RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 GBA2Q9HCG7 927 aaPredicted RBP6.72□□□□□ -1.33
SCAF11-213ENST00000550629 TCP11L1Q9NUJ3 509 aa6.72□□□□□ -1.33
SCAF11-213ENST00000550629 SNX14Q9Y5W7 946 aa6.72□□□□□ -1.33
SCAF11-213ENST00000550629 MYH1P12882 1939 aa6.72□□□□□ -1.33
SCAF11-213ENST00000550629 CELF2O95319 508 aaKnown RBP6.71□□□□□ -1.34
SCAF11-213ENST00000550629 TSPY3P0CV98 308 aa6.71□□□□□ -1.34
SCAF11-213ENST00000550629 TSPY8P0CW00 308 aa6.71□□□□□ -1.34
SCAF11-213ENST00000550629 TCF3P15923 654 aa6.71□□□□□ -1.34
SCAF11-213ENST00000550629 MCM5P33992 734 aa6.71□□□□□ -1.34
SCAF11-213ENST00000550629 BUD31P41223 144 aaPredicted RBP6.71□□□□□ -1.34
SCAF11-213ENST00000550629 NOVP48745 357 aa6.71□□□□□ -1.34
SCAF11-213ENST00000550629 SART3Q15020 963 aaKnown RBP6.71□□□□□ -1.34
SCAF11-213ENST00000550629 ABCB5Q2M3G0 1257 aa6.71□□□□□ -1.34
SCAF11-213ENST00000550629 SLC4A8Q2Y0W8 1093 aa6.71□□□□□ -1.34
SCAF11-213ENST00000550629 PRAMEF18Q5VWM3 479 aa6.71□□□□□ -1.34
SCAF11-213ENST00000550629 STOX1Q6ZVD7 989 aa6.71□□□□□ -1.34
SCAF11-213ENST00000550629 MIGA2Q7L4E1 593 aa6.71□□□□□ -1.34
SCAF11-213ENST00000550629 SLCO6A1Q86UG4 719 aa6.71□□□□□ -1.34
SCAF11-213ENST00000550629 IQCA1Q86XH1 822 aa6.71□□□□□ -1.34
SCAF11-213ENST00000550629 SCYL3Q8IZE3 742 aa6.71□□□□□ -1.34
SCAF11-213ENST00000550629 FBXL16Q8N461 479 aa6.71□□□□□ -1.34
SCAF11-213ENST00000550629 SLC44A5Q8NCS7 719 aa6.71□□□□□ -1.34
SCAF11-213ENST00000550629 KLHL6Q8WZ60 621 aa6.71□□□□□ -1.34
SCAF11-213ENST00000550629 ANKS1AQ92625 1134 aa6.71□□□□□ -1.34
SCAF11-213ENST00000550629 ANAPC16Q96DE5 110 aa6.71□□□□□ -1.34
SCAF11-213ENST00000550629 TTC14Q96N46 770 aa6.71□□□□□ -1.34
SCAF11-213ENST00000550629 NEK1Q96PY6 1258 aa6.71□□□□□ -1.34
SCAF11-213ENST00000550629 WRNIP1Q96S55 665 aa6.71□□□□□ -1.34
SCAF11-213ENST00000550629 KLHL25Q9H0H3 589 aa6.71□□□□□ -1.34
SCAF11-213ENST00000550629 ALDH8A1Q9H2A2 487 aaPredicted RBP6.71□□□□□ -1.34
SCAF11-213ENST00000550629 ZNF552Q9H707 407 aaPredicted RBP6.71□□□□□ -1.34
SCAF11-213ENST00000550629 KANSL2Q9H9L4 492 aa6.71□□□□□ -1.34
SCAF11-213ENST00000550629 CABP5Q9NP86 173 aa6.71□□□□□ -1.34
SCAF11-213ENST00000550629 CRTAC1Q9NQ79 661 aa6.71□□□□□ -1.34
SCAF11-213ENST00000550629 ZBTB21Q9ULJ3 1066 aa6.71□□□□□ -1.34
SCAF11-213ENST00000550629 STRIP2Q9ULQ0 834 aa6.71□□□□□ -1.34
SCAF11-213ENST00000550629 SCAF8Q9UPN6 1271 aaKnown RBP6.71□□□□□ -1.34
SCAF11-213ENST00000550629 SF3B6Q9Y3B4 125 aaKnown RBP6.71□□□□□ -1.34
SCAF11-213ENST00000550629 TAF6LQ9Y6J9 622 aa6.71□□□□□ -1.34
SCAF11-213ENST00000550629 NEDD4P46934 1319 aa6.71□□□□□ -1.34
SCAF11-213ENST00000550629 SIPA1L1O43166 1804 aa6.71□□□□□ -1.34
SCAF11-213ENST00000550629 BAZ2AQ9UIF9 1905 aaKnown RBP6.7□□□□□ -1.34
SCAF11-213ENST00000550629 IGKV6D-41A0A0C4DH26 115 aa6.7□□□□□ -1.34
SCAF11-213ENST00000550629 TSPY2A6NKD2 308 aa6.7□□□□□ -1.34
SCAF11-213ENST00000550629 SMIM22K7EJ46 135 aa6.7□□□□□ -1.34
SCAF11-213ENST00000550629 RANBP6O60518 1105 aaKnown RBP6.7□□□□□ -1.34
SCAF11-213ENST00000550629 PRDM1O75626 825 aa6.7□□□□□ -1.34
SCAF11-213ENST00000550629 TFAP4Q01664 338 aa6.7□□□□□ -1.34
SCAF11-213ENST00000550629 EXOSC10Q01780 885 aaKnown RBP6.7□□□□□ -1.34
SCAF11-213ENST00000550629 VGLL4Q14135 290 aa6.7□□□□□ -1.34
SCAF11-213ENST00000550629 PPP2R5DQ14738 602 aa6.7□□□□□ -1.34
SCAF11-213ENST00000550629 RABEP1Q15276 862 aa6.7□□□□□ -1.34
SCAF11-213ENST00000550629 ADGRF1Q5T601 910 aa6.7□□□□□ -1.34
SCAF11-213ENST00000550629 CST9Q5W186 159 aa6.7□□□□□ -1.34
SCAF11-213ENST00000550629 HEATR6Q6AI08 1181 aaKnown RBP6.7□□□□□ -1.34
SCAF11-213ENST00000550629 GALNT18Q6P9A2 607 aa6.7□□□□□ -1.34
SCAF11-213ENST00000550629 BLOC1S2Q6QNY1 142 aa6.7□□□□□ -1.34
SCAF11-213ENST00000550629 RUFY3Q7L099 469 aa6.7□□□□□ -1.34
SCAF11-213ENST00000550629 DGKHQ86XP1 1220 aa6.7□□□□□ -1.34
SCAF11-213ENST00000550629 ERO1BQ86YB8 467 aa6.7□□□□□ -1.34
SCAF11-213ENST00000550629 MB21D2Q8IYB1 491 aaPredicted RBP6.7□□□□□ -1.34
SCAF11-213ENST00000550629 TMTC2Q8N394 836 aa6.7□□□□□ -1.34
SCAF11-213ENST00000550629 ADCY4Q8NFM4 1077 aa6.7□□□□□ -1.34
SCAF11-213ENST00000550629 FGD4Q96M96 766 aa6.7□□□□□ -1.34
SCAF11-213ENST00000550629 JAKMIP1Q96N16 626 aaKnown RBP6.7□□□□□ -1.34
SCAF11-213ENST00000550629 FCRL3Q96P31 734 aaPredicted RBP6.7□□□□□ -1.34
SCAF11-213ENST00000550629 UBAC1Q9BSL1 405 aa6.7□□□□□ -1.34
SCAF11-213ENST00000550629 MCOLN1Q9GZU1 580 aa6.7□□□□□ -1.34
SCAF11-213ENST00000550629 SH2D4AQ9H788 454 aa6.7□□□□□ -1.34
SCAF11-213ENST00000550629 TOMM22Q9NS69 142 aa6.7□□□□□ -1.34
SCAF11-213ENST00000550629 WHRNQ9P202 907 aa6.7□□□□□ -1.34
SCAF11-213ENST00000550629 CYP46A1Q9Y6A2 500 aa6.7□□□□□ -1.34
SCAF11-213ENST00000550629 MYOCOSA0A1B0GUC4 107 aa6.69□□□□□ -1.34
SCAF11-213ENST00000550629 A0A1W2PQ45 241 aaPredicted RBP6.69□□□□□ -1.34
SCAF11-213ENST00000550629 A0A1W2PQY0 241 aa6.69□□□□□ -1.34
SCAF11-213ENST00000550629 ERICH2A1L162 156 aa6.69□□□□□ -1.34
SCAF11-213ENST00000550629 OR14I1A6ND48 311 aa6.69□□□□□ -1.34
SCAF11-213ENST00000550629 B4E1Z4 1266 aa6.69□□□□□ -1.34
SCAF11-213ENST00000550629 MPHOSPH10O00566 681 aaKnown RBP6.69□□□□□ -1.34
SCAF11-213ENST00000550629 PRC1O43663 620 aa6.69□□□□□ -1.34
SCAF11-213ENST00000550629 TTLL1O95922 423 aa6.69□□□□□ -1.34
SCAF11-213ENST00000550629 GH2P01242 217 aa6.69□□□□□ -1.34
SCAF11-213ENST00000550629 EPHX1P07099 455 aa6.69□□□□□ -1.34
SCAF11-213ENST00000550629 AKR1B1P15121 316 aa6.69□□□□□ -1.34
SCAF11-213ENST00000550629 PNLIPP16233 465 aa6.69□□□□□ -1.34
SCAF11-213ENST00000550629 CASTP20810 708 aaKnown RBP6.69□□□□□ -1.34
SCAF11-213ENST00000550629 SDHBP21912 280 aa6.69□□□□□ -1.34
SCAF11-213ENST00000550629 RPS6KB1P23443 525 aa6.69□□□□□ -1.34
SCAF11-213ENST00000550629 LIFRP42702 1097 aa6.69□□□□□ -1.34
SCAF11-213ENST00000550629 NOP2P46087 812 aaKnown RBP6.69□□□□□ -1.34
SCAF11-213ENST00000550629 ICA1Q05084 483 aa6.69□□□□□ -1.34
SCAF11-213ENST00000550629 PPATQ06203 517 aa6.69□□□□□ -1.34
SCAF11-213ENST00000550629 RRP1BQ14684 758 aaKnown RBP6.69□□□□□ -1.34
SCAF11-213ENST00000550629 ANKRD1Q15327 319 aa6.69□□□□□ -1.34
SCAF11-213ENST00000550629 ADCK5Q3MIX3 580 aa6.69□□□□□ -1.34
SCAF11-213ENST00000550629 RRP12Q5JTH9 1297 aaKnown RBP6.69□□□□□ -1.34
SCAF11-213ENST00000550629 DLK2Q6UY11 383 aa6.69□□□□□ -1.34
SCAF11-213ENST00000550629 ADAT2Q7Z6V5 191 aaKnown RBP6.69□□□□□ -1.34
SCAF11-213ENST00000550629 SAPCD2Q86UD0 394 aa6.69□□□□□ -1.34
SCAF11-213ENST00000550629 NAT16Q8N8M0 369 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms