RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 NRDCO43847 1150 aa2.97□□□□□ -1.93
CPSF6-207ENST00000551516 TLR2O60603 784 aa2.97□□□□□ -1.93
CPSF6-207ENST00000551516 MAFKO60675 156 aa2.97□□□□□ -1.93
CPSF6-207ENST00000551516 KRT37O76014 449 aa2.97□□□□□ -1.93
CPSF6-207ENST00000551516 SASH1O94885 1247 aa2.97□□□□□ -1.93
CPSF6-207ENST00000551516 ZGLP1P0C6A0 271 aa2.97□□□□□ -1.93
CPSF6-207ENST00000551516 BPIP17213 487 aa2.97□□□□□ -1.93
CPSF6-207ENST00000551516 FPR2P25090 351 aa2.97□□□□□ -1.93
CPSF6-207ENST00000551516 CD96P40200 585 aa2.97□□□□□ -1.93
CPSF6-207ENST00000551516 HK2P52789 917 aa2.97□□□□□ -1.93
CPSF6-207ENST00000551516 INHBEP58166 350 aa2.97□□□□□ -1.93
CPSF6-207ENST00000551516 LACTBP83111 547 aaPredicted RBP2.97□□□□□ -1.93
CPSF6-207ENST00000551516 DSG1Q02413 1049 aa2.97□□□□□ -1.93
CPSF6-207ENST00000551516 CHRNDQ07001 517 aa2.97□□□□□ -1.93
CPSF6-207ENST00000551516 ITKQ08881 620 aa2.97□□□□□ -1.93
CPSF6-207ENST00000551516 GRM1Q13255 1194 aa2.97□□□□□ -1.93
CPSF6-207ENST00000551516 ZNF174Q15697 407 aa2.97□□□□□ -1.93
CPSF6-207ENST00000551516 GPR19Q15760 415 aa2.97□□□□□ -1.93
CPSF6-207ENST00000551516 HSF5Q4G112 596 aaPredicted RBP2.97□□□□□ -1.93
CPSF6-207ENST00000551516 ODR4Q5SWX8 454 aa2.97□□□□□ -1.93
CPSF6-207ENST00000551516 MROH9Q5TGP6 573 aa2.97□□□□□ -1.93
CPSF6-207ENST00000551516 TTLL5Q6EMB2 1281 aa2.97□□□□□ -1.93
CPSF6-207ENST00000551516 SLCO6A1Q86UG4 719 aa2.97□□□□□ -1.93
CPSF6-207ENST00000551516 CABP7Q86V35 215 aa2.97□□□□□ -1.93
CPSF6-207ENST00000551516 VSIG10LQ86VR7 867 aa2.97□□□□□ -1.93
CPSF6-207ENST00000551516 TEX2Q8IWB9 1127 aa2.97□□□□□ -1.93
CPSF6-207ENST00000551516 NLGN4XQ8N0W4 816 aa2.97□□□□□ -1.93
CPSF6-207ENST00000551516 CISD2Q8N5K1 135 aaKnown RBP2.97□□□□□ -1.93
CPSF6-207ENST00000551516 LZTR1Q8N653 840 aa2.97□□□□□ -1.93
CPSF6-207ENST00000551516 ANKRD44Q8N8A2 993 aa2.97□□□□□ -1.93
CPSF6-207ENST00000551516 PDZD8Q8NEN9 1154 aa2.97□□□□□ -1.93
CPSF6-207ENST00000551516 FLCNQ8NFG4 579 aa2.97□□□□□ -1.93
CPSF6-207ENST00000551516 NUP43Q8NFH3 380 aa2.97□□□□□ -1.93
CPSF6-207ENST00000551516 CD99L2Q8TCZ2 262 aa2.97□□□□□ -1.93
CPSF6-207ENST00000551516 RUNDC1Q96C34 613 aa2.97□□□□□ -1.93
CPSF6-207ENST00000551516 ASIC4Q96FT7 647 aa2.97□□□□□ -1.93
CPSF6-207ENST00000551516 CFAP53Q96M91 514 aa2.97□□□□□ -1.93
CPSF6-207ENST00000551516 EYA3Q99504 573 aa2.97□□□□□ -1.93
CPSF6-207ENST00000551516 GDF15Q99988 308 aa2.97□□□□□ -1.93
CPSF6-207ENST00000551516 G6PC3Q9BUM1 346 aa2.97□□□□□ -1.93
CPSF6-207ENST00000551516 PUS7LQ9H0K6 701 aaKnown RBP2.97□□□□□ -1.93
CPSF6-207ENST00000551516 EPB41L1Q9H4G0 881 aa2.97□□□□□ -1.93
CPSF6-207ENST00000551516 THG1LQ9NWX6 298 aaKnown RBP2.97□□□□□ -1.93
CPSF6-207ENST00000551516 CCDC39Q9UFE4 941 aa2.97□□□□□ -1.93
CPSF6-207ENST00000551516 TCEAL9Q9UHQ7 104 aa2.97□□□□□ -1.93
CPSF6-207ENST00000551516 FBXL7Q9UJT9 491 aa2.97□□□□□ -1.93
CPSF6-207ENST00000551516 G3BP2Q9UN86 482 aaKnown RBP2.97□□□□□ -1.93
CPSF6-207ENST00000551516 PPP2R3BQ9Y5P8 575 aa2.97□□□□□ -1.93
CPSF6-207ENST00000551516 X6R8D5 127 aa2.97□□□□□ -1.93
CPSF6-207ENST00000551516 PSME4Q14997 1843 aa2.97□□□□□ -1.93
CPSF6-207ENST00000551516 DLG5Q8TDM6 1919 aa2.97□□□□□ -1.93
CPSF6-207ENST00000551516 REV3LO60673 3130 aa2.97□□□□□ -1.93
CPSF6-207ENST00000551516 COL1A1P02452 1464 aaPredicted RBP2.96□□□□□ -1.93
CPSF6-207ENST00000551516 NEMP1O14524 444 aa2.96□□□□□ -1.94
CPSF6-207ENST00000551516 PPP1R11O60927 126 aaPredicted RBP2.96□□□□□ -1.94
CPSF6-207ENST00000551516 HIP1RO75146 1068 aa2.96□□□□□ -1.94
CPSF6-207ENST00000551516 KATNA1O75449 491 aa2.96□□□□□ -1.94
CPSF6-207ENST00000551516 ALDH1L1O75891 902 aa2.96□□□□□ -1.94
CPSF6-207ENST00000551516 PRNPP04156 253 aa2.96□□□□□ -1.94
CPSF6-207ENST00000551516 COL6A2P12110 1019 aa2.96□□□□□ -1.94
CPSF6-207ENST00000551516 RAC2P15153 192 aa2.96□□□□□ -1.94
CPSF6-207ENST00000551516 PDE6AP16499 860 aa2.96□□□□□ -1.94
CPSF6-207ENST00000551516 PRKCAP17252 672 aa2.96□□□□□ -1.94
CPSF6-207ENST00000551516 KRT15P19012 456 aa2.96□□□□□ -1.94
CPSF6-207ENST00000551516 ARL4AP40617 200 aa2.96□□□□□ -1.94
CPSF6-207ENST00000551516 ADCYAP1R1P41586 468 aa2.96□□□□□ -1.94
CPSF6-207ENST00000551516 ID4P47928 161 aa2.96□□□□□ -1.94
CPSF6-207ENST00000551516 LSSP48449 732 aa2.96□□□□□ -1.94
CPSF6-207ENST00000551516 MECP2P51608 486 aaKnown RBP2.96□□□□□ -1.94
CPSF6-207ENST00000551516 CYP4F8P98187 520 aa2.96□□□□□ -1.94
CPSF6-207ENST00000551516 VGLL4Q14135 290 aa2.96□□□□□ -1.94
CPSF6-207ENST00000551516 RRP1BQ14684 758 aaKnown RBP2.96□□□□□ -1.94
CPSF6-207ENST00000551516 RALBP1Q15311 655 aa2.96□□□□□ -1.94
CPSF6-207ENST00000551516 SKOR2Q2VWA4 1001 aaPredicted RBP2.96□□□□□ -1.94
CPSF6-207ENST00000551516 ATP13A4Q4VNC1 1196 aa2.96□□□□□ -1.94
CPSF6-207ENST00000551516 MAP3K21Q5TCX8 1036 aa2.96□□□□□ -1.94
CPSF6-207ENST00000551516 SLC23A3Q6PIS1 610 aa2.96□□□□□ -1.94
CPSF6-207ENST00000551516 ZNF574Q6ZN55 896 aaPredicted RBP2.96□□□□□ -1.94
CPSF6-207ENST00000551516 ARHGAP36Q6ZRI8 547 aa2.96□□□□□ -1.94
CPSF6-207ENST00000551516 OTOP3Q7RTS5 596 aa2.96□□□□□ -1.94
CPSF6-207ENST00000551516 SPRED2Q7Z698 418 aa2.96□□□□□ -1.94
CPSF6-207ENST00000551516 OSTM1Q86WC4 334 aa2.96□□□□□ -1.94
CPSF6-207ENST00000551516 DTX1Q86Y01 620 aa2.96□□□□□ -1.94
CPSF6-207ENST00000551516 RIOX2Q8IUF8 465 aa2.96□□□□□ -1.94
CPSF6-207ENST00000551516 ZFPM1Q8IX07 1006 aa2.96□□□□□ -1.94
CPSF6-207ENST00000551516 TP53INP2Q8IXH6 220 aa2.96□□□□□ -1.94
CPSF6-207ENST00000551516 CCDC146Q8IYE0 955 aa2.96□□□□□ -1.94
CPSF6-207ENST00000551516 LILRA2Q8N149 483 aa2.96□□□□□ -1.94
CPSF6-207ENST00000551516 Q8N1Y9 231 aa2.96□□□□□ -1.94
CPSF6-207ENST00000551516 AGBL5Q8NDL9 886 aa2.96□□□□□ -1.94
CPSF6-207ENST00000551516 PLEKHO2Q8TD55 490 aa2.96□□□□□ -1.94
CPSF6-207ENST00000551516 CHTF18Q8WVB6 975 aa2.96□□□□□ -1.94
CPSF6-207ENST00000551516 MTMR8Q96EF0 704 aa2.96□□□□□ -1.94
CPSF6-207ENST00000551516 MYD88Q99836 296 aa2.96□□□□□ -1.94
CPSF6-207ENST00000551516 BOCQ9BWV1 1114 aa2.96□□□□□ -1.94
CPSF6-207ENST00000551516 PUS3Q9BZE2 481 aaKnown RBP2.96□□□□□ -1.94
CPSF6-207ENST00000551516 CDIP1Q9H305 208 aa2.96□□□□□ -1.94
CPSF6-207ENST00000551516 PRKRIP1Q9H875 184 aaPredicted RBP2.96□□□□□ -1.94
CPSF6-207ENST00000551516 ZCCHC17Q9NP64 241 aaKnown RBP2.96□□□□□ -1.94
CPSF6-207ENST00000551516 SLC6A20Q9NP91 592 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms