RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 KLHL23Q8NBE8 558 aa16.99■□□□□ 0.31
PRPF40B-211ENST00000551063 COLGALT1Q8NBJ5 622 aa16.99■□□□□ 0.31
PRPF40B-211ENST00000551063 URGCPQ8TCY9 931 aa16.99■□□□□ 0.31
PRPF40B-211ENST00000551063 KCNN1Q92952 543 aa16.99■□□□□ 0.31
PRPF40B-211ENST00000551063 NTPCRQ9BSD7 190 aaKnown RBP16.99■□□□□ 0.31
PRPF40B-211ENST00000551063 TMEM134Q9H6X4 195 aa16.99■□□□□ 0.31
PRPF40B-211ENST00000551063 LARSQ9P2J5 1176 aaKnown RBP16.99■□□□□ 0.31
PRPF40B-211ENST00000551063 HCSTQ9UBK5 93 aa16.99■□□□□ 0.31
PRPF40B-211ENST00000551063 CFAP45Q9UL16 551 aa16.99■□□□□ 0.31
PRPF40B-211ENST00000551063 PLAGL2Q9UPG8 496 aa16.99■□□□□ 0.31
PRPF40B-211ENST00000551063 SPTBN5Q9NRC6 3674 aaKnown RBP16.99■□□□□ 0.31
PRPF40B-211ENST00000551063 GRM6O15303 877 aa16.98■□□□□ 0.31
PRPF40B-211ENST00000551063 INPPL1O15357 1258 aa16.98■□□□□ 0.31
PRPF40B-211ENST00000551063 CUTAO60888 179 aa16.98■□□□□ 0.31
PRPF40B-211ENST00000551063 ITGB1P05556 798 aa16.98■□□□□ 0.31
PRPF40B-211ENST00000551063 ITGA4P13612 1032 aa16.98■□□□□ 0.31
PRPF40B-211ENST00000551063 SMTNP53814 917 aa16.98■□□□□ 0.31
PRPF40B-211ENST00000551063 TFF2Q03403 129 aa16.98■□□□□ 0.31
PRPF40B-211ENST00000551063 RAD51AP2Q09MP3 1159 aa16.98■□□□□ 0.31
PRPF40B-211ENST00000551063 TMEM132AQ24JP5 1023 aa16.98■□□□□ 0.31
PRPF40B-211ENST00000551063 RRAGBQ5VZM2 374 aa16.98■□□□□ 0.31
PRPF40B-211ENST00000551063 HLA-CQ95604 372 aa16.98■□□□□ 0.31
PRPF40B-211ENST00000551063 ZNF558Q96NG5 402 aa16.98■□□□□ 0.31
PRPF40B-211ENST00000551063 REEP2Q9BRK0 252 aa16.98■□□□□ 0.31
PRPF40B-211ENST00000551063 ADPGKQ9BRR6 497 aa16.98■□□□□ 0.31
PRPF40B-211ENST00000551063 PDZD7Q9H5P4 517 aa16.98■□□□□ 0.31
PRPF40B-211ENST00000551063 TBC1D13Q9NVG8 400 aa16.98■□□□□ 0.31
PRPF40B-211ENST00000551063 KANSL3Q9P2N6 904 aa16.98■□□□□ 0.31
PRPF40B-211ENST00000551063 H0YCG3 227 aa16.97■□□□□ 0.31
PRPF40B-211ENST00000551063 K7ERI5 159 aa16.97■□□□□ 0.31
PRPF40B-211ENST00000551063 NPTXRO95502 500 aa16.97■□□□□ 0.31
PRPF40B-211ENST00000551063 EDN1P05305 212 aa16.97■□□□□ 0.31
PRPF40B-211ENST00000551063 LIG1P18858 919 aa16.97■□□□□ 0.31
PRPF40B-211ENST00000551063 SCP2P22307 547 aa16.97■□□□□ 0.31
PRPF40B-211ENST00000551063 ZNF131P52739 623 aa16.97■□□□□ 0.31
PRPF40B-211ENST00000551063 PLCB3Q01970 1234 aa16.97■□□□□ 0.31
PRPF40B-211ENST00000551063 DCAF4L1Q3SXM0 396 aa16.97■□□□□ 0.31
PRPF40B-211ENST00000551063 FOXD4L6Q3SYB3 417 aaPredicted RBP16.97■□□□□ 0.31
PRPF40B-211ENST00000551063 LONRF3Q496Y0 759 aa16.97■□□□□ 0.31
PRPF40B-211ENST00000551063 KCNT2Q6UVM3 1135 aa16.97■□□□□ 0.31
PRPF40B-211ENST00000551063 FOXD4L3Q6VB84 417 aaPredicted RBP16.97■□□□□ 0.31
PRPF40B-211ENST00000551063 APBB1IPQ7Z5R6 666 aaPredicted RBP16.97■□□□□ 0.31
PRPF40B-211ENST00000551063 THNSL1Q8IYQ7 743 aa16.97■□□□□ 0.31
PRPF40B-211ENST00000551063 SPPL3Q8TCT6 385 aa16.97■□□□□ 0.31
PRPF40B-211ENST00000551063 NXF3Q9H4D5 531 aaKnown RBP16.97■□□□□ 0.31
PRPF40B-211ENST00000551063 PARVGQ9HBI0 331 aa16.97■□□□□ 0.31
PRPF40B-211ENST00000551063 ALG13Q9NP73 1137 aaKnown RBP16.97■□□□□ 0.31
PRPF40B-211ENST00000551063 TNFSF13BQ9Y275 285 aa16.97■□□□□ 0.31
PRPF40B-211ENST00000551063 INPP5FQ9Y2H2 1132 aa16.97■□□□□ 0.31
PRPF40B-211ENST00000551063 GIT1Q9Y2X7 761 aa16.97■□□□□ 0.31
PRPF40B-211ENST00000551063 ZDHHC9Q9Y397 364 aa16.97■□□□□ 0.31
PRPF40B-211ENST00000551063 FNDC1Q4ZHG4 1894 aaPredicted RBP16.97■□□□□ 0.31
PRPF40B-211ENST00000551063 NPHP3-ACAD11A0A0J9YXS1 232 aa16.96■□□□□ 0.31
PRPF40B-211ENST00000551063 TTLL13PA6NNM8 815 aa16.96■□□□□ 0.31
PRPF40B-211ENST00000551063 SFI1A8K8P3 1242 aa16.96■□□□□ 0.31
PRPF40B-211ENST00000551063 SLC16A4O15374 487 aa16.96■□□□□ 0.31
PRPF40B-211ENST00000551063 TBCAO75347 108 aaKnown RBP16.96■□□□□ 0.31
PRPF40B-211ENST00000551063 FGF18O76093 207 aa16.96■□□□□ 0.31
PRPF40B-211ENST00000551063 FAM13AO94988 1023 aa16.96■□□□□ 0.31
PRPF40B-211ENST00000551063 KRT18P05783 430 aaKnown RBP16.96■□□□□ 0.31
PRPF40B-211ENST00000551063 NCKAP1LP55160 1127 aa16.96■□□□□ 0.31
PRPF40B-211ENST00000551063 CACNB1Q02641 598 aaPredicted RBP16.96■□□□□ 0.31
PRPF40B-211ENST00000551063 DNM1Q05193 864 aaKnown RBP16.96■□□□□ 0.31
PRPF40B-211ENST00000551063 DHX8Q14562 1220 aaKnown RBP16.96■□□□□ 0.31
PRPF40B-211ENST00000551063 TAS1R3Q7RTX0 852 aa16.96■□□□□ 0.31
PRPF40B-211ENST00000551063 CDR2LQ86X02 465 aaPredicted RBP16.96■□□□□ 0.31
PRPF40B-211ENST00000551063 TMEM161BQ8NDZ6 487 aa16.96■□□□□ 0.31
PRPF40B-211ENST00000551063 POF1BQ8WVV4 589 aa16.96■□□□□ 0.31
PRPF40B-211ENST00000551063 MRPL4Q9BYD3 311 aaKnown RBP16.96■□□□□ 0.31
PRPF40B-211ENST00000551063 NSUN3Q9H649 340 aaKnown RBP16.96■□□□□ 0.31
PRPF40B-211ENST00000551063 LZTS1Q9Y250 596 aa16.96■□□□□ 0.31
PRPF40B-211ENST00000551063 HES2Q9Y543 173 aa16.96■□□□□ 0.31
PRPF40B-211ENST00000551063 ATP6V1DQ9Y5K8 247 aa16.96■□□□□ 0.31
PRPF40B-211ENST00000551063 NLRC5Q86WI3 1866 aa16.95■□□□□ 0.3
PRPF40B-211ENST00000551063 MLH1P40692 756 aa16.95■□□□□ 0.3
PRPF40B-211ENST00000551063 STAT6P42226 847 aa16.95■□□□□ 0.3
PRPF40B-211ENST00000551063 KCNQ1P51787 676 aa16.95■□□□□ 0.3
PRPF40B-211ENST00000551063 RNASELQ05823 741 aaKnown RBP16.95■□□□□ 0.3
PRPF40B-211ENST00000551063 CAMK1Q14012 370 aa16.95■□□□□ 0.3
PRPF40B-211ENST00000551063 GIT2Q14161 759 aa16.95■□□□□ 0.3
PRPF40B-211ENST00000551063 AXDND1Q5T1B0 1012 aaPredicted RBP16.95■□□□□ 0.3
PRPF40B-211ENST00000551063 NT5DC1Q5TFE4 455 aa16.95■□□□□ 0.3
PRPF40B-211ENST00000551063 ATF7IP2Q5U623 682 aa16.95■□□□□ 0.3
PRPF40B-211ENST00000551063 EEF1DP3Q658K8 133 aa16.95■□□□□ 0.3
PRPF40B-211ENST00000551063 SV2BQ7L1I2 683 aa16.95■□□□□ 0.3
PRPF40B-211ENST00000551063 SLC39A11Q8N1S5 342 aa16.95■□□□□ 0.3
PRPF40B-211ENST00000551063 TMEM175Q9BSA9 504 aa16.95■□□□□ 0.3
PRPF40B-211ENST00000551063 APOL6Q9BWW8 343 aa16.95■□□□□ 0.3
PRPF40B-211ENST00000551063 RNF39Q9H2S5 420 aa16.95■□□□□ 0.3
PRPF40B-211ENST00000551063 NRDE2Q9H7Z3 1164 aa16.95■□□□□ 0.3
PRPF40B-211ENST00000551063 SPG21Q9NZD8 308 aa16.95■□□□□ 0.3
PRPF40B-211ENST00000551063 RCOR1Q9UKL0 485 aa16.95■□□□□ 0.3
PRPF40B-211ENST00000551063 TRANK1O15050 2925 aa16.95■□□□□ 0.3
PRPF40B-211ENST00000551063 A0A087X0B3 334 aa16.94■□□□□ 0.3
PRPF40B-211ENST00000551063 ARL5CA6NH57 179 aa16.94■□□□□ 0.3
PRPF40B-211ENST00000551063 ZC3H11AO75152 810 aaKnown RBP eCLIP16.94■□□□□ 0.3
PRPF40B-211ENST00000551063 MAPTP10636 758 aaKnown RBP16.94■□□□□ 0.3
PRPF40B-211ENST00000551063 ABCD1P33897 745 aa16.94■□□□□ 0.3
PRPF40B-211ENST00000551063 ME1P48163 572 aa16.94■□□□□ 0.3
PRPF40B-211ENST00000551063 ALDH7A1P49419 539 aaKnown RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms