RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 DAGLBQ8NCG7 672 aa15.85■□□□□ 0.13
CHMP1A-210ENST00000551981 HDAC7Q8WUI4 952 aa15.85■□□□□ 0.13
CHMP1A-210ENST00000551981 TCP11Q8WWU5 503 aa15.85■□□□□ 0.13
CHMP1A-210ENST00000551981 TMEM143Q96AN5 459 aa15.85■□□□□ 0.13
CHMP1A-210ENST00000551981 DHX33Q9H6R0 707 aaKnown RBP15.85■□□□□ 0.13
CHMP1A-210ENST00000551981 EPS15L1Q9UBC2 864 aa15.85■□□□□ 0.13
CHMP1A-210ENST00000551981 TDRD15B5MCY1 1934 aaKnown RBP15.85■□□□□ 0.13
CHMP1A-210ENST00000551981 CPLX1O14810 134 aa15.84■□□□□ 0.13
CHMP1A-210ENST00000551981 N4BP1O75113 896 aaKnown RBP15.84■□□□□ 0.13
CHMP1A-210ENST00000551981 P4HBP07237 508 aaKnown RBP15.84■□□□□ 0.13
CHMP1A-210ENST00000551981 EVCP57679 992 aa15.84■□□□□ 0.13
CHMP1A-210ENST00000551981 KRT25Q7Z3Z0 450 aa15.84■□□□□ 0.13
CHMP1A-210ENST00000551981 COLGALT2Q8IYK4 626 aa15.84■□□□□ 0.13
CHMP1A-210ENST00000551981 SMG7Q92540 1137 aaKnown RBP15.84■□□□□ 0.13
CHMP1A-210ENST00000551981 CCDC51Q96ER9 411 aa15.84■□□□□ 0.13
CHMP1A-210ENST00000551981 FAM20AQ96MK3 541 aa15.84■□□□□ 0.13
CHMP1A-210ENST00000551981 MINDY3Q9H8M7 445 aa15.84■□□□□ 0.13
CHMP1A-210ENST00000551981 PIDD1Q9HB75 910 aa15.84■□□□□ 0.13
CHMP1A-210ENST00000551981 RXFP1Q9HBX9 757 aa15.84■□□□□ 0.13
CHMP1A-210ENST00000551981 MARCH5Q9NX47 278 aa15.84■□□□□ 0.13
CHMP1A-210ENST00000551981 FRYLO94915 3013 aa15.84■□□□□ 0.13
CHMP1A-210ENST00000551981 MTCL1Q9Y4B5 1905 aaKnown RBP15.84■□□□□ 0.13
CHMP1A-210ENST00000551981 DMXL1Q9Y485 3027 aa15.83■□□□□ 0.12
CHMP1A-210ENST00000551981 ARID2Q68CP9 1835 aa15.83■□□□□ 0.12
CHMP1A-210ENST00000551981 ARL5CA6NH57 179 aa15.83■□□□□ 0.12
CHMP1A-210ENST00000551981 M0R2N6 131 aa15.83■□□□□ 0.12
CHMP1A-210ENST00000551981 EML1O00423 815 aa15.83■□□□□ 0.12
CHMP1A-210ENST00000551981 C1RP00736 705 aa15.83■□□□□ 0.12
CHMP1A-210ENST00000551981 LMNAP02545 664 aaKnown RBP15.83■□□□□ 0.12
CHMP1A-210ENST00000551981 SRFP11831 508 aa15.83■□□□□ 0.12
CHMP1A-210ENST00000551981 AXLP30530 894 aa15.83■□□□□ 0.12
CHMP1A-210ENST00000551981 EMC2Q15006 297 aa15.83■□□□□ 0.12
CHMP1A-210ENST00000551981 INF2Q27J81 1249 aa15.83■□□□□ 0.12
CHMP1A-210ENST00000551981 KIAA0319Q5VV43 1072 aa15.83■□□□□ 0.12
CHMP1A-210ENST00000551981 NOTUMQ6P988 496 aa15.83■□□□□ 0.12
CHMP1A-210ENST00000551981 CPLX2Q6PUV4 134 aaKnown RBP15.83■□□□□ 0.12
CHMP1A-210ENST00000551981 CENPQQ7L2Z9 268 aaPredicted RBP15.83■□□□□ 0.12
CHMP1A-210ENST00000551981 OTUD6AQ7L8S5 288 aa15.83■□□□□ 0.12
CHMP1A-210ENST00000551981 HACE1Q8IYU2 909 aa15.83■□□□□ 0.12
CHMP1A-210ENST00000551981 SLC44A3Q8N4M1 653 aa15.83■□□□□ 0.12
CHMP1A-210ENST00000551981 RNF149Q8NC42 400 aa15.83■□□□□ 0.12
CHMP1A-210ENST00000551981 SMG8Q8ND04 991 aaKnown RBP15.83■□□□□ 0.12
CHMP1A-210ENST00000551981 RSAD2Q8WXG1 361 aa15.83■□□□□ 0.12
CHMP1A-210ENST00000551981 COLEC11Q9BWP8 271 aa15.83■□□□□ 0.12
CHMP1A-210ENST00000551981 PLEKHA4Q9H4M7 779 aa15.83■□□□□ 0.12
CHMP1A-210ENST00000551981 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.83■□□□□ 0.12
CHMP1A-210ENST00000551981 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.83■□□□□ 0.12
CHMP1A-210ENST00000551981 VAV3Q9UKW4 847 aa15.83■□□□□ 0.12
CHMP1A-210ENST00000551981 CA14Q9ULX7 337 aa15.83■□□□□ 0.12
CHMP1A-210ENST00000551981 IPPQ9Y573 584 aa15.83■□□□□ 0.12
CHMP1A-210ENST00000551981 DOCK8Q8NF50 2099 aa15.82■□□□□ 0.12
CHMP1A-210ENST00000551981 KRBA1A5PL33 1030 aa15.82■□□□□ 0.12
CHMP1A-210ENST00000551981 SLC37A4O43826 429 aa15.82■□□□□ 0.12
CHMP1A-210ENST00000551981 MARCH6O60337 910 aa15.82■□□□□ 0.12
CHMP1A-210ENST00000551981 RFPL2O75678 378 aa15.82■□□□□ 0.12
CHMP1A-210ENST00000551981 YWHABP31946 246 aaKnown RBP15.82■□□□□ 0.12
CHMP1A-210ENST00000551981 MLH1P40692 756 aa15.82■□□□□ 0.12
CHMP1A-210ENST00000551981 DSG1Q02413 1049 aa15.82■□□□□ 0.12
CHMP1A-210ENST00000551981 CREMQ03060 361 aa15.82■□□□□ 0.12
CHMP1A-210ENST00000551981 ZC3H14Q6PJT7 736 aaKnown RBP15.82■□□□□ 0.12
CHMP1A-210ENST00000551981 TAS1R1Q7RTX1 841 aa15.82■□□□□ 0.12
CHMP1A-210ENST00000551981 FERMT3Q86UX7 667 aa15.82■□□□□ 0.12
CHMP1A-210ENST00000551981 SKAP1Q86WV1 359 aa15.82■□□□□ 0.12
CHMP1A-210ENST00000551981 RNF168Q8IYW5 571 aaPredicted RBP15.82■□□□□ 0.12
CHMP1A-210ENST00000551981 ZNF579Q8NAF0 562 aaKnown RBP15.82■□□□□ 0.12
CHMP1A-210ENST00000551981 GAD1Q99259 594 aa15.82■□□□□ 0.12
CHMP1A-210ENST00000551981 LXNQ9BS40 222 aa15.82■□□□□ 0.12
CHMP1A-210ENST00000551981 TBC1D17Q9HA65 648 aa15.82■□□□□ 0.12
CHMP1A-210ENST00000551981 KCNMB3Q9NPA1 279 aa15.82■□□□□ 0.12
CHMP1A-210ENST00000551981 BMP2KQ9NSY1 1161 aaPredicted RBP15.82■□□□□ 0.12
CHMP1A-210ENST00000551981 CCDC194A0A1B0GVG4 234 aa15.81■□□□□ 0.12
CHMP1A-210ENST00000551981 TSPAN1O60635 241 aa15.81■□□□□ 0.12
CHMP1A-210ENST00000551981 SPATA31D3P0C874 917 aa15.81■□□□□ 0.12
CHMP1A-210ENST00000551981 MYBP10242 640 aa15.81■□□□□ 0.12
CHMP1A-210ENST00000551981 GCFC2P16383 781 aaKnown RBP15.81■□□□□ 0.12
CHMP1A-210ENST00000551981 DSC1Q08554 894 aa15.81■□□□□ 0.12
CHMP1A-210ENST00000551981 DNAH14Q0VDD8 3507 aa15.81■□□□□ 0.12
CHMP1A-210ENST00000551981 TFDP1Q14186 410 aa15.81■□□□□ 0.12
CHMP1A-210ENST00000551981 MXD4Q14582 209 aaPredicted RBP15.81■□□□□ 0.12
CHMP1A-210ENST00000551981 EPHA7Q15375 998 aa15.81■□□□□ 0.12
CHMP1A-210ENST00000551981 XKR9Q5GH70 373 aa15.81■□□□□ 0.12
CHMP1A-210ENST00000551981 PPP4R3AQ6IN85 833 aa15.81■□□□□ 0.12
CHMP1A-210ENST00000551981 SPATA31D4Q6ZUB0 917 aa15.81■□□□□ 0.12
CHMP1A-210ENST00000551981 PALB2Q86YC2 1186 aa15.81■□□□□ 0.12
CHMP1A-210ENST00000551981 C4orf19Q8IY42 314 aa15.81■□□□□ 0.12
CHMP1A-210ENST00000551981 ZNF707Q96C28 371 aaPredicted RBP15.81■□□□□ 0.12
CHMP1A-210ENST00000551981 MYADMQ96S97 322 aa15.81■□□□□ 0.12
CHMP1A-210ENST00000551981 MTRQ99707 1265 aa15.81■□□□□ 0.12
CHMP1A-210ENST00000551981 NAP1L4Q99733 375 aaKnown RBP15.81■□□□□ 0.12
CHMP1A-210ENST00000551981 EIF2AQ9BY44 585 aaKnown RBP15.81■□□□□ 0.12
CHMP1A-210ENST00000551981 TRIM6Q9C030 488 aaPredicted RBP15.81■□□□□ 0.12
CHMP1A-210ENST00000551981 ZDHHC7Q9NXF8 308 aa15.81■□□□□ 0.12
CHMP1A-210ENST00000551981 TBX3O15119 743 aa15.8■□□□□ 0.12
CHMP1A-210ENST00000551981 REC8O95072 547 aa15.8■□□□□ 0.12
CHMP1A-210ENST00000551981 PAPLNO95428 1278 aa15.8■□□□□ 0.12
CHMP1A-210ENST00000551981 EFEMP2O95967 443 aa15.8■□□□□ 0.12
CHMP1A-210ENST00000551981 LAMP2P13473 410 aa15.8■□□□□ 0.12
CHMP1A-210ENST00000551981 SCNN1GP51170 649 aa15.8■□□□□ 0.12
CHMP1A-210ENST00000551981 NPY5RQ15761 445 aa15.8■□□□□ 0.12
CHMP1A-210ENST00000551981 USP41Q3LFD5 358 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms