RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 MAP2K1Q02750 393 aaPredicted RBP21.41■■□□□ 1.02
SSH1-209ENST00000551165 CYP24A1Q07973 514 aa21.41■■□□□ 1.02
SSH1-209ENST00000551165 MAPK8IP2Q13387 824 aaPredicted RBP21.41■■□□□ 1.02
SSH1-209ENST00000551165 ASIC2Q16515 512 aa21.41■■□□□ 1.02
SSH1-209ENST00000551165 SLC9C1Q4G0N8 1177 aa21.41■■□□□ 1.02
SSH1-209ENST00000551165 KIAA1328Q86T90 577 aa21.41■■□□□ 1.02
SSH1-209ENST00000551165 OR6J1Q8NGC5 347 aa21.41■■□□□ 1.02
SSH1-209ENST00000551165 PSPC1Q8WXF1 523 aaKnown RBP21.41■■□□□ 1.02
SSH1-209ENST00000551165 NUCKS1Q9H1E3 243 aaKnown RBP21.41■■□□□ 1.02
SSH1-209ENST00000551165 GPBP1L1Q9HC44 474 aaPredicted RBP21.41■■□□□ 1.02
SSH1-209ENST00000551165 ZCCHC17Q9NP64 241 aaKnown RBP21.41■■□□□ 1.02
SSH1-209ENST00000551165 DNAJC12Q9UKB3 198 aa21.41■■□□□ 1.02
SSH1-209ENST00000551165 ZNF236Q9UL36 1845 aa21.41■■□□□ 1.02
SSH1-209ENST00000551165 KRT83P78385 493 aa21.4■■□□□ 1.02
SSH1-209ENST00000551165 SLC35F6Q8N357 371 aa21.4■■□□□ 1.02
SSH1-209ENST00000551165 EHBP1Q8NDI1 1231 aa21.4■■□□□ 1.02
SSH1-209ENST00000551165 USP6NLQ92738 828 aa21.4■■□□□ 1.02
SSH1-209ENST00000551165 PPP1R16BQ96T49 567 aa21.4■■□□□ 1.02
SSH1-209ENST00000551165 GPR88Q9GZN0 384 aa21.4■■□□□ 1.02
SSH1-209ENST00000551165 PCDHA13Q9Y5I0 950 aa21.4■■□□□ 1.02
SSH1-209ENST00000551165 STYXL1Q9Y6J8 313 aa21.4■■□□□ 1.02
SSH1-209ENST00000551165 MMP3P08254 477 aa21.4■■□□□ 1.02
SSH1-209ENST00000551165 DLATP10515 647 aaKnown RBP21.4■■□□□ 1.02
SSH1-209ENST00000551165 CASQ1P31415 396 aa21.4■■□□□ 1.02
SSH1-209ENST00000551165 PTK2Q05397 1052 aa21.4■■□□□ 1.02
SSH1-209ENST00000551165 KLHL30Q0D2K2 578 aa21.4■■□□□ 1.02
SSH1-209ENST00000551165 EPC2Q52LR7 807 aa21.4■■□□□ 1.02
SSH1-209ENST00000551165 CCDC122Q5T0U0 273 aa21.4■■□□□ 1.02
SSH1-209ENST00000551165 CRELD2Q6UXH1 353 aaPredicted RBP21.4■■□□□ 1.02
SSH1-209ENST00000551165 ARHGEF19Q8IW93 802 aa21.4■■□□□ 1.02
SSH1-209ENST00000551165 LRRN4CLQ8ND94 238 aa21.4■■□□□ 1.02
SSH1-209ENST00000551165 SEMA4DQ92854 862 aa21.4■■□□□ 1.02
SSH1-209ENST00000551165 KCNN1Q92952 543 aa21.4■■□□□ 1.02
SSH1-209ENST00000551165 JAKMIP2Q96AA8 810 aa21.4■■□□□ 1.02
SSH1-209ENST00000551165 NLRP4Q96MN2 994 aa21.4■■□□□ 1.02
SSH1-209ENST00000551165 CCDC113Q9H0I3 377 aa21.4■■□□□ 1.02
SSH1-209ENST00000551165 TMEM134Q9H6X4 195 aa21.4■■□□□ 1.02
SSH1-209ENST00000551165 FBXL5Q9UKA1 691 aa21.4■■□□□ 1.02
SSH1-209ENST00000551165 KIF5CO60282 957 aa21.39■■□□□ 1.02
SSH1-209ENST00000551165 MSCO60682 206 aa21.39■■□□□ 1.02
SSH1-209ENST00000551165 LCA5LO95447 670 aa21.39■■□□□ 1.02
SSH1-209ENST00000551165 TUBB4AP04350 444 aa21.39■■□□□ 1.02
SSH1-209ENST00000551165 KLRC1P26715 233 aa21.39■■□□□ 1.02
SSH1-209ENST00000551165 MCCD1P59942 119 aaPredicted RBP21.39■■□□□ 1.02
SSH1-209ENST00000551165 TNFAIP2Q03169 654 aa21.39■■□□□ 1.02
SSH1-209ENST00000551165 LMBRD2Q68DH5 695 aaPredicted RBP21.39■■□□□ 1.02
SSH1-209ENST00000551165 KCNG1Q9UIX4 513 aa21.39■■□□□ 1.02
SSH1-209ENST00000551165 GJD2Q9UKL4 321 aa21.39■■□□□ 1.02
SSH1-209ENST00000551165 AGO2Q9UKV8 859 aaKnown RBP21.39■■□□□ 1.02
SSH1-209ENST00000551165 PPME1Q9Y570 386 aa21.39■■□□□ 1.02
SSH1-209ENST00000551165 A0A087X0T9 212 aa21.39■■□□□ 1.01
SSH1-209ENST00000551165 SSU72P8A0A1W2PR75 194 aa21.39■■□□□ 1.01
SSH1-209ENST00000551165 H3BRB1 525 aa21.39■■□□□ 1.01
SSH1-209ENST00000551165 DYNC1LI2O43237 492 aaPredicted RBP21.39■■□□□ 1.01
SSH1-209ENST00000551165 PPFIA4O75335 1185 aa21.39■■□□□ 1.01
SSH1-209ENST00000551165 URI1O94763 535 aaPredicted RBP21.39■■□□□ 1.01
SSH1-209ENST00000551165 PIGRP01833 764 aa21.39■■□□□ 1.01
SSH1-209ENST00000551165 FAM228BP0C875 321 aa21.39■■□□□ 1.01
SSH1-209ENST00000551165 HARSP12081 509 aaKnown RBP21.39■■□□□ 1.01
SSH1-209ENST00000551165 MXI1P50539 228 aa21.39■■□□□ 1.01
SSH1-209ENST00000551165 OLFML2BQ68BL8 750 aa21.39■■□□□ 1.01
SSH1-209ENST00000551165 IQSEC1Q6DN90 963 aa21.39■■□□□ 1.01
SSH1-209ENST00000551165 CYP4F22Q6NT55 531 aa21.39■■□□□ 1.01
SSH1-209ENST00000551165 ZNF571Q7Z3V5 609 aaPredicted RBP21.39■■□□□ 1.01
SSH1-209ENST00000551165 DNAAF5Q86Y56 855 aa21.39■■□□□ 1.01
SSH1-209ENST00000551165 TCP11Q8WWU5 503 aa21.39■■□□□ 1.01
SSH1-209ENST00000551165 TUT1Q9H6E5 874 aaKnown RBP21.39■■□□□ 1.01
SSH1-209ENST00000551165 ZFYVE28Q9HCC9 887 aa21.39■■□□□ 1.01
SSH1-209ENST00000551165 APEX2Q9UBZ4 518 aa21.39■■□□□ 1.01
SSH1-209ENST00000551165 CSDE1O75534 798 aaKnown RBP21.38■■□□□ 1.01
SSH1-209ENST00000551165 GFPT2O94808 682 aa21.38■■□□□ 1.01
SSH1-209ENST00000551165 INHBEP58166 350 aa21.38■■□□□ 1.01
SSH1-209ENST00000551165 NAA30Q147X3 362 aaPredicted RBP21.38■■□□□ 1.01
SSH1-209ENST00000551165 DRAP1Q14919 205 aaPredicted RBP21.38■■□□□ 1.01
SSH1-209ENST00000551165 SPA17Q15506 151 aa21.38■■□□□ 1.01
SSH1-209ENST00000551165 ARHGAP44Q17R89 818 aa21.38■■□□□ 1.01
SSH1-209ENST00000551165 CDCA2Q69YH5 1023 aaPredicted RBP21.38■■□□□ 1.01
SSH1-209ENST00000551165 PAXIP1Q6ZW49 1069 aaPredicted RBP21.38■■□□□ 1.01
SSH1-209ENST00000551165 KAT5Q92993 513 aa21.38■■□□□ 1.01
SSH1-209ENST00000551165 IFIH1Q9BYX4 1025 aaKnown RBP21.38■■□□□ 1.01
SSH1-209ENST00000551165 MINDY3Q9H8M7 445 aa21.38■■□□□ 1.01
SSH1-209ENST00000551165 SLC5A4Q9NY91 659 aa21.38■■□□□ 1.01
SSH1-209ENST00000551165 ADAMTS1Q9UHI8 967 aa21.38■■□□□ 1.01
SSH1-209ENST00000551165 EXTL3O43909 919 aa21.38■■□□□ 1.01
SSH1-209ENST00000551165 ZNF865P0CJ78 1059 aaPredicted RBP21.38■■□□□ 1.01
SSH1-209ENST00000551165 VAV2P52735 878 aa21.38■■□□□ 1.01
SSH1-209ENST00000551165 MXD4Q14582 209 aaPredicted RBP21.38■■□□□ 1.01
SSH1-209ENST00000551165 ZNF516Q92618 1163 aa21.38■■□□□ 1.01
SSH1-209ENST00000551165 ARHGAP39Q9C0H5 1083 aa21.38■■□□□ 1.01
SSH1-209ENST00000551165 L2HGDHQ9H9P8 463 aa21.38■■□□□ 1.01
SSH1-209ENST00000551165 ZSWIM8A7E2V4 1837 aa21.37■■□□□ 1.01
SSH1-209ENST00000551165 A0A0B4J269 797 aa21.37■■□□□ 1.01
SSH1-209ENST00000551165 F8VZ95 297 aa21.37■■□□□ 1.01
SSH1-209ENST00000551165 IPO7O95373 1038 aaKnown RBP21.37■■□□□ 1.01
SSH1-209ENST00000551165 HOXC6P09630 235 aa21.37■■□□□ 1.01
SSH1-209ENST00000551165 IQCF3P0C7M6 154 aa21.37■■□□□ 1.01
SSH1-209ENST00000551165 MATR3P43243 847 aaKnown RBP eCLIP21.37■■□□□ 1.01
SSH1-209ENST00000551165 CHMP4BP1P59074 171 aa21.37■■□□□ 1.01
SSH1-209ENST00000551165 CCDC102AQ96A19 550 aa21.37■■□□□ 1.01
SSH1-209ENST00000551165 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms