RNA–Protein interactions for RNA: ENST00000553570.5

ATXN3-222, Transcript of ataxin 3, human

TSL 1 (best)

Gene ATXN3, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-222	ENST00000553570	MSC	O60682	206 aa		5.7	□□□□□ -1.5
ATXN3-222	ENST00000553570	EFCAB14	O75071	495 aa		5.7	□□□□□ -1.5
ATXN3-222	ENST00000553570	VIL1	P09327	827 aa	Known RBP	5.7	□□□□□ -1.5
ATXN3-222	ENST00000553570	MYCLP1	P12525	358 aa	Predicted RBP	5.7	□□□□□ -1.5
ATXN3-222	ENST00000553570	LCP1	P13796	627 aa		5.7	□□□□□ -1.5
ATXN3-222	ENST00000553570	TACR1	P25103	407 aa		5.7	□□□□□ -1.5
ATXN3-222	ENST00000553570	IL15	P40933	162 aa	Predicted RBP	5.7	□□□□□ -1.5
ATXN3-222	ENST00000553570	RFX5	P48382	616 aa	Predicted RBP	5.7	□□□□□ -1.5
ATXN3-222	ENST00000553570	IRX6	P78412	446 aa	Predicted RBP	5.7	□□□□□ -1.5
ATXN3-222	ENST00000553570	HTRA3	P83110	453 aa		5.7	□□□□□ -1.5
ATXN3-222	ENST00000553570	TMEM62	Q0P6H9	643 aa		5.7	□□□□□ -1.5
ATXN3-222	ENST00000553570	GRM1	Q13255	1194 aa		5.7	□□□□□ -1.5
ATXN3-222	ENST00000553570	MVP	Q14764	893 aa	Known RBP	5.7	□□□□□ -1.5
ATXN3-222	ENST00000553570	ATP2B3	Q16720	1220 aa		5.7	□□□□□ -1.5
ATXN3-222	ENST00000553570	RABL6	Q3YEC7	729 aa	Predicted RBP	5.7	□□□□□ -1.5
ATXN3-222	ENST00000553570	E4F1	Q66K89	784 aa	Predicted RBP	5.7	□□□□□ -1.5
ATXN3-222	ENST00000553570	OLFML2B	Q68BL8	750 aa		5.7	□□□□□ -1.5
ATXN3-222	ENST00000553570	THNSL2	Q86YJ6	484 aa		5.7	□□□□□ -1.5
ATXN3-222	ENST00000553570	CNTROB	Q8N137	903 aa		5.7	□□□□□ -1.5
ATXN3-222	ENST00000553570	DPF3	Q92784	378 aa		5.7	□□□□□ -1.5
ATXN3-222	ENST00000553570	DACT3	Q96B18	629 aa	Predicted RBP	5.7	□□□□□ -1.5
ATXN3-222	ENST00000553570	DCPS	Q96C86	337 aa	Known RBP	5.7	□□□□□ -1.5
ATXN3-222	ENST00000553570	FAM84B	Q96KN1	310 aa	Predicted RBP	5.7	□□□□□ -1.5
ATXN3-222	ENST00000553570	PHF20	Q9BVI0	1012 aa		5.7	□□□□□ -1.5
ATXN3-222	ENST00000553570	IRF2BPL	Q9H1B7	796 aa		5.7	□□□□□ -1.5
ATXN3-222	ENST00000553570	TMX1	Q9H3N1	280 aa		5.7	□□□□□ -1.5
ATXN3-222	ENST00000553570	ADARB2	Q9NS39	739 aa	Known RBP	5.7	□□□□□ -1.5
ATXN3-222	ENST00000553570	GNL3L	Q9NVN8	582 aa	Known RBP	5.7	□□□□□ -1.5
ATXN3-222	ENST00000553570	HDAC9	Q9UKV0	1011 aa		5.7	□□□□□ -1.5
ATXN3-222	ENST00000553570	CNOT6	Q9ULM6	557 aa	Known RBP	5.7	□□□□□ -1.5
ATXN3-222	ENST00000553570	SCAF8	Q9UPN6	1271 aa	Known RBP	5.7	□□□□□ -1.5
ATXN3-222	ENST00000553570	COL4A3BP	Q9Y5P4	624 aa		5.7	□□□□□ -1.5
ATXN3-222	ENST00000553570	MYH7	P12883	1935 aa		5.7	□□□□□ -1.5
ATXN3-222	ENST00000553570	MED23	Q9ULK4	1368 aa		5.69	□□□□□ -1.5
ATXN3-222	ENST00000553570	HMMR	O75330	724 aa		5.69	□□□□□ -1.5
ATXN3-222	ENST00000553570	RASGRP1	O95267	797 aa		5.69	□□□□□ -1.5
ATXN3-222	ENST00000553570	CRTAM	O95727	393 aa		5.69	□□□□□ -1.5
ATXN3-222	ENST00000553570	PI3	P19957	117 aa		5.69	□□□□□ -1.5
ATXN3-222	ENST00000553570	LTBR	P36941	435 aa		5.69	□□□□□ -1.5
ATXN3-222	ENST00000553570	FSTL1	Q12841	308 aa		5.69	□□□□□ -1.5
ATXN3-222	ENST00000553570	PUM3	Q15397	648 aa	Known RBP	5.69	□□□□□ -1.5
ATXN3-222	ENST00000553570	INF2	Q27J81	1249 aa		5.69	□□□□□ -1.5
ATXN3-222	ENST00000553570	STRIP1	Q5VSL9	837 aa		5.69	□□□□□ -1.5
ATXN3-222	ENST00000553570	BICRAL	Q6AI39	1079 aa		5.69	□□□□□ -1.5
ATXN3-222	ENST00000553570	IQCE	Q6IPM2	695 aa		5.69	□□□□□ -1.5
ATXN3-222	ENST00000553570	ZC3H14	Q6PJT7	736 aa	Known RBP	5.69	□□□□□ -1.5
ATXN3-222	ENST00000553570	RSPO2	Q6UXX9	243 aa	Predicted RBP	5.69	□□□□□ -1.5
ATXN3-222	ENST00000553570	USP50	Q70EL3	339 aa	Predicted RBP	5.69	□□□□□ -1.5
ATXN3-222	ENST00000553570	ATG9A	Q7Z3C6	839 aa		5.69	□□□□□ -1.5
ATXN3-222	ENST00000553570	LRRTM3	Q86VH5	581 aa		5.69	□□□□□ -1.5
ATXN3-222	ENST00000553570	RCBTB1	Q8NDN9	531 aa		5.69	□□□□□ -1.5
ATXN3-222	ENST00000553570	PLEKHO2	Q8TD55	490 aa		5.69	□□□□□ -1.5
ATXN3-222	ENST00000553570	LPIN2	Q92539	896 aa		5.69	□□□□□ -1.5
ATXN3-222	ENST00000553570	DIO2	Q92813	273 aa		5.69	□□□□□ -1.5
ATXN3-222	ENST00000553570	TARS2	Q9BW92	718 aa	Known RBP	5.69	□□□□□ -1.5
ATXN3-222	ENST00000553570	CCDC8	Q9H0W5	538 aa	Predicted RBP	5.69	□□□□□ -1.5
ATXN3-222	ENST00000553570	GPR27	Q9NS67	375 aa		5.69	□□□□□ -1.5
ATXN3-222	ENST00000553570	INTS7	Q9NVH2	962 aa	Known RBP	5.69	□□□□□ -1.5
ATXN3-222	ENST00000553570	MAGEC2	Q9UBF1	373 aa	Predicted RBP	5.69	□□□□□ -1.5
ATXN3-222	ENST00000553570	GULP1	Q9UBP9	304 aa		5.69	□□□□□ -1.5
ATXN3-222	ENST00000553570	EXOC6B	Q9Y2D4	811 aa		5.69	□□□□□ -1.5
ATXN3-222	ENST00000553570	RWDD3	Q9Y3V2	267 aa		5.69	□□□□□ -1.5
ATXN3-222	ENST00000553570	TNPO3	Q9Y5L0	923 aa	Known RBP	5.69	□□□□□ -1.5
ATXN3-222	ENST00000553570	IRAK3	Q9Y616	596 aa		5.69	□□□□□ -1.5
ATXN3-222	ENST00000553570	ADAMTSL1	Q8N6G6	1762 aa		5.69	□□□□□ -1.5
ATXN3-222	ENST00000553570	UTRN	P46939	3433 aa		5.69	□□□□□ -1.5
ATXN3-222	ENST00000553570	ZNF646	O15015	1829 aa	Predicted RBP	5.69	□□□□□ -1.5
ATXN3-222	ENST00000553570	MYH1	P12882	1939 aa		5.68	□□□□□ -1.5
ATXN3-222	ENST00000553570	MYH8	P13535	1937 aa		5.68	□□□□□ -1.5
ATXN3-222	ENST00000553570	TRBV23OR9-2	A0A075B6M9	112 aa		5.68	□□□□□ -1.5
ATXN3-222	ENST00000553570	TCRBV16S1A1N1	A0A5B0	115 aa		5.68	□□□□□ -1.5
ATXN3-222	ENST00000553570	ZC3H12D	A2A288	527 aa	Known RBP	5.68	□□□□□ -1.5
ATXN3-222	ENST00000553570	GSG1L2	A8MUP6	293 aa		5.68	□□□□□ -1.5
ATXN3-222	ENST00000553570	TRAF5	O00463	557 aa		5.68	□□□□□ -1.5
ATXN3-222	ENST00000553570	AQP7	O14520	342 aa		5.68	□□□□□ -1.5
ATXN3-222	ENST00000553570	CIAO1	O76071	339 aa		5.68	□□□□□ -1.5
ATXN3-222	ENST00000553570	SASH1	O94885	1247 aa		5.68	□□□□□ -1.5
ATXN3-222	ENST00000553570	HSPA6	P17066	643 aa		5.68	□□□□□ -1.5
ATXN3-222	ENST00000553570	RPS12	P25398	132 aa	Known RBP	5.68	□□□□□ -1.5
ATXN3-222	ENST00000553570	ADORA1	P30542	326 aa		5.68	□□□□□ -1.5
ATXN3-222	ENST00000553570	NCKAP1L	P55160	1127 aa		5.68	□□□□□ -1.5
ATXN3-222	ENST00000553570	RRP1	P56182	461 aa	Known RBP	5.68	□□□□□ -1.5
ATXN3-222	ENST00000553570	GPR85	P60893	370 aa		5.68	□□□□□ -1.5
ATXN3-222	ENST00000553570	PRR5	P85299	388 aa		5.68	□□□□□ -1.5
ATXN3-222	ENST00000553570	ZNF200	P98182	395 aa	Predicted RBP	5.68	□□□□□ -1.5
ATXN3-222	ENST00000553570	AMPD3	Q01432	767 aa		5.68	□□□□□ -1.5
ATXN3-222	ENST00000553570	KCNAB2	Q13303	367 aa		5.68	□□□□□ -1.5
ATXN3-222	ENST00000553570	PRKG1	Q13976	671 aa		5.68	□□□□□ -1.5
ATXN3-222	ENST00000553570	DLGAP5	Q15398	846 aa		5.68	□□□□□ -1.5
ATXN3-222	ENST00000553570	ZNF385B	Q569K4	471 aa		5.68	□□□□□ -1.5
ATXN3-222	ENST00000553570	MFSD14B	Q5SR56	506 aa		5.68	□□□□□ -1.5
ATXN3-222	ENST00000553570	TTC39A	Q5SRH9	613 aa		5.68	□□□□□ -1.5
ATXN3-222	ENST00000553570	DLK2	Q6UY11	383 aa		5.68	□□□□□ -1.5
ATXN3-222	ENST00000553570	KRT26	Q7Z3Y9	468 aa		5.68	□□□□□ -1.5
ATXN3-222	ENST00000553570	FAM129C	Q86XR2	697 aa		5.68	□□□□□ -1.5
ATXN3-222	ENST00000553570	LZTR1	Q8N653	840 aa		5.68	□□□□□ -1.5
ATXN3-222	ENST00000553570	AGBL3	Q8NEM8	1001 aa		5.68	□□□□□ -1.5
ATXN3-222	ENST00000553570	DPF2	Q92785	391 aa		5.68	□□□□□ -1.5
ATXN3-222	ENST00000553570	MAGEB10	Q96LZ2	347 aa	Predicted RBP	5.68	□□□□□ -1.5
ATXN3-222	ENST00000553570	ZFYVE21	Q9BQ24	234 aa		5.68	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms