□□□□ -1.71
RDH11-204ENST00000553578 SLC39A2Q9NP94 309 aa4.36□□□□□ -1.71
RDH11-204ENST00000553578 SLAMF7Q9NQ25 335 aa4.36□□□□□ -1.71
RDH11-204ENST00000553578 TMEM39AQ9NV64 488 aa4.36□□□□□ -1.71
RDH11-204ENST00000553578 ZFATQ9P243 1243 aa4.36□□□□□ -1.71
RDH11-204ENST00000553578 NARFQ9UHQ1 456 aa4.36□□□□□ -1.71
RDH11-204ENST00000553578 CARD8Q9Y2G2 431 aa4.36□□□□□ -1.71
RDH11-204ENST00000553578 SAMM50Q9Y512 469 aa4.36□□□□□ -1.71
RDH11-204ENST00000553578 LOC102724428A0A0B4J2F2 783 aa4.35□□□□□ -1.71
RDH11-204ENST00000553578 LRRD1A4D1F6 860 aa4.35□□□□□ -1.71
RDH11-204ENST00000553578 SNX2O60749 519 aa4.35□□□□□ -1.71
RDH11-204ENST00000553578 GFPT2O94808 682 aa4.35□□□□□ -1.71
RDH11-204ENST00000553578 PDE8BO95263 885 aa4.35□□□□□ -1.71
RDH11-204ENST00000553578 MAP3K6O95382 1288 aa4.35□□□□□ -1.71
RDH11-204ENST00000553578 PDHBP11177 359 aa4.35□□□□□ -1.71
RDH11-204ENST00000553578 CD33P20138 364 aa4.35□□□□□ -1.71
RDH11-204ENST00000553578 MCM3P25205 808 aa4.35□□□□□ -1.71
RDH11-204ENST00000553578 SIK1P57059 783 aa4.35□□□□□ -1.71
RDH11-204ENST00000553578 GUCY1A3Q02108 690 aa4.35□□□□□ -1.71
RDH11-204ENST00000553578 TOB2Q14106 344 aaPredicted RBP4.35□□□□□ -1.71
RDH11-204ENST00000553578 DDR2Q16832 855 aa4.35□□□□□ -1.71
RDH11-204ENST00000553578 MCMDC2Q4G0Z9 681 aa4.35□□□□□ -1.71
RDH11-204ENST00000553578 ZSCAN25Q6NSZ9 544 aa4.35□□□□□ -1.71
RDH11-204ENST00000553578 ZC3H7AQ8IWR0 971 aaKnown RBP4.35□□□□□ -1.71
RDH11-204ENST00000553578 ERMNQ8TAM6 284 aa4.35□□□□□ -1.71
RDH11-204ENST00000553578 ACSF2Q96CM8 615 aaPredicted RBP4.35□□□□□ -1.71
RDH11-204ENST00000553578 EPSTI1Q96J88 318 aa4.35□□□□□ -1.71
RDH11-204ENST00000553578 MAGEB10Q96LZ2 347 aaPredicted RBP4.35□□□□□ -1.71
RDH11-204ENST00000553578 MAK16Q9BXY0 300 aaKnown RBP4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms