RNA–Protein interactions for RNA: ENST00000552973.1

NEK3-204, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-204ENST00000552973 DZANK1Q9NVP4 752 aa12.78□□□□□ -0.36
NEK3-204ENST00000552973 KANSL3Q9P2N6 904 aa12.78□□□□□ -0.36
NEK3-204ENST00000552973 F8W810 466 aa12.77□□□□□ -0.37
NEK3-204ENST00000552973 GAS2O43903 313 aaKnown RBP12.77□□□□□ -0.37
NEK3-204ENST00000552973 MLH1P40692 756 aa12.77□□□□□ -0.37
NEK3-204ENST00000552973 SCNN1GP51170 649 aa12.77□□□□□ -0.37
NEK3-204ENST00000552973 PTPN5P54829 565 aa12.77□□□□□ -0.37
NEK3-204ENST00000552973 ANAPC15P60006 121 aa12.77□□□□□ -0.37
NEK3-204ENST00000552973 CAPSQ13938 189 aa12.77□□□□□ -0.37
NEK3-204ENST00000552973 KIAA1841Q6NSI8 718 aa12.77□□□□□ -0.37
NEK3-204ENST00000552973 PPFIBP1Q86W92 1011 aa12.77□□□□□ -0.37
NEK3-204ENST00000552973 DIS3L2Q8IYB7 885 aaKnown RBP12.77□□□□□ -0.37
NEK3-204ENST00000552973 TDRD5Q8NAT2 981 aaKnown RBP12.77□□□□□ -0.37
NEK3-204ENST00000552973 GTF3C6Q969F1 213 aa12.77□□□□□ -0.37
NEK3-204ENST00000552973 ZFP42Q96MM3 310 aa12.77□□□□□ -0.37
NEK3-204ENST00000552973 HSD17B14Q9BPX1 270 aa12.77□□□□□ -0.37
NEK3-204ENST00000552973 MRPL17Q9NRX2 175 aaKnown RBP12.77□□□□□ -0.37
NEK3-204ENST00000552973 FAM86C1Q9NVL1 165 aa12.77□□□□□ -0.37
NEK3-204ENST00000552973 MARCH5Q9NX47 278 aa12.77□□□□□ -0.37
NEK3-204ENST00000552973 SORCS3Q9UPU3 1222 aa12.77□□□□□ -0.37
NEK3-204ENST00000552973 CNTNAP2Q9UHC6 1331 aa12.77□□□□□ -0.37
NEK3-204ENST00000552973 TECTAO75443 2155 aa12.76□□□□□ -0.37
NEK3-204ENST00000552973 CARNS1A5YM72 827 aa12.76□□□□□ -0.37
NEK3-204ENST00000552973 ARL5CA6NH57 179 aa12.76□□□□□ -0.37
NEK3-204ENST00000552973 B4GALT5O43286 388 aa12.76□□□□□ -0.37
NEK3-204ENST00000552973 LILRB3O75022 631 aa12.76□□□□□ -0.37
NEK3-204ENST00000552973 DGAT1O75907 488 aa12.76□□□□□ -0.37
NEK3-204ENST00000552973 GLRA2P23416 452 aa12.76□□□□□ -0.37
NEK3-204ENST00000552973 AKAP5P24588 427 aa12.76□□□□□ -0.37
NEK3-204ENST00000552973 ARL2P36404 184 aa12.76□□□□□ -0.37
NEK3-204ENST00000552973 CLCN4P51793 760 aa12.76□□□□□ -0.37
NEK3-204ENST00000552973 NEK4P51957 841 aa12.76□□□□□ -0.37
NEK3-204ENST00000552973 GUCY1B3Q02153 619 aa12.76□□□□□ -0.37
NEK3-204ENST00000552973 MBTD1Q05BQ5 628 aa12.76□□□□□ -0.37
NEK3-204ENST00000552973 NCBP1Q09161 790 aaKnown RBP12.76□□□□□ -0.37
NEK3-204ENST00000552973 MTMR3Q13615 1198 aa12.76□□□□□ -0.37
NEK3-204ENST00000552973 TRIM29Q14134 588 aa12.76□□□□□ -0.37
NEK3-204ENST00000552973 TFDP1Q14186 410 aa12.76□□□□□ -0.37
NEK3-204ENST00000552973 MXD4Q14582 209 aaPredicted RBP12.76□□□□□ -0.37
NEK3-204ENST00000552973 NOTUMQ6P988 496 aa12.76□□□□□ -0.37
NEK3-204ENST00000552973 GPR149Q86SP6 731 aa12.76□□□□□ -0.37
NEK3-204ENST00000552973 COLGALT2Q8IYK4 626 aa12.76□□□□□ -0.37
NEK3-204ENST00000552973 CNNM3Q8NE01 707 aa12.76□□□□□ -0.37
NEK3-204ENST00000552973 RABGGTAQ92696 567 aa12.76□□□□□ -0.37
NEK3-204ENST00000552973 CCDC43Q96MW1 224 aaKnown RBP12.76□□□□□ -0.37
NEK3-204ENST00000552973 CSRNP2Q9H175 543 aa12.76□□□□□ -0.37
NEK3-204ENST00000552973 TMEM60Q9H2L4 133 aa12.76□□□□□ -0.37
NEK3-204ENST00000552973 GPRC5CQ9NQ84 441 aa12.76□□□□□ -0.37
NEK3-204ENST00000552973 ANKEF1Q9NU02 776 aa12.76□□□□□ -0.37
NEK3-204ENST00000552973 KLK14Q9P0G3 267 aa12.76□□□□□ -0.37
NEK3-204ENST00000552973 POTEMA6NI47 508 aa12.75□□□□□ -0.37
NEK3-204ENST00000552973 NEMFO60524 1076 aa12.75□□□□□ -0.37
NEK3-204ENST00000552973 USO1O60763 962 aaKnown RBP12.75□□□□□ -0.37
NEK3-204ENST00000552973 LYPLA2O95372 231 aa12.75□□□□□ -0.37
NEK3-204ENST00000552973 NPTXRO95502 500 aa12.75□□□□□ -0.37
NEK3-204ENST00000552973 SOD2P04179 222 aa12.75□□□□□ -0.37
NEK3-204ENST00000552973 URODP06132 367 aa12.75□□□□□ -0.37
NEK3-204ENST00000552973 ARF4P18085 180 aaPredicted RBP12.75□□□□□ -0.37
NEK3-204ENST00000552973 AXLP30530 894 aa12.75□□□□□ -0.37
NEK3-204ENST00000552973 RARRES1P49788 294 aa12.75□□□□□ -0.37
NEK3-204ENST00000552973 ST3GAL1Q11201 340 aa12.75□□□□□ -0.37
NEK3-204ENST00000552973 AMHR2Q16671 573 aa12.75□□□□□ -0.37
NEK3-204ENST00000552973 B3GALT6Q96L58 329 aa12.75□□□□□ -0.37
NEK3-204ENST00000552973 MTMR9Q96QG7 549 aa12.75□□□□□ -0.37
NEK3-204ENST00000552973 HERC2P3Q9BVR0 1158 aa12.75□□□□□ -0.37
NEK3-204ENST00000552973 TRIM6Q9C030 488 aaPredicted RBP12.75□□□□□ -0.37
NEK3-204ENST00000552973 POLR3FQ9H1D9 316 aaPredicted RBP12.75□□□□□ -0.37
NEK3-204ENST00000552973 NXF3Q9H4D5 531 aaKnown RBP12.75□□□□□ -0.37
NEK3-204ENST00000552973 C5orf42Q9H799 3197 aa12.75□□□□□ -0.37
NEK3-204ENST00000552973 SFXN1Q9H9B4 322 aa12.75□□□□□ -0.37
NEK3-204ENST00000552973 UBN1Q9NPG3 1134 aa12.75□□□□□ -0.37
NEK3-204ENST00000552973 H0Y858 1186 aa12.74□□□□□ -0.37
NEK3-204ENST00000552973 TEX28O15482 410 aa12.74□□□□□ -0.37
NEK3-204ENST00000552973 SPATA31D3P0C874 917 aa12.74□□□□□ -0.37
NEK3-204ENST00000552973 MCM7P33993 719 aa12.74□□□□□ -0.37
NEK3-204ENST00000552973 SPATA31D4Q6ZUB0 917 aa12.74□□□□□ -0.37
NEK3-204ENST00000552973 CCDC149Q6ZUS6 474 aa12.74□□□□□ -0.37
NEK3-204ENST00000552973 IFNLR1Q8IU57 520 aaPredicted RBP12.74□□□□□ -0.37
NEK3-204ENST00000552973 UBALD2Q8IYN6 164 aa12.74□□□□□ -0.37
NEK3-204ENST00000552973 ZDHHC14Q8IZN3 488 aa12.74□□□□□ -0.37
NEK3-204ENST00000552973 PLCD3Q8N3E9 789 aa12.74□□□□□ -0.37
NEK3-204ENST00000552973 ATOH1Q92858 354 aaPredicted RBP12.74□□□□□ -0.37
NEK3-204ENST00000552973 CCDC51Q96ER9 411 aa12.74□□□□□ -0.37
NEK3-204ENST00000552973 RPS6KC1Q96S38 1066 aa12.74□□□□□ -0.37
NEK3-204ENST00000552973 PRRX2Q99811 253 aa12.74□□□□□ -0.37
NEK3-204ENST00000552973 MAN1C1Q9NR34 630 aa12.74□□□□□ -0.37
NEK3-204ENST00000552973 CACNG4Q9UBN1 327 aa12.74□□□□□ -0.37
NEK3-204ENST00000552973 PARP2Q9UGN5 583 aa12.74□□□□□ -0.37
NEK3-204ENST00000552973 USTQ9Y2C2 406 aa12.74□□□□□ -0.37
NEK3-204ENST00000552973 CCDC195A0A1B0GUA6 201 aa12.73□□□□□ -0.37
NEK3-204ENST00000552973 LRRIQ4A6NIV6 560 aa12.73□□□□□ -0.37
NEK3-204ENST00000552973 MED24O75448 989 aa12.73□□□□□ -0.37
NEK3-204ENST00000552973 SEC24BO95487 1268 aa12.73□□□□□ -0.37
NEK3-204ENST00000552973 SPATA31C1P0DKV0 1188 aa12.73□□□□□ -0.37
NEK3-204ENST00000552973 GLUD2P49448 558 aa12.73□□□□□ -0.37
NEK3-204ENST00000552973 DSC1Q08554 894 aa12.73□□□□□ -0.37
NEK3-204ENST00000552973 ZNF174Q15697 407 aa12.73□□□□□ -0.37
NEK3-204ENST00000552973 KIAA0319Q5VV43 1072 aa12.73□□□□□ -0.37
NEK3-204ENST00000552973 CATSPER3Q86XQ3 398 aa12.73□□□□□ -0.37
NEK3-204ENST00000552973 PALB2Q86YC2 1186 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms