RNA–Protein interactions for RNA: ENST00000552465.1

CACNB3-222, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-222ENST00000552465 PCDHA4Q9UN74 947 aa18.9■□□□□ 0.62
CACNB3-222ENST00000552465 SIT1Q9Y3P8 196 aa18.9■□□□□ 0.62
CACNB3-222ENST00000552465 ANHXE9PGG2 379 aa18.89■□□□□ 0.61
CACNB3-222ENST00000552465 EML1O00423 815 aa18.89■□□□□ 0.61
CACNB3-222ENST00000552465 GAS2O43903 313 aaKnown RBP18.89■□□□□ 0.61
CACNB3-222ENST00000552465 C1RP00736 705 aa18.89■□□□□ 0.61
CACNB3-222ENST00000552465 SP9P0CG40 484 aa18.89■□□□□ 0.61
CACNB3-222ENST00000552465 QARSP47897 775 aaKnown RBP18.89■□□□□ 0.61
CACNB3-222ENST00000552465 DSC1Q08554 894 aa18.89■□□□□ 0.61
CACNB3-222ENST00000552465 LAMTOR4Q0VGL1 99 aa18.89■□□□□ 0.61
CACNB3-222ENST00000552465 POTEGQ6S5H5 508 aa18.89■□□□□ 0.61
CACNB3-222ENST00000552465 MOXD1Q6UVY6 613 aa18.89■□□□□ 0.61
CACNB3-222ENST00000552465 PALB2Q86YC2 1186 aa18.89■□□□□ 0.61
CACNB3-222ENST00000552465 EXOC8Q8IYI6 725 aa18.89■□□□□ 0.61
CACNB3-222ENST00000552465 PSPC1Q8WXF1 523 aaKnown RBP18.89■□□□□ 0.61
CACNB3-222ENST00000552465 CEP170P1Q96L14 293 aa18.89■□□□□ 0.61
CACNB3-222ENST00000552465 JAKMIP1Q96N16 626 aaKnown RBP18.89■□□□□ 0.61
CACNB3-222ENST00000552465 GAD1Q99259 594 aa18.89■□□□□ 0.61
CACNB3-222ENST00000552465 AGXT2Q9BYV1 514 aa18.89■□□□□ 0.61
CACNB3-222ENST00000552465 RNF39Q9H2S5 420 aa18.89■□□□□ 0.61
CACNB3-222ENST00000552465 PLEKHA4Q9H4M7 779 aa18.89■□□□□ 0.61
CACNB3-222ENST00000552465 DHX33Q9H6R0 707 aaKnown RBP18.89■□□□□ 0.61
CACNB3-222ENST00000552465 PIDD1Q9HB75 910 aa18.89■□□□□ 0.61
CACNB3-222ENST00000552465 ARHGEF3Q9NR81 526 aa18.89■□□□□ 0.61
CACNB3-222ENST00000552465 CHST7Q9NS84 486 aa18.89■□□□□ 0.61
CACNB3-222ENST00000552465 MIOSQ9NXC5 875 aa18.89■□□□□ 0.61
CACNB3-222ENST00000552465 PPME1Q9Y570 386 aa18.89■□□□□ 0.61
CACNB3-222ENST00000552465 IPPQ9Y573 584 aa18.89■□□□□ 0.61
CACNB3-222ENST00000552465 C2orf16Q68DN1 1984 aa18.89■□□□□ 0.61
CACNB3-222ENST00000552465 DMDP11532 3685 aa18.88■□□□□ 0.61
CACNB3-222ENST00000552465 ARL5CA6NH57 179 aa18.88■□□□□ 0.61
CACNB3-222ENST00000552465 M0R2N6 131 aa18.88■□□□□ 0.61
CACNB3-222ENST00000552465 PUM1Q14671 1186 aaKnown RBP eCLIP18.88■□□□□ 0.61
CACNB3-222ENST00000552465 ZC3H14Q6PJT7 736 aaKnown RBP18.88■□□□□ 0.61
CACNB3-222ENST00000552465 BLOC1S2Q6QNY1 142 aa18.88■□□□□ 0.61
CACNB3-222ENST00000552465 C1orf210Q8IVY1 113 aa18.88■□□□□ 0.61
CACNB3-222ENST00000552465 NCOA5Q9HCD5 579 aaKnown RBP18.88■□□□□ 0.61
CACNB3-222ENST00000552465 SLC2A4RGQ9NR83 387 aa18.88■□□□□ 0.61
CACNB3-222ENST00000552465 F8W810 466 aa18.87■□□□□ 0.61
CACNB3-222ENST00000552465 ASAP2O43150 1006 aa18.87■□□□□ 0.61
CACNB3-222ENST00000552465 TGM5O43548 720 aa18.87■□□□□ 0.61
CACNB3-222ENST00000552465 DKC1O60832 514 aaKnown RBP eCLIP18.87■□□□□ 0.61
CACNB3-222ENST00000552465 PDIA3P30101 505 aaKnown RBP18.87■□□□□ 0.61
CACNB3-222ENST00000552465 MLH1P40692 756 aa18.87■□□□□ 0.61
CACNB3-222ENST00000552465 RFC5P40937 340 aa18.87■□□□□ 0.61
CACNB3-222ENST00000552465 CCT2P78371 535 aaKnown RBP18.87■□□□□ 0.61
CACNB3-222ENST00000552465 PPP2R5CQ13362 524 aa18.87■□□□□ 0.61
CACNB3-222ENST00000552465 HTR4Q13639 388 aa18.87■□□□□ 0.61
CACNB3-222ENST00000552465 LILRA6Q6PI73 481 aa18.87■□□□□ 0.61
CACNB3-222ENST00000552465 DCLRE1AQ6PJP8 1040 aa18.87■□□□□ 0.61
CACNB3-222ENST00000552465 BLIDQ8IZY5 108 aa18.87■□□□□ 0.61
CACNB3-222ENST00000552465 RNF149Q8NC42 400 aa18.87■□□□□ 0.61
CACNB3-222ENST00000552465 RUBCNQ92622 972 aa18.87■□□□□ 0.61
CACNB3-222ENST00000552465 COLEC11Q9BWP8 271 aa18.87■□□□□ 0.61
CACNB3-222ENST00000552465 EIF2AQ9BY44 585 aaKnown RBP18.87■□□□□ 0.61
CACNB3-222ENST00000552465 PRKD2Q9BZL6 878 aa18.87■□□□□ 0.61
CACNB3-222ENST00000552465 ZDHHC7Q9NXF8 308 aa18.87■□□□□ 0.61
CACNB3-222ENST00000552465 WRAP73Q9P2S5 460 aaPredicted RBP18.87■□□□□ 0.61
CACNB3-222ENST00000552465 DDX25Q9UHL0 483 aaKnown RBP18.87■□□□□ 0.61
CACNB3-222ENST00000552465 EP300Q09472 2414 aaPredicted RBP18.86■□□□□ 0.61
CACNB3-222ENST00000552465 NR1I2O75469 434 aa18.86■□□□□ 0.61
CACNB3-222ENST00000552465 P4HBP07237 508 aaKnown RBP18.86■□□□□ 0.61
CACNB3-222ENST00000552465 RPS6KB1P23443 525 aa18.86■□□□□ 0.61
CACNB3-222ENST00000552465 SCNN1GP51170 649 aa18.86■□□□□ 0.61
CACNB3-222ENST00000552465 GET4Q7L5D6 327 aaPredicted RBP18.86■□□□□ 0.61
CACNB3-222ENST00000552465 FERMT3Q86UX7 667 aa18.86■□□□□ 0.61
CACNB3-222ENST00000552465 GPR65Q8IYL9 337 aa18.86■□□□□ 0.61
CACNB3-222ENST00000552465 TCP11Q8WWU5 503 aa18.86■□□□□ 0.61
CACNB3-222ENST00000552465 B3GALT6Q96L58 329 aa18.86■□□□□ 0.61
CACNB3-222ENST00000552465 HINFPQ9BQA5 517 aa18.86■□□□□ 0.61
CACNB3-222ENST00000552465 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.86■□□□□ 0.61
CACNB3-222ENST00000552465 FNIP2Q9P278 1114 aa18.86■□□□□ 0.61
CACNB3-222ENST00000552465 VAV3Q9UKW4 847 aa18.86■□□□□ 0.61
CACNB3-222ENST00000552465 HES2Q9Y543 173 aa18.86■□□□□ 0.61
CACNB3-222ENST00000552465 SNX14Q9Y5W7 946 aa18.86■□□□□ 0.61
CACNB3-222ENST00000552465 NUMBLQ9Y6R0 609 aa18.86■□□□□ 0.61
CACNB3-222ENST00000552465 DCHS1Q96JQ0 3298 aa18.86■□□□□ 0.61
CACNB3-222ENST00000552465 CACNA1AO00555 2505 aa18.85■□□□□ 0.61
CACNB3-222ENST00000552465 SLC37A4O43826 429 aa18.85■□□□□ 0.61
CACNB3-222ENST00000552465 TSPAN1O60635 241 aa18.85■□□□□ 0.61
CACNB3-222ENST00000552465 ERLIN2O94905 339 aa18.85■□□□□ 0.61
CACNB3-222ENST00000552465 GLULP15104 373 aa18.85■□□□□ 0.61
CACNB3-222ENST00000552465 AXLP30530 894 aa18.85■□□□□ 0.61
CACNB3-222ENST00000552465 EVCP57679 992 aa18.85■□□□□ 0.61
CACNB3-222ENST00000552465 STARD6P59095 220 aa18.85■□□□□ 0.61
CACNB3-222ENST00000552465 PCBP1Q15365 356 aaKnown RBP eCLIP18.85■□□□□ 0.61
CACNB3-222ENST00000552465 TRIM22Q8IYM9 498 aa18.85■□□□□ 0.61
CACNB3-222ENST00000552465 DCLK2Q8N568 766 aa18.85■□□□□ 0.61
CACNB3-222ENST00000552465 DAGLBQ8NCG7 672 aa18.85■□□□□ 0.61
CACNB3-222ENST00000552465 ST13P5Q8NFI4 369 aaPredicted RBP18.85■□□□□ 0.61
CACNB3-222ENST00000552465 CCDC51Q96ER9 411 aa18.85■□□□□ 0.61
CACNB3-222ENST00000552465 ZFP42Q96MM3 310 aa18.85■□□□□ 0.61
CACNB3-222ENST00000552465 GPR62Q9BZJ7 368 aa18.85■□□□□ 0.61
CACNB3-222ENST00000552465 SLKQ9H2G2 1235 aaPredicted RBP18.85■□□□□ 0.61
CACNB3-222ENST00000552465 BMP2KQ9NSY1 1161 aaPredicted RBP18.85■□□□□ 0.61
CACNB3-222ENST00000552465 VPS13AQ96RL7 3174 aa18.85■□□□□ 0.61
CACNB3-222ENST00000552465 POTEMA6NI47 508 aa18.84■□□□□ 0.61
CACNB3-222ENST00000552465 CDC45O75419 566 aa18.84■□□□□ 0.61
CACNB3-222ENST00000552465 ZMYND10O75800 440 aa18.84■□□□□ 0.61
CACNB3-222ENST00000552465 HSPA4P34932 840 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms