RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 PLA2G4BP0C869 781 aa26.04■■□□□ 1.76
TDP1-205ENST00000553527 KRT17Q04695 432 aa26.04■■□□□ 1.76
TDP1-205ENST00000553527 HYAL1Q12794 435 aa26.04■■□□□ 1.76
TDP1-205ENST00000553527 PRPF4BQ13523 1007 aaKnown RBP26.04■■□□□ 1.76
TDP1-205ENST00000553527 FOXD4L6Q3SYB3 417 aaPredicted RBP26.04■■□□□ 1.76
TDP1-205ENST00000553527 SLC27A1Q6PCB7 646 aa26.04■■□□□ 1.76
TDP1-205ENST00000553527 FOXD4L3Q6VB84 417 aaPredicted RBP26.04■■□□□ 1.76
TDP1-205ENST00000553527 C1orf186Q6ZWK4 172 aa26.04■■□□□ 1.76
TDP1-205ENST00000553527 ADGRD2Q7Z7M1 963 aa26.04■■□□□ 1.76
TDP1-205ENST00000553527 MRPS27Q92552 414 aaKnown RBP26.04■■□□□ 1.76
TDP1-205ENST00000553527 ZNF396Q96N95 335 aaPredicted RBP26.04■■□□□ 1.76
TDP1-205ENST00000553527 TLR9Q9NR96 1032 aa26.04■■□□□ 1.76
TDP1-205ENST00000553527 CIZ1Q9ULV3 898 aaPredicted RBP26.04■■□□□ 1.76
TDP1-205ENST00000553527 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP26.03■■□□□ 1.76
TDP1-205ENST00000553527 AKAP5P24588 427 aa26.03■■□□□ 1.76
TDP1-205ENST00000553527 LONP1P36776 959 aaKnown RBP26.03■■□□□ 1.76
TDP1-205ENST00000553527 UBE3AQ05086 875 aa26.03■■□□□ 1.76
TDP1-205ENST00000553527 KARSQ15046 597 aaKnown RBP26.03■■□□□ 1.76
TDP1-205ENST00000553527 PTPAQ15257 358 aa26.03■■□□□ 1.76
TDP1-205ENST00000553527 ZNF280BQ86YH2 543 aa26.03■■□□□ 1.76
TDP1-205ENST00000553527 SYT2Q8N9I0 419 aaPredicted RBP26.03■■□□□ 1.76
TDP1-205ENST00000553527 PRIMPOLQ96LW4 560 aa26.03■■□□□ 1.76
TDP1-205ENST00000553527 FAM193BQ96PV7 902 aaPredicted RBP26.03■■□□□ 1.76
TDP1-205ENST00000553527 NXF3Q9H4D5 531 aaKnown RBP26.03■■□□□ 1.76
TDP1-205ENST00000553527 DNAJB4Q9UDY4 337 aa26.03■■□□□ 1.76
TDP1-205ENST00000553527 TCHHQ07283 1943 aa26.02■■□□□ 1.76
TDP1-205ENST00000553527 H3BQ06 376 aaPredicted RBP26.02■■□□□ 1.76
TDP1-205ENST00000553527 PPM1AP35813 382 aa26.02■■□□□ 1.76
TDP1-205ENST00000553527 PLCB3Q01970 1234 aa26.02■■□□□ 1.76
TDP1-205ENST00000553527 TMEM119Q4V9L6 283 aa26.02■■□□□ 1.76
TDP1-205ENST00000553527 PPP4R3CPQ6ZMV5 832 aa26.02■■□□□ 1.76
TDP1-205ENST00000553527 DAW1Q8N136 415 aa26.02■■□□□ 1.76
TDP1-205ENST00000553527 SLC39A11Q8N1S5 342 aa26.02■■□□□ 1.76
TDP1-205ENST00000553527 PPP2R3CQ969Q6 453 aa26.02■■□□□ 1.76
TDP1-205ENST00000553527 PABPC5Q96DU9 382 aaKnown RBP26.02■■□□□ 1.76
TDP1-205ENST00000553527 DRC1Q96MC2 740 aa26.02■■□□□ 1.76
TDP1-205ENST00000553527 USP28Q96RU2 1077 aa26.02■■□□□ 1.76
TDP1-205ENST00000553527 GAD1Q99259 594 aa26.02■■□□□ 1.76
TDP1-205ENST00000553527 UBN1Q9NPG3 1134 aa26.02■■□□□ 1.76
TDP1-205ENST00000553527 PARP2Q9UGN5 583 aa26.02■■□□□ 1.76
TDP1-205ENST00000553527 ATP6V1DQ9Y5K8 247 aa26.02■■□□□ 1.76
TDP1-205ENST00000553527 CNTNAP2Q9UHC6 1331 aa26.02■■□□□ 1.76
TDP1-205ENST00000553527 NPHP3-ACAD11A0A0J9YXS1 232 aa26.01■■□□□ 1.75
TDP1-205ENST00000553527 K7ERI5 159 aa26.01■■□□□ 1.75
TDP1-205ENST00000553527 ACKR2O00590 384 aa26.01■■□□□ 1.75
TDP1-205ENST00000553527 PER2O15055 1255 aa26.01■■□□□ 1.75
TDP1-205ENST00000553527 DDHD2O94830 711 aa26.01■■□□□ 1.75
TDP1-205ENST00000553527 BMP1P13497 986 aa26.01■■□□□ 1.75
TDP1-205ENST00000553527 CA8P35219 290 aa26.01■■□□□ 1.75
TDP1-205ENST00000553527 MLH1P40692 756 aa26.01■■□□□ 1.75
TDP1-205ENST00000553527 NPTX2P47972 431 aa26.01■■□□□ 1.75
TDP1-205ENST00000553527 NRIP1P48552 1158 aa26.01■■□□□ 1.75
TDP1-205ENST00000553527 SLC12A3P55017 1021 aa26.01■■□□□ 1.75
TDP1-205ENST00000553527 CACNB1Q02641 598 aaPredicted RBP26.01■■□□□ 1.75
TDP1-205ENST00000553527 DMP1Q13316 513 aaPredicted RBP26.01■■□□□ 1.75
TDP1-205ENST00000553527 FAM187BQ17R55 369 aa26.01■■□□□ 1.75
TDP1-205ENST00000553527 PLPP4Q5VZY2 271 aa26.01■■□□□ 1.75
TDP1-205ENST00000553527 HACE1Q8IYU2 909 aa26.01■■□□□ 1.75
TDP1-205ENST00000553527 ZFP42Q96MM3 310 aa26.01■■□□□ 1.75
TDP1-205ENST00000553527 CLIC6Q96NY7 704 aa26.01■■□□□ 1.75
TDP1-205ENST00000553527 TCF25Q9BQ70 676 aa26.01■■□□□ 1.75
TDP1-205ENST00000553527 CCDC113Q9H0I3 377 aa26.01■■□□□ 1.75
TDP1-205ENST00000553527 ENTPD7Q9NQZ7 604 aa26.01■■□□□ 1.75
TDP1-205ENST00000553527 KLK14Q9P0G3 267 aa26.01■■□□□ 1.75
TDP1-205ENST00000553527 KANSL3Q9P2N6 904 aa26.01■■□□□ 1.75
TDP1-205ENST00000553527 ARL5CA6NH57 179 aa26■■□□□ 1.75
TDP1-205ENST00000553527 N4BP3O15049 544 aa26■■□□□ 1.75
TDP1-205ENST00000553527 LINC01565O15544 149 aa26■■□□□ 1.75
TDP1-205ENST00000553527 EDN1P05305 212 aa26■■□□□ 1.75
TDP1-205ENST00000553527 GALTP07902 379 aa26■■□□□ 1.75
TDP1-205ENST00000553527 EFNA5P52803 228 aa26■■□□□ 1.75
TDP1-205ENST00000553527 TMC7Q7Z402 723 aa26■■□□□ 1.75
TDP1-205ENST00000553527 ADAMTS19Q8TE59 1207 aa26■■□□□ 1.75
TDP1-205ENST00000553527 RSPH1Q8WYR4 309 aa26■■□□□ 1.75
TDP1-205ENST00000553527 TMEM169Q96HH4 297 aa26■■□□□ 1.75
TDP1-205ENST00000553527 EPSTI1Q96J88 318 aa26■■□□□ 1.75
TDP1-205ENST00000553527 PDZD7Q9H5P4 517 aa26■■□□□ 1.75
TDP1-205ENST00000553527 TLE6Q9H808 572 aa26■■□□□ 1.75
TDP1-205ENST00000553527 KMT5AQ9NQR1 393 aa26■■□□□ 1.75
TDP1-205ENST00000553527 MIOSQ9NXC5 875 aa26■■□□□ 1.75
TDP1-205ENST00000553527 B4GALT3O60512 393 aa25.99■■□□□ 1.75
TDP1-205ENST00000553527 PLCG1P19174 1290 aa25.99■■□□□ 1.75
TDP1-205ENST00000553527 SLC11A1P49279 550 aa25.99■■□□□ 1.75
TDP1-205ENST00000553527 MAPK7Q13164 816 aa25.99■■□□□ 1.75
TDP1-205ENST00000553527 USP49Q70CQ1 688 aa25.99■■□□□ 1.75
TDP1-205ENST00000553527 TMEM173Q86WV6 379 aaPredicted RBP25.99■■□□□ 1.75
TDP1-205ENST00000553527 KCTD17Q8N5Z5 321 aa25.99■■□□□ 1.75
TDP1-205ENST00000553527 NECAB3Q96P71 396 aaPredicted RBP25.99■■□□□ 1.75
TDP1-205ENST00000553527 TFIP11Q9UBB9 837 aaKnown RBP25.99■■□□□ 1.75
TDP1-205ENST00000553527 FBXO2Q9UK22 296 aaPredicted RBP25.99■■□□□ 1.75
TDP1-205ENST00000553527 LZTS1Q9Y250 596 aa25.99■■□□□ 1.75
TDP1-205ENST00000553527 SLC16A4O15374 487 aa25.98■■□□□ 1.75
TDP1-205ENST00000553527 NCK2O43639 380 aa25.98■■□□□ 1.75
TDP1-205ENST00000553527 ALDH2P05091 517 aa25.98■■□□□ 1.75
TDP1-205ENST00000553527 GUCY2CP25092 1073 aa25.98■■□□□ 1.75
TDP1-205ENST00000553527 SCNN1GP51170 649 aa25.98■■□□□ 1.75
TDP1-205ENST00000553527 MCM6Q14566 821 aa25.98■■□□□ 1.75
TDP1-205ENST00000553527 CLUL1Q15846 466 aa25.98■■□□□ 1.75
TDP1-205ENST00000553527 NT5DC1Q5TFE4 455 aa25.98■■□□□ 1.75
TDP1-205ENST00000553527 ATL3Q6DD88 541 aa25.98■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms