RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 HLA-CQ95604 372 aa11.69□□□□□ -0.54
PTCH1-225ENST00000551845 SAMD11Q96NU1 681 aa11.69□□□□□ -0.54
PTCH1-225ENST00000551845 TGS1Q96RS0 853 aaKnown RBP11.69□□□□□ -0.54
PTCH1-225ENST00000551845 ADPGKQ9BRR6 497 aa11.69□□□□□ -0.54
PTCH1-225ENST00000551845 KIFC3Q9BVG8 833 aa11.69□□□□□ -0.54
PTCH1-225ENST00000551845 TRIM6Q9C030 488 aaPredicted RBP11.69□□□□□ -0.54
PTCH1-225ENST00000551845 TMEM117Q9H0C3 514 aa11.69□□□□□ -0.54
PTCH1-225ENST00000551845 UBN1Q9NPG3 1134 aa11.69□□□□□ -0.54
PTCH1-225ENST00000551845 NCOR1O75376 2440 aa11.68□□□□□ -0.54
PTCH1-225ENST00000551845 TET1Q8NFU7 2136 aa11.68□□□□□ -0.54
PTCH1-225ENST00000551845 A0A1B0GVL5 298 aa11.68□□□□□ -0.54
PTCH1-225ENST00000551845 A0A1W2PQ27 194 aa11.68□□□□□ -0.54
PTCH1-225ENST00000551845 A0A1W2PQ64 194 aa11.68□□□□□ -0.54
PTCH1-225ENST00000551845 A0A1W2PQD8 194 aa11.68□□□□□ -0.54
PTCH1-225ENST00000551845 MYMKA6NI61 221 aa11.68□□□□□ -0.54
PTCH1-225ENST00000551845 TBKBP1A7MCY6 615 aa11.68□□□□□ -0.54
PTCH1-225ENST00000551845 N4BP3O15049 544 aa11.68□□□□□ -0.54
PTCH1-225ENST00000551845 B4GALT5O43286 388 aa11.68□□□□□ -0.54
PTCH1-225ENST00000551845 FGFR1P11362 822 aa11.68□□□□□ -0.54
PTCH1-225ENST00000551845 ITGA4P13612 1032 aa11.68□□□□□ -0.54
PTCH1-225ENST00000551845 IDEP14735 1019 aa11.68□□□□□ -0.54
PTCH1-225ENST00000551845 ZNF131P52739 623 aa11.68□□□□□ -0.54
PTCH1-225ENST00000551845 ERVK-21P61565 698 aa11.68□□□□□ -0.54
PTCH1-225ENST00000551845 E2F4Q16254 413 aa11.68□□□□□ -0.54
PTCH1-225ENST00000551845 CSPP1Q1MSJ5 1256 aa11.68□□□□□ -0.54
PTCH1-225ENST00000551845 TPRNQ4KMQ1 711 aa11.68□□□□□ -0.54
PTCH1-225ENST00000551845 UBXN11Q5T124 520 aa11.68□□□□□ -0.54
PTCH1-225ENST00000551845 SLC27A1Q6PCB7 646 aa11.68□□□□□ -0.54
PTCH1-225ENST00000551845 HAUS6Q7Z4H7 955 aa11.68□□□□□ -0.54
PTCH1-225ENST00000551845 APBB1IPQ7Z5R6 666 aaPredicted RBP11.68□□□□□ -0.54
PTCH1-225ENST00000551845 ZNF598Q86UK7 904 aaKnown RBP11.68□□□□□ -0.54
PTCH1-225ENST00000551845 FAM178BQ8IXR5 827 aa11.68□□□□□ -0.54
PTCH1-225ENST00000551845 CEP57L1Q8IYX8 460 aa11.68□□□□□ -0.54
PTCH1-225ENST00000551845 ARNTL2Q8WYA1 636 aa11.68□□□□□ -0.54
PTCH1-225ENST00000551845 RSPH1Q8WYR4 309 aa11.68□□□□□ -0.54
PTCH1-225ENST00000551845 STAMQ92783 540 aa11.68□□□□□ -0.54
PTCH1-225ENST00000551845 KHSRPQ92945 711 aaKnown RBP eCLIP11.68□□□□□ -0.54
PTCH1-225ENST00000551845 TCHPQ9BT92 498 aa11.68□□□□□ -0.54
PTCH1-225ENST00000551845 MRPL4Q9BYD3 311 aaKnown RBP11.68□□□□□ -0.54
PTCH1-225ENST00000551845 CCDC113Q9H0I3 377 aa11.68□□□□□ -0.54
PTCH1-225ENST00000551845 TNMDQ9H2S6 317 aa11.68□□□□□ -0.54
PTCH1-225ENST00000551845 MAGEF1Q9HAY2 307 aa11.68□□□□□ -0.54
PTCH1-225ENST00000551845 GDPD2Q9HCC8 539 aa11.68□□□□□ -0.54
PTCH1-225ENST00000551845 C11orf16Q9NQ32 467 aa11.68□□□□□ -0.54
PTCH1-225ENST00000551845 KBTBD4Q9NVX7 518 aa11.68□□□□□ -0.54
PTCH1-225ENST00000551845 ARHGAP28Q9P2N2 729 aa11.68□□□□□ -0.54
PTCH1-225ENST00000551845 KANSL3Q9P2N6 904 aa11.68□□□□□ -0.54
PTCH1-225ENST00000551845 USP25Q9UHP3 1055 aa11.68□□□□□ -0.54
PTCH1-225ENST00000551845 TNFSF13BQ9Y275 285 aa11.68□□□□□ -0.54
PTCH1-225ENST00000551845 RWDD3Q9Y3V2 267 aa11.68□□□□□ -0.54
PTCH1-225ENST00000551845 SCN5AQ14524 2016 aa11.67□□□□□ -0.54
PTCH1-225ENST00000551845 ADGRA3Q8IWK6 1321 aa11.67□□□□□ -0.54
PTCH1-225ENST00000551845 BDP1A6H8Y1 2624 aa11.67□□□□□ -0.54
PTCH1-225ENST00000551845 RB1P06400 928 aa11.67□□□□□ -0.54
PTCH1-225ENST00000551845 MAPTP10636 758 aaKnown RBP11.67□□□□□ -0.54
PTCH1-225ENST00000551845 GAP43P17677 238 aa11.67□□□□□ -0.54
PTCH1-225ENST00000551845 POU3F3P20264 500 aaPredicted RBP11.67□□□□□ -0.54
PTCH1-225ENST00000551845 BMPR1AP36894 532 aa11.67□□□□□ -0.54
PTCH1-225ENST00000551845 SYKP43405 635 aa11.67□□□□□ -0.54
PTCH1-225ENST00000551845 NCKAP1LP55160 1127 aa11.67□□□□□ -0.54
PTCH1-225ENST00000551845 LONRF3Q496Y0 759 aa11.67□□□□□ -0.54
PTCH1-225ENST00000551845 PAN2Q504Q3 1202 aaKnown RBP11.67□□□□□ -0.54
PTCH1-225ENST00000551845 HERC4Q5GLZ8 1057 aaPredicted RBP11.67□□□□□ -0.54
PTCH1-225ENST00000551845 SPOUT1Q5T280 376 aaKnown RBP11.67□□□□□ -0.54
PTCH1-225ENST00000551845 ATF7IP2Q5U623 682 aa11.67□□□□□ -0.54
PTCH1-225ENST00000551845 GLB1LQ6UWU2 654 aa11.67□□□□□ -0.54
PTCH1-225ENST00000551845 CDR2LQ86X02 465 aaPredicted RBP11.67□□□□□ -0.54
PTCH1-225ENST00000551845 CCDC65Q8IXS2 484 aa11.67□□□□□ -0.54
PTCH1-225ENST00000551845 TMEM192Q8IY95 271 aa11.67□□□□□ -0.54
PTCH1-225ENST00000551845 TMEM161BQ8NDZ6 487 aa11.67□□□□□ -0.54
PTCH1-225ENST00000551845 DNAJC19Q96DA6 116 aa11.67□□□□□ -0.54
PTCH1-225ENST00000551845 IPO9Q96P70 1041 aaKnown RBP11.67□□□□□ -0.54
PTCH1-225ENST00000551845 CASD1Q96PB1 797 aa11.67□□□□□ -0.54
PTCH1-225ENST00000551845 EIF2AQ9BY44 585 aaKnown RBP11.67□□□□□ -0.54
PTCH1-225ENST00000551845 AAASQ9NRG9 546 aa11.67□□□□□ -0.54
PTCH1-225ENST00000551845 TYW1Q9NV66 732 aaKnown RBP11.67□□□□□ -0.54
PTCH1-225ENST00000551845 PANK4Q9NVE7 773 aa11.67□□□□□ -0.54
PTCH1-225ENST00000551845 SEL1LQ9UBV2 794 aa11.67□□□□□ -0.54
PTCH1-225ENST00000551845 IPPQ9Y573 584 aa11.67□□□□□ -0.54
PTCH1-225ENST00000551845 CNTNAP2Q9UHC6 1331 aa11.66□□□□□ -0.54
PTCH1-225ENST00000551845 EVPLQ92817 2033 aa11.66□□□□□ -0.54
PTCH1-225ENST00000551845 OFD1O75665 1012 aa11.66□□□□□ -0.54
PTCH1-225ENST00000551845 ARHGEF15O94989 841 aa11.66□□□□□ -0.54
PTCH1-225ENST00000551845 NPTXRO95502 500 aa11.66□□□□□ -0.54
PTCH1-225ENST00000551845 SLFN14P0C7P3 912 aa11.66□□□□□ -0.54
PTCH1-225ENST00000551845 PFKFB1P16118 471 aa11.66□□□□□ -0.54
PTCH1-225ENST00000551845 AFMP43652 599 aa11.66□□□□□ -0.54
PTCH1-225ENST00000551845 MRE11P49959 708 aa11.66□□□□□ -0.54
PTCH1-225ENST00000551845 GATMP50440 423 aa11.66□□□□□ -0.54
PTCH1-225ENST00000551845 EPC2Q52LR7 807 aa11.66□□□□□ -0.54
PTCH1-225ENST00000551845 NT5DC1Q5TFE4 455 aa11.66□□□□□ -0.54
PTCH1-225ENST00000551845 ZNF720Q7Z2F6 126 aa11.66□□□□□ -0.54
PTCH1-225ENST00000551845 SMG8Q8ND04 991 aaKnown RBP11.66□□□□□ -0.54
PTCH1-225ENST00000551845 HELQQ8TDG4 1101 aa11.66□□□□□ -0.54
PTCH1-225ENST00000551845 KCNN1Q92952 543 aa11.66□□□□□ -0.54
PTCH1-225ENST00000551845 LPPQ93052 612 aa11.66□□□□□ -0.54
PTCH1-225ENST00000551845 CCDC34Q96HJ3 373 aa11.66□□□□□ -0.54
PTCH1-225ENST00000551845 ACO2Q99798 780 aaKnown RBP11.66□□□□□ -0.54
PTCH1-225ENST00000551845 C7orf25Q9BPX7 421 aa11.66□□□□□ -0.54
PTCH1-225ENST00000551845 C17orf80Q9BSJ5 609 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms