RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 SPOUT1Q5T280 376 aaKnown RBP11.27□□□□□ -0.61
TRAFD1-208ENST00000552890 ELOA2Q8IYF1 753 aaPredicted RBP11.27□□□□□ -0.61
TRAFD1-208ENST00000552890 DEFB123Q8N688 67 aa11.27□□□□□ -0.61
TRAFD1-208ENST00000552890 TMEM161BQ8NDZ6 487 aa11.27□□□□□ -0.61
TRAFD1-208ENST00000552890 GOLGA5Q8TBA6 731 aa11.27□□□□□ -0.61
TRAFD1-208ENST00000552890 DHX58Q96C10 678 aa11.27□□□□□ -0.61
TRAFD1-208ENST00000552890 ZNF689Q96CS4 500 aaPredicted RBP11.27□□□□□ -0.61
TRAFD1-208ENST00000552890 ACCSQ96QU6 501 aa11.27□□□□□ -0.61
TRAFD1-208ENST00000552890 RPS6KC1Q96S38 1066 aa11.27□□□□□ -0.61
TRAFD1-208ENST00000552890 CCDC94Q9BW85 323 aaPredicted RBP11.27□□□□□ -0.61
TRAFD1-208ENST00000552890 TRIM9Q9C026 710 aa11.27□□□□□ -0.61
TRAFD1-208ENST00000552890 CCDC113Q9H0I3 377 aa11.27□□□□□ -0.61
TRAFD1-208ENST00000552890 SEMA6BQ9H3T3 888 aa11.27□□□□□ -0.61
TRAFD1-208ENST00000552890 MRPL44Q9H9J2 332 aaKnown RBP11.27□□□□□ -0.61
TRAFD1-208ENST00000552890 RSAD1Q9HA92 442 aa11.27□□□□□ -0.61
TRAFD1-208ENST00000552890 PANK4Q9NVE7 773 aa11.27□□□□□ -0.61
TRAFD1-208ENST00000552890 RMND1Q9NWS8 449 aa11.27□□□□□ -0.61
TRAFD1-208ENST00000552890 UBE4BO95155 1302 aa11.27□□□□□ -0.61
TRAFD1-208ENST00000552890 A0A087WWV3 80 aa11.26□□□□□ -0.61
TRAFD1-208ENST00000552890 FRMD3A2A2Y4 597 aa11.26□□□□□ -0.61
TRAFD1-208ENST00000552890 K7ENM7 598 aa11.26□□□□□ -0.61
TRAFD1-208ENST00000552890 HNRNPDLO14979 420 aaKnown RBP11.26□□□□□ -0.61
TRAFD1-208ENST00000552890 EIF3DO15371 548 aaKnown RBP eCLIP11.26□□□□□ -0.61
TRAFD1-208ENST00000552890 XPOTO43592 962 aaKnown RBP11.26□□□□□ -0.61
TRAFD1-208ENST00000552890 NCK2O43639 380 aa11.26□□□□□ -0.61
TRAFD1-208ENST00000552890 LDHAP00338 332 aaKnown RBP11.26□□□□□ -0.61
TRAFD1-208ENST00000552890 PAX3P23760 479 aa11.26□□□□□ -0.61
TRAFD1-208ENST00000552890 LIG4P49917 911 aa11.26□□□□□ -0.61
TRAFD1-208ENST00000552890 ASIC1P78348 528 aa11.26□□□□□ -0.61
TRAFD1-208ENST00000552890 GTF2BQ00403 316 aa11.26□□□□□ -0.61
TRAFD1-208ENST00000552890 RAD51AP2Q09MP3 1159 aa11.26□□□□□ -0.61
TRAFD1-208ENST00000552890 MAPK7Q13164 816 aa11.26□□□□□ -0.61
TRAFD1-208ENST00000552890 E2F4Q16254 413 aa11.26□□□□□ -0.61
TRAFD1-208ENST00000552890 NOMO2Q5JPE7 1267 aa11.26□□□□□ -0.61
TRAFD1-208ENST00000552890 MPZL3Q6UWV2 235 aa11.26□□□□□ -0.61
TRAFD1-208ENST00000552890 USP49Q70CQ1 688 aa11.26□□□□□ -0.61
TRAFD1-208ENST00000552890 UNC13DQ70J99 1090 aa11.26□□□□□ -0.61
TRAFD1-208ENST00000552890 ZNF598Q86UK7 904 aaKnown RBP11.26□□□□□ -0.61
TRAFD1-208ENST00000552890 RTN4RL1Q86UN2 441 aaPredicted RBP11.26□□□□□ -0.61
TRAFD1-208ENST00000552890 CD302Q8IX05 232 aa11.26□□□□□ -0.61
TRAFD1-208ENST00000552890 DAW1Q8N136 415 aa11.26□□□□□ -0.61
TRAFD1-208ENST00000552890 CRIPAKQ8N1N5 446 aa11.26□□□□□ -0.61
TRAFD1-208ENST00000552890 FSIP1Q8NA03 581 aa11.26□□□□□ -0.61
TRAFD1-208ENST00000552890 RNF169Q8NCN4 708 aa11.26□□□□□ -0.61
TRAFD1-208ENST00000552890 TIGD1Q96MW7 591 aa11.26□□□□□ -0.61
TRAFD1-208ENST00000552890 ACO2Q99798 780 aaKnown RBP11.26□□□□□ -0.61
TRAFD1-208ENST00000552890 PANK2Q9BZ23 570 aa11.26□□□□□ -0.61
TRAFD1-208ENST00000552890 MINDY3Q9H8M7 445 aa11.26□□□□□ -0.61
TRAFD1-208ENST00000552890 PLEKHA5Q9HAU0 1116 aa11.26□□□□□ -0.61
TRAFD1-208ENST00000552890 SLC38A7Q9NVC3 462 aa11.26□□□□□ -0.61
TRAFD1-208ENST00000552890 TBX20Q9UMR3 447 aa11.26□□□□□ -0.61
TRAFD1-208ENST00000552890 LINC01553A4QN01 128 aa11.25□□□□□ -0.61
TRAFD1-208ENST00000552890 MYMKA6NI61 221 aa11.25□□□□□ -0.61
TRAFD1-208ENST00000552890 TBKBP1A7MCY6 615 aa11.25□□□□□ -0.61
TRAFD1-208ENST00000552890 C5orf67F2Z3F1 127 aa11.25□□□□□ -0.61
TRAFD1-208ENST00000552890 INPPL1O15357 1258 aa11.25□□□□□ -0.61
TRAFD1-208ENST00000552890 SLC16A4O15374 487 aa11.25□□□□□ -0.61
TRAFD1-208ENST00000552890 MGEA5O60502 916 aa11.25□□□□□ -0.61
TRAFD1-208ENST00000552890 KINO60870 393 aaKnown RBP11.25□□□□□ -0.61
TRAFD1-208ENST00000552890 PIGRP01833 764 aa11.25□□□□□ -0.61
TRAFD1-208ENST00000552890 PFKFB1P16118 471 aa11.25□□□□□ -0.61
TRAFD1-208ENST00000552890 BMPR1AP36894 532 aa11.25□□□□□ -0.61
TRAFD1-208ENST00000552890 PPP1R2P41236 205 aa11.25□□□□□ -0.61
TRAFD1-208ENST00000552890 MATR3P43243 847 aaKnown RBP eCLIP11.25□□□□□ -0.61
TRAFD1-208ENST00000552890 UBE2HP62256 183 aa11.25□□□□□ -0.61
TRAFD1-208ENST00000552890 FAM160A1Q05DH4 1040 aa11.25□□□□□ -0.61
TRAFD1-208ENST00000552890 AMHR2Q16671 573 aa11.25□□□□□ -0.61
TRAFD1-208ENST00000552890 ZNF568Q3ZCX4 644 aa11.25□□□□□ -0.61
TRAFD1-208ENST00000552890 FAM117BQ6P1L5 589 aa11.25□□□□□ -0.61
TRAFD1-208ENST00000552890 HS2ST1Q7LGA3 356 aa11.25□□□□□ -0.61
TRAFD1-208ENST00000552890 DYMQ7RTS9 669 aa11.25□□□□□ -0.61
TRAFD1-208ENST00000552890 ZNF720Q7Z2F6 126 aa11.25□□□□□ -0.61
TRAFD1-208ENST00000552890 TMEM192Q8IY95 271 aa11.25□□□□□ -0.61
TRAFD1-208ENST00000552890 SYCP3Q8IZU3 236 aa11.25□□□□□ -0.61
TRAFD1-208ENST00000552890 FBXO22Q8NEZ5 403 aa11.25□□□□□ -0.61
TRAFD1-208ENST00000552890 ZNF668Q96K58 619 aaPredicted RBP11.25□□□□□ -0.61
TRAFD1-208ENST00000552890 TMEM175Q9BSA9 504 aa11.25□□□□□ -0.61
TRAFD1-208ENST00000552890 NKX2-4Q9H2Z4 354 aa11.25□□□□□ -0.61
TRAFD1-208ENST00000552890 KIAA1586Q9HCI6 787 aa11.25□□□□□ -0.61
TRAFD1-208ENST00000552890 EXOC1Q9NV70 894 aa11.25□□□□□ -0.61
TRAFD1-208ENST00000552890 LZTS1Q9Y250 596 aa11.25□□□□□ -0.61
TRAFD1-208ENST00000552890 HPSEQ9Y251 543 aa11.25□□□□□ -0.61
TRAFD1-208ENST00000552890 SSX2IPQ9Y2D8 614 aa11.25□□□□□ -0.61
TRAFD1-208ENST00000552890 MYH11P35749 1972 aa11.25□□□□□ -0.61
TRAFD1-208ENST00000552890 LPXNO60711 386 aa11.24□□□□□ -0.61
TRAFD1-208ENST00000552890 CSDE1O75534 798 aaKnown RBP11.24□□□□□ -0.61
TRAFD1-208ENST00000552890 ZNF202O95125 648 aa11.24□□□□□ -0.61
TRAFD1-208ENST00000552890 ALDH2P05091 517 aa11.24□□□□□ -0.61
TRAFD1-208ENST00000552890 CLTAP09496 248 aa11.24□□□□□ -0.61
TRAFD1-208ENST00000552890 LIG1P18858 919 aa11.24□□□□□ -0.61
TRAFD1-208ENST00000552890 POU3F3P20264 500 aaPredicted RBP11.24□□□□□ -0.61
TRAFD1-208ENST00000552890 PTMSP20962 102 aa11.24□□□□□ -0.61
TRAFD1-208ENST00000552890 FGFR4P22455 802 aa11.24□□□□□ -0.61
TRAFD1-208ENST00000552890 RABGGTBP53611 331 aa11.24□□□□□ -0.61
TRAFD1-208ENST00000552890 TAP1Q03518 808 aa11.24□□□□□ -0.61
TRAFD1-208ENST00000552890 NOLC1Q14978 699 aaKnown RBP eCLIP11.24□□□□□ -0.61
TRAFD1-208ENST00000552890 CLEC17AQ6ZS10 378 aa11.24□□□□□ -0.61
TRAFD1-208ENST00000552890 USP37Q86T82 979 aa11.24□□□□□ -0.61
TRAFD1-208ENST00000552890 MAP4K3Q8IVH8 894 aa11.24□□□□□ -0.61
TRAFD1-208ENST00000552890 TMEM87AQ8NBN3 555 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms