RNA–Protein interactions for RNA: ENST00000552590.6

PRIM1-208, Transcript of DNA primase subunit 1, humanhuman

TSL 5

Gene PRIM1, Length 1,459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-208ENST00000552590 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.62□□□□□ -0.879e-7■■■■□ 19.4
PRIM1-208ENST00000552590 C1orf112Q9NSG2 853 aa9.62□□□□□ -0.87
PRIM1-208ENST00000552590 RNF19AQ9NV58 838 aa9.62□□□□□ -0.87
PRIM1-208ENST00000552590 PAG1Q9NWQ8 432 aa9.62□□□□□ -0.87
PRIM1-208ENST00000552590 TMEM161AQ9NX61 479 aa9.62□□□□□ -0.87
PRIM1-208ENST00000552590 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.62□□□□□ -0.872e-7■□□□□ 9
PRIM1-208ENST00000552590 PTPRQQ9UMZ3 2332 aa9.61□□□□□ -0.87
PRIM1-208ENST00000552590 M0QZ92 97 aa9.61□□□□□ -0.87
PRIM1-208ENST00000552590 RFPL2O75678 378 aa9.61□□□□□ -0.87
PRIM1-208ENST00000552590 TDO2P48775 406 aa9.61□□□□□ -0.87
PRIM1-208ENST00000552590 SATB1Q01826 763 aa9.61□□□□□ -0.87
PRIM1-208ENST00000552590 SP4Q02446 784 aa9.61□□□□□ -0.87
PRIM1-208ENST00000552590 GIT2Q14161 759 aa9.61□□□□□ -0.87
PRIM1-208ENST00000552590 C4orf48Q5BLP8 95 aa9.61□□□□□ -0.87
PRIM1-208ENST00000552590 HEATR6Q6AI08 1181 aaKnown RBP9.61□□□□□ -0.87
PRIM1-208ENST00000552590 GIMAP6Q6P9H5 292 aa9.61□□□□□ -0.87
PRIM1-208ENST00000552590 IL31RAQ8NI17 732 aa9.61□□□□□ -0.87
PRIM1-208ENST00000552590 SMG7Q92540 1137 aaKnown RBP9.61□□□□□ -0.87
PRIM1-208ENST00000552590 PDCD2LQ9BRP1 358 aa9.61□□□□□ -0.87
PRIM1-208ENST00000552590 CELF4Q9BZC1 486 aaKnown RBP9.61□□□□□ -0.87
PRIM1-208ENST00000552590 CHRDQ9H2X0 955 aa9.61□□□□□ -0.87
PRIM1-208ENST00000552590 MAN1C1Q9NR34 630 aa9.61□□□□□ -0.87
PRIM1-208ENST00000552590 INPPL1O15357 1258 aa9.6□□□□□ -0.87
PRIM1-208ENST00000552590 HSPD1P10809 573 aaKnown RBP9.6□□□□□ -0.87
PRIM1-208ENST00000552590 FSHRP23945 695 aa9.6□□□□□ -0.87
PRIM1-208ENST00000552590 MARK3P27448 753 aa9.6□□□□□ -0.87
PRIM1-208ENST00000552590 CNR2P34972 360 aa9.6□□□□□ -0.87
PRIM1-208ENST00000552590 CCR3P51677 355 aa9.6□□□□□ -0.87
PRIM1-208ENST00000552590 BCAR1P56945 870 aa9.6□□□□□ -0.87
PRIM1-208ENST00000552590 FAM189BP81408 668 aa9.6□□□□□ -0.87
PRIM1-208ENST00000552590 AGERQ15109 404 aa9.6□□□□□ -0.87
PRIM1-208ENST00000552590 ZNF852Q6ZMS4 543 aa9.6□□□□□ -0.87
PRIM1-208ENST00000552590 VSIG10LQ86VR7 867 aa9.6□□□□□ -0.87
PRIM1-208ENST00000552590 IL1RAPL2Q9NP60 686 aa9.6□□□□□ -0.87
PRIM1-208ENST00000552590 NDRG2Q9UN36 371 aaKnown RBP9.6□□□□□ -0.87
PRIM1-208ENST00000552590 GINS2Q9Y248 185 aa9.6□□□□□ -0.87
PRIM1-208ENST00000552590 NOC2LQ9Y3T9 749 aaKnown RBP9.6□□□□□ -0.87
PRIM1-208ENST00000552590 CREBBPQ92793 2442 aa9.6□□□□□ -0.87
PRIM1-208ENST00000552590 NBPF19A0A087WUL8 3843 aa9.59□□□□□ -0.87
PRIM1-208ENST00000552590 SHISA7A6NL88 538 aa9.59□□□□□ -0.87
PRIM1-208ENST00000552590 J3QKU1 62 aa9.59□□□□□ -0.87
PRIM1-208ENST00000552590 CNPP09543 421 aaKnown RBP9.59□□□□□ -0.87
PRIM1-208ENST00000552590 CEACAM1P13688 526 aa9.59□□□□□ -0.87
PRIM1-208ENST00000552590 ALDH7A1P49419 539 aaKnown RBP9.59□□□□□ -0.87
PRIM1-208ENST00000552590 PFKPQ01813 784 aa9.59□□□□□ -0.87
PRIM1-208ENST00000552590 METTL7BQ6UX53 244 aa9.59□□□□□ -0.87
PRIM1-208ENST00000552590 MCF2L2Q86YR7 1114 aa9.59□□□□□ -0.87
PRIM1-208ENST00000552590 ABI1Q8IZP0 508 aa9.59□□□□□ -0.87
PRIM1-208ENST00000552590 ZNF707Q96C28 371 aaPredicted RBP9.59□□□□□ -0.87
PRIM1-208ENST00000552590 EDEM2Q9BV94 578 aa9.59□□□□□ -0.87
PRIM1-208ENST00000552590 CPVLQ9H3G5 476 aa9.59□□□□□ -0.87
PRIM1-208ENST00000552590 BOLA2Q9H3K6 86 aa9.59□□□□□ -0.87
PRIM1-208ENST00000552590 ATMQ13315 3056 aa9.59□□□□□ -0.87
PRIM1-208ENST00000552590 TSPY2A6NKD2 308 aa9.59□□□□□ -0.87
PRIM1-208ENST00000552590 RPS6KA5O75582 802 aa9.59□□□□□ -0.87
PRIM1-208ENST00000552590 EPN2O95208 641 aa9.59□□□□□ -0.87
PRIM1-208ENST00000552590 CFBP00751 764 aa9.59□□□□□ -0.87
PRIM1-208ENST00000552590 APPP05067 770 aa9.59□□□□□ -0.87
PRIM1-208ENST00000552590 SSBP05455 408 aaKnown RBP eCLIP9.59□□□□□ -0.87
PRIM1-208ENST00000552590 HOXC13P31276 330 aa9.59□□□□□ -0.87
PRIM1-208ENST00000552590 CXCL12P48061 93 aa9.59□□□□□ -0.87
PRIM1-208ENST00000552590 POLGP54098 1239 aaPredicted RBP9.59□□□□□ -0.87
PRIM1-208ENST00000552590 SCAPQ12770 1279 aa9.59□□□□□ -0.87
PRIM1-208ENST00000552590 DAB2IPQ5VWQ8 1189 aa9.59□□□□□ -0.87
PRIM1-208ENST00000552590 DDX53Q86TM3 631 aaKnown RBP9.59□□□□□ -0.87
PRIM1-208ENST00000552590 LONP2Q86WA8 852 aa9.59□□□□□ -0.87
PRIM1-208ENST00000552590 BCL7CQ8WUZ0 217 aaPredicted RBP9.59□□□□□ -0.87
PRIM1-208ENST00000552590 EMILIN2Q9BXX0 1053 aa9.59□□□□□ -0.87
PRIM1-208ENST00000552590 BCL11AQ9H165 835 aa9.59□□□□□ -0.87
PRIM1-208ENST00000552590 ELAC1Q9H777 363 aaKnown RBP9.59□□□□□ -0.87
PRIM1-208ENST00000552590 PIDD1Q9HB75 910 aa9.59□□□□□ -0.87
PRIM1-208ENST00000552590 HEBP1Q9NRV9 189 aa9.59□□□□□ -0.87
PRIM1-208ENST00000552590 ST3GAL5Q9UNP4 418 aa9.59□□□□□ -0.87
PRIM1-208ENST00000552590 MRPS17Q9Y2R5 130 aaKnown RBP9.59□□□□□ -0.87
PRIM1-208ENST00000552590 ABCB11O95342 1321 aa9.58□□□□□ -0.88
PRIM1-208ENST00000552590 MGAQ8IWI9 3026 aa9.58□□□□□ -0.88
PRIM1-208ENST00000552590 RELNP78509 3460 aa9.58□□□□□ -0.88
PRIM1-208ENST00000552590 PDHBP11177 359 aa9.58□□□□□ -0.88
PRIM1-208ENST00000552590 SRSF1Q07955 248 aaKnown RBP eCLIP9.58□□□□□ -0.88
PRIM1-208ENST00000552590 PGM5Q15124 567 aa9.58□□□□□ -0.88
PRIM1-208ENST00000552590 CLLU1OSQ5K130 101 aa9.58□□□□□ -0.88
PRIM1-208ENST00000552590 CYP26C1Q6V0L0 522 aa9.58□□□□□ -0.88
PRIM1-208ENST00000552590 BPHLQ86WA6 291 aaPredicted RBP9.58□□□□□ -0.88
PRIM1-208ENST00000552590 RNF169Q8NCN4 708 aa9.58□□□□□ -0.88
PRIM1-208ENST00000552590 DEFB124Q8NES8 71 aa9.58□□□□□ -0.88
PRIM1-208ENST00000552590 TMEM40Q8WWA1 233 aa9.58□□□□□ -0.88
PRIM1-208ENST00000552590 PHKBQ93100 1093 aa9.58□□□□□ -0.88
PRIM1-208ENST00000552590 CRELD1Q96HD1 420 aa9.58□□□□□ -0.88
PRIM1-208ENST00000552590 VN1R3Q9BXE9 311 aa9.58□□□□□ -0.88
PRIM1-208ENST00000552590 RHOBTB2Q9BYZ6 727 aa9.58□□□□□ -0.88
PRIM1-208ENST00000552590 MAF1Q9H063 256 aa9.58□□□□□ -0.88
PRIM1-208ENST00000552590 C1orf115Q9H7X2 142 aa9.58□□□□□ -0.88
PRIM1-208ENST00000552590 KDM3AQ9Y4C1 1321 aa9.57□□□□□ -0.88
PRIM1-208ENST00000552590 COL6A6A6NMZ7 2263 aa9.57□□□□□ -0.88
PRIM1-208ENST00000552590 MYH6P13533 1939 aa9.57□□□□□ -0.88
PRIM1-208ENST00000552590 DOPEY2Q9Y3R5 2298 aa9.57□□□□□ -0.88
PRIM1-208ENST00000552590 RPLP2P05387 115 aaKnown RBP9.57□□□□□ -0.88
PRIM1-208ENST00000552590 SPATA31D3P0C874 917 aa9.57□□□□□ -0.88
PRIM1-208ENST00000552590 CSRP1P21291 193 aaKnown RBP9.57□□□□□ -0.88
PRIM1-208ENST00000552590 MPLP40238 635 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms