RNA–Protein interactions for RNA: ENST00000550767.5

TUBA1A-207, Transcript of tubulin alpha 1a, humanhuman

TSL 1 (best) BASIC

Gene TUBA1A, Length 1,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1A-207ENST00000550767 A0A1B0GUA9 196 aa13.16□□□□□ -0.3
TUBA1A-207ENST00000550767 LCHNA4D1U4 455 aa13.16□□□□□ -0.3
TUBA1A-207ENST00000550767 N4BP3O15049 544 aa13.16□□□□□ -0.3
TUBA1A-207ENST00000550767 HOXA2O43364 376 aa13.16□□□□□ -0.3
TUBA1A-207ENST00000550767 ACTN4O43707 911 aaKnown RBP13.16□□□□□ -0.3
TUBA1A-207ENST00000550767 EOMESO95936 686 aa13.16□□□□□ -0.3
TUBA1A-207ENST00000550767 SLFN14P0C7P3 912 aa13.16□□□□□ -0.3
TUBA1A-207ENST00000550767 MAPTP10636 758 aaKnown RBP13.16□□□□□ -0.3
TUBA1A-207ENST00000550767 POU3F3P20264 500 aaPredicted RBP13.16□□□□□ -0.3
TUBA1A-207ENST00000550767 SCP2P22307 547 aa13.16□□□□□ -0.3
TUBA1A-207ENST00000550767 ABCD1P33897 745 aa13.16□□□□□ -0.3
TUBA1A-207ENST00000550767 ASIC1P78348 528 aa13.16□□□□□ -0.3
TUBA1A-207ENST00000550767 UBXN11Q5T124 520 aa13.16□□□□□ -0.3
TUBA1A-207ENST00000550767 SLC27A1Q6PCB7 646 aa13.16□□□□□ -0.3
TUBA1A-207ENST00000550767 HAUS6Q7Z4H7 955 aa13.16□□□□□ -0.3
TUBA1A-207ENST00000550767 CDR2LQ86X02 465 aaPredicted RBP13.16□□□□□ -0.3
TUBA1A-207ENST00000550767 SFR1Q86XK3 245 aa13.16□□□□□ -0.3
TUBA1A-207ENST00000550767 CCDC65Q8IXS2 484 aa13.16□□□□□ -0.3
TUBA1A-207ENST00000550767 SP7Q8TDD2 431 aaPredicted RBP13.16□□□□□ -0.3
TUBA1A-207ENST00000550767 ADPGKQ9BRR6 497 aa13.16□□□□□ -0.3
TUBA1A-207ENST00000550767 MRPL4Q9BYD3 311 aaKnown RBP13.16□□□□□ -0.3
TUBA1A-207ENST00000550767 PANK4Q9NVE7 773 aa13.16□□□□□ -0.3
TUBA1A-207ENST00000550767 PCDHB2Q9Y5E7 798 aa13.16□□□□□ -0.3
TUBA1A-207ENST00000550767 TTC28Q96AY4 2481 aa13.16□□□□□ -0.3
TUBA1A-207ENST00000550767 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.15□□□□□ -0.3
TUBA1A-207ENST00000550767 FRMD3A2A2Y4 597 aa13.15□□□□□ -0.3
TUBA1A-207ENST00000550767 TTLL13PA6NNM8 815 aa13.15□□□□□ -0.3
TUBA1A-207ENST00000550767 ZNF623O75123 536 aa13.15□□□□□ -0.3
TUBA1A-207ENST00000550767 EDN1P05305 212 aa13.15□□□□□ -0.3
TUBA1A-207ENST00000550767 FGFR1P11362 822 aa13.15□□□□□ -0.3
TUBA1A-207ENST00000550767 ATF7P17544 494 aaPredicted RBP13.15□□□□□ -0.3
TUBA1A-207ENST00000550767 AFMP43652 599 aa13.15□□□□□ -0.3
TUBA1A-207ENST00000550767 BTG3Q14201 252 aaPredicted RBP13.15□□□□□ -0.3
TUBA1A-207ENST00000550767 CCDC85BQ15834 202 aaPredicted RBP13.15□□□□□ -0.3
TUBA1A-207ENST00000550767 LONRF3Q496Y0 759 aa13.15□□□□□ -0.3
TUBA1A-207ENST00000550767 ATF7IP2Q5U623 682 aa13.15□□□□□ -0.3
TUBA1A-207ENST00000550767 CNNM4Q6P4Q7 775 aa13.15□□□□□ -0.3
TUBA1A-207ENST00000550767 TAS1R3Q7RTX0 852 aa13.15□□□□□ -0.3
TUBA1A-207ENST00000550767 ZNF598Q86UK7 904 aaKnown RBP13.15□□□□□ -0.3
TUBA1A-207ENST00000550767 HACE1Q8IYU2 909 aa13.15□□□□□ -0.3
TUBA1A-207ENST00000550767 ABI1Q8IZP0 508 aa13.15□□□□□ -0.3
TUBA1A-207ENST00000550767 CNNM3Q8NE01 707 aa13.15□□□□□ -0.3
TUBA1A-207ENST00000550767 ATXN2LQ8WWM7 1075 aaKnown RBP13.15□□□□□ -0.3
TUBA1A-207ENST00000550767 KCNN1Q92952 543 aa13.15□□□□□ -0.3
TUBA1A-207ENST00000550767 ZNF689Q96CS4 500 aaPredicted RBP13.15□□□□□ -0.3
TUBA1A-207ENST00000550767 PGBD4Q96DM1 585 aa13.15□□□□□ -0.3
TUBA1A-207ENST00000550767 FIZ1Q96SL8 496 aa13.15□□□□□ -0.3
TUBA1A-207ENST00000550767 C7orf25Q9BPX7 421 aa13.15□□□□□ -0.3
TUBA1A-207ENST00000550767 EIF2AQ9BY44 585 aaKnown RBP13.15□□□□□ -0.3
TUBA1A-207ENST00000550767 PDZD7Q9H5P4 517 aa13.15□□□□□ -0.3
TUBA1A-207ENST00000550767 CERS4Q9HA82 394 aa13.15□□□□□ -0.3
TUBA1A-207ENST00000550767 RC3H2Q9HBD1 1191 aaKnown RBP13.15□□□□□ -0.3
TUBA1A-207ENST00000550767 OLFML3Q9NRN5 406 aa13.15□□□□□ -0.3
TUBA1A-207ENST00000550767 USP20Q9Y2K6 914 aa13.15□□□□□ -0.3
TUBA1A-207ENST00000550767 CITO14578 2027 aa13.15□□□□□ -0.3
TUBA1A-207ENST00000550767 LINC01553A4QN01 128 aa13.14□□□□□ -0.31
TUBA1A-207ENST00000550767 ARHGEF15O94989 841 aa13.14□□□□□ -0.31
TUBA1A-207ENST00000550767 NPTXRO95502 500 aa13.14□□□□□ -0.31
TUBA1A-207ENST00000550767 NMT1P30419 496 aaKnown RBP13.14□□□□□ -0.31
TUBA1A-207ENST00000550767 GATMP50440 423 aa13.14□□□□□ -0.31
TUBA1A-207ENST00000550767 COASYQ13057 564 aa13.14□□□□□ -0.31
TUBA1A-207ENST00000550767 PAN2Q504Q3 1202 aaKnown RBP13.14□□□□□ -0.31
TUBA1A-207ENST00000550767 HERC4Q5GLZ8 1057 aaPredicted RBP13.14□□□□□ -0.31
TUBA1A-207ENST00000550767 TJAP1Q5JTD0 557 aa13.14□□□□□ -0.31
TUBA1A-207ENST00000550767 NT5DC1Q5TFE4 455 aa13.14□□□□□ -0.31
TUBA1A-207ENST00000550767 APBB1IPQ7Z5R6 666 aaPredicted RBP13.14□□□□□ -0.31
TUBA1A-207ENST00000550767 CMTR2Q8IYT2 770 aaKnown RBP13.14□□□□□ -0.31
TUBA1A-207ENST00000550767 FIBCD1Q8N539 461 aa13.14□□□□□ -0.31
TUBA1A-207ENST00000550767 TMEM87AQ8NBN3 555 aa13.14□□□□□ -0.31
TUBA1A-207ENST00000550767 ARNTL2Q8WYA1 636 aa13.14□□□□□ -0.31
TUBA1A-207ENST00000550767 CCDC34Q96HJ3 373 aa13.14□□□□□ -0.31
TUBA1A-207ENST00000550767 TARS2Q9BW92 718 aaKnown RBP13.14□□□□□ -0.31
TUBA1A-207ENST00000550767 BLZF1Q9H2G9 400 aa13.14□□□□□ -0.31
TUBA1A-207ENST00000550767 MRPL44Q9H9J2 332 aaKnown RBP13.14□□□□□ -0.31
TUBA1A-207ENST00000550767 PRDM6Q9NQX0 595 aa13.14□□□□□ -0.31
TUBA1A-207ENST00000550767 THEGQ9P2T0 379 aa13.14□□□□□ -0.31
TUBA1A-207ENST00000550767 IPPQ9Y573 584 aa13.14□□□□□ -0.31
TUBA1A-207ENST00000550767 MTCH2Q9Y6C9 303 aa13.14□□□□□ -0.31
TUBA1A-207ENST00000550767 COL4A4P53420 1690 aaPredicted RBP13.14□□□□□ -0.31
TUBA1A-207ENST00000550767 TRIP11Q15643 1979 aa13.13□□□□□ -0.31
TUBA1A-207ENST00000550767 EPOPA6NHQ4 379 aa13.13□□□□□ -0.31
TUBA1A-207ENST00000550767 TBKBP1A7MCY6 615 aa13.13□□□□□ -0.31
TUBA1A-207ENST00000550767 RFXAPO00287 272 aa13.13□□□□□ -0.31
TUBA1A-207ENST00000550767 GTPBP6O43824 516 aaPredicted RBP13.13□□□□□ -0.31
TUBA1A-207ENST00000550767 ZNF202O95125 648 aa13.13□□□□□ -0.31
TUBA1A-207ENST00000550767 GCNT3O95395 438 aa13.13□□□□□ -0.31
TUBA1A-207ENST00000550767 MYL1P05976 194 aa13.13□□□□□ -0.31
TUBA1A-207ENST00000550767 ITGA4P13612 1032 aa13.13□□□□□ -0.31
TUBA1A-207ENST00000550767 GTF2BQ00403 316 aa13.13□□□□□ -0.31
TUBA1A-207ENST00000550767 DCAF4L1Q3SXM0 396 aa13.13□□□□□ -0.31
TUBA1A-207ENST00000550767 ZNF568Q3ZCX4 644 aa13.13□□□□□ -0.31
TUBA1A-207ENST00000550767 EEF1DP3Q658K8 133 aa13.13□□□□□ -0.31
TUBA1A-207ENST00000550767 GLB1LQ6UWU2 654 aa13.13□□□□□ -0.31
TUBA1A-207ENST00000550767 ZPBP2Q6X784 338 aa13.13□□□□□ -0.31
TUBA1A-207ENST00000550767 KRBA2Q6ZNG9 492 aa13.13□□□□□ -0.31
TUBA1A-207ENST00000550767 UNC13DQ70J99 1090 aa13.13□□□□□ -0.31
TUBA1A-207ENST00000550767 MRPL10Q7Z7H8 261 aaKnown RBP13.13□□□□□ -0.31
TUBA1A-207ENST00000550767 GRAMD1CQ8IYS0 662 aa13.13□□□□□ -0.31
TUBA1A-207ENST00000550767 RSPH1Q8WYR4 309 aa13.13□□□□□ -0.31
TUBA1A-207ENST00000550767 LPPQ93052 612 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms