RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 RIPK2O43353 540 aa15.22■□□□□ 0.03
RAPGEF3-218ENST00000548919 BCRP11274 1271 aa15.22■□□□□ 0.03
RAPGEF3-218ENST00000548919 ECE1P42892 770 aa15.22■□□□□ 0.03
RAPGEF3-218ENST00000548919 GPC5P78333 572 aa15.22■□□□□ 0.03
RAPGEF3-218ENST00000548919 HIBCHQ6NVY1 386 aaPredicted RBP15.22■□□□□ 0.03
RAPGEF3-218ENST00000548919 TRMT1LQ7Z2T5 733 aaKnown RBP15.22■□□□□ 0.03
RAPGEF3-218ENST00000548919 GMCL1P1Q8NEA9 526 aa15.22■□□□□ 0.03
RAPGEF3-218ENST00000548919 ZDHHC15Q96MV8 337 aa15.22■□□□□ 0.03
RAPGEF3-218ENST00000548919 CBWD1Q9BRT8 395 aa15.22■□□□□ 0.03
RAPGEF3-218ENST00000548919 DDX23Q9BUQ8 820 aaKnown RBP15.22■□□□□ 0.03
RAPGEF3-218ENST00000548919 K7ENM7 598 aa15.21■□□□□ 0.03
RAPGEF3-218ENST00000548919 PPP2R5CQ13362 524 aa15.21■□□□□ 0.03
RAPGEF3-218ENST00000548919 LONRF1Q17RB8 773 aa15.21■□□□□ 0.03
RAPGEF3-218ENST00000548919 MSL1Q68DK7 614 aa15.21■□□□□ 0.03
RAPGEF3-218ENST00000548919 C11orf63Q6NUN7 778 aa15.21■□□□□ 0.03
RAPGEF3-218ENST00000548919 PIGWQ7Z7B1 504 aa15.21■□□□□ 0.03
RAPGEF3-218ENST00000548919 ANKS4BQ8N8V4 417 aa15.21■□□□□ 0.03
RAPGEF3-218ENST00000548919 LXNQ9BS40 222 aa15.21■□□□□ 0.03
RAPGEF3-218ENST00000548919 MTRF1LQ9UGC7 380 aaKnown RBP15.21■□□□□ 0.03
RAPGEF3-218ENST00000548919 MIF4GDA9UHW6 222 aaKnown RBP15.21■□□□□ 0.03
RAPGEF3-218ENST00000548919 RASGRF2O14827 1237 aa15.21■□□□□ 0.03
RAPGEF3-218ENST00000548919 RARAP10276 462 aa15.21■□□□□ 0.03
RAPGEF3-218ENST00000548919 CREB1P16220 341 aa15.21■□□□□ 0.03
RAPGEF3-218ENST00000548919 ELF3P78545 371 aaPredicted RBP15.21■□□□□ 0.03
RAPGEF3-218ENST00000548919 AUHQ13825 339 aaKnown RBP15.21■□□□□ 0.03
RAPGEF3-218ENST00000548919 C6orf118Q5T5N4 469 aa15.21■□□□□ 0.03
RAPGEF3-218ENST00000548919 SEL1L2Q5TEA6 688 aa15.21■□□□□ 0.03
RAPGEF3-218ENST00000548919 NSMFQ6X4W1 530 aa15.21■□□□□ 0.03
RAPGEF3-218ENST00000548919 NOP9Q86U38 636 aaKnown RBP15.21■□□□□ 0.03
RAPGEF3-218ENST00000548919 SLC5A5Q92911 643 aa15.21■□□□□ 0.03
RAPGEF3-218ENST00000548919 NACC1Q96RE7 527 aa15.21■□□□□ 0.03
RAPGEF3-218ENST00000548919 MLXIPLQ9NP71 852 aa15.21■□□□□ 0.03
RAPGEF3-218ENST00000548919 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.21■□□□□ 0.03
RAPGEF3-218ENST00000548919 MCM8Q9UJA3 840 aa15.21■□□□□ 0.03
RAPGEF3-218ENST00000548919 LRRC37AA6NMS7 1700 aa15.21■□□□□ 0.02
RAPGEF3-218ENST00000548919 DNAJC8O75937 253 aaPredicted RBP15.2■□□□□ 0.02
RAPGEF3-218ENST00000548919 ACSL3O95573 720 aa15.2■□□□□ 0.02
RAPGEF3-218ENST00000548919 CHRNB2P17787 502 aa15.2■□□□□ 0.02
RAPGEF3-218ENST00000548919 ADRA2BP18089 450 aa15.2■□□□□ 0.02
RAPGEF3-218ENST00000548919 ADCY2Q08462 1091 aa15.2■□□□□ 0.02
RAPGEF3-218ENST00000548919 STXBP4Q6ZWJ1 553 aa15.2■□□□□ 0.02
RAPGEF3-218ENST00000548919 SLC47A2Q86VL8 602 aa15.2■□□□□ 0.02
RAPGEF3-218ENST00000548919 DHX37Q8IY37 1157 aaKnown RBP15.2■□□□□ 0.02
RAPGEF3-218ENST00000548919 PLEKHO2Q8TD55 490 aa15.2■□□□□ 0.02
RAPGEF3-218ENST00000548919 TBC1D31Q96DN5 1066 aa15.2■□□□□ 0.02
RAPGEF3-218ENST00000548919 ZNF577Q9BSK1 485 aa15.2■□□□□ 0.02
RAPGEF3-218ENST00000548919 ABCF3Q9NUQ8 709 aa15.2■□□□□ 0.02
RAPGEF3-218ENST00000548919 DNAJC17Q9NVM6 304 aaKnown RBP15.2■□□□□ 0.02
RAPGEF3-218ENST00000548919 SEL1LQ9UBV2 794 aa15.2■□□□□ 0.02
RAPGEF3-218ENST00000548919 ARHGEF35A5YM69 484 aa15.2■□□□□ 0.02
RAPGEF3-218ENST00000548919 PIK3CDO00329 1044 aa15.2■□□□□ 0.02
RAPGEF3-218ENST00000548919 PODXLO00592 558 aa15.2■□□□□ 0.02
RAPGEF3-218ENST00000548919 ASAP2O43150 1006 aa15.2■□□□□ 0.02
RAPGEF3-218ENST00000548919 CYP26A1O43174 497 aa15.2■□□□□ 0.02
RAPGEF3-218ENST00000548919 SPOPO43791 374 aa15.2■□□□□ 0.02
RAPGEF3-218ENST00000548919 AGTP01019 485 aa15.2■□□□□ 0.02
RAPGEF3-218ENST00000548919 DLATP10515 647 aaKnown RBP15.2■□□□□ 0.02
RAPGEF3-218ENST00000548919 GHRP10912 638 aa15.2■□□□□ 0.02
RAPGEF3-218ENST00000548919 COILP38432 576 aaPredicted RBP15.2■□□□□ 0.02
RAPGEF3-218ENST00000548919 VAMP7P51809 220 aa15.2■□□□□ 0.02
RAPGEF3-218ENST00000548919 C1orf220Q5T0J3 134 aa15.2■□□□□ 0.02
RAPGEF3-218ENST00000548919 TCP11Q8WWU5 503 aa15.2■□□□□ 0.02
RAPGEF3-218ENST00000548919 SAMD15Q9P1V8 674 aa15.2■□□□□ 0.02
RAPGEF3-218ENST00000548919 RBBP6Q7Z6E9 1792 aaKnown RBP15.19■□□□□ 0.02
RAPGEF3-218ENST00000548919 HADHBP55084 474 aaKnown RBP15.19■□□□□ 0.02
RAPGEF3-218ENST00000548919 SNX1Q13596 522 aa15.19■□□□□ 0.02
RAPGEF3-218ENST00000548919 WLSQ5T9L3 541 aa15.19■□□□□ 0.02
RAPGEF3-218ENST00000548919 COL23A1Q86Y22 540 aaPredicted RBP15.19■□□□□ 0.02
RAPGEF3-218ENST00000548919 SLC13A5Q86YT5 568 aaPredicted RBP15.19■□□□□ 0.02
RAPGEF3-218ENST00000548919 GIMAP7Q8NHV1 300 aa15.19■□□□□ 0.02
RAPGEF3-218ENST00000548919 EPS8L1Q8TE68 723 aa15.19■□□□□ 0.02
RAPGEF3-218ENST00000548919 NUP85Q9BW27 656 aa15.19■□□□□ 0.02
RAPGEF3-218ENST00000548919 BAIAP2L1Q9UHR4 511 aa15.19■□□□□ 0.02
RAPGEF3-218ENST00000548919 CNOT7Q9UIV1 285 aaKnown RBP15.19■□□□□ 0.02
RAPGEF3-218ENST00000548919 AGAP1Q9UPQ3 857 aa15.19■□□□□ 0.02
RAPGEF3-218ENST00000548919 GOLGA8IPA6NC78 632 aa15.19■□□□□ 0.02
RAPGEF3-218ENST00000548919 GOLGA8JA6NMD2 632 aa15.19■□□□□ 0.02
RAPGEF3-218ENST00000548919 MGRN1O60291 552 aa15.19■□□□□ 0.02
RAPGEF3-218ENST00000548919 CALCAP01258 141 aa15.19■□□□□ 0.02
RAPGEF3-218ENST00000548919 NEDD9Q14511 834 aa15.19■□□□□ 0.02
RAPGEF3-218ENST00000548919 SIX1Q15475 284 aaPredicted RBP15.19■□□□□ 0.02
RAPGEF3-218ENST00000548919 CNGA2Q16280 664 aa15.19■□□□□ 0.02
RAPGEF3-218ENST00000548919 TBC1D1Q86TI0 1168 aaPredicted RBP15.19■□□□□ 0.02
RAPGEF3-218ENST00000548919 EXOC3L1Q86VI1 746 aa15.19■□□□□ 0.02
RAPGEF3-218ENST00000548919 C1orf54Q8WWF1 131 aa15.19■□□□□ 0.02
RAPGEF3-218ENST00000548919 P3H4Q92791 437 aa15.19■□□□□ 0.02
RAPGEF3-218ENST00000548919 CD101Q93033 1021 aa15.19■□□□□ 0.02
RAPGEF3-218ENST00000548919 ART4Q93070 314 aa15.19■□□□□ 0.02
RAPGEF3-218ENST00000548919 ODF2LQ9ULJ1 636 aa15.19■□□□□ 0.02
RAPGEF3-218ENST00000548919 UBR3Q6ZT12 1888 aa15.19■□□□□ 0.02
RAPGEF3-218ENST00000548919 UBE4BO95155 1302 aa15.19■□□□□ 0.02
RAPGEF3-218ENST00000548919 KLRG2A4D1S0 409 aaPredicted RBP15.19■□□□□ 0.02
RAPGEF3-218ENST00000548919 CLDN3O15551 220 aa15.19■□□□□ 0.02
RAPGEF3-218ENST00000548919 RTN2O75298 545 aa15.19■□□□□ 0.02
RAPGEF3-218ENST00000548919 CLTAP09496 248 aa15.19■□□□□ 0.02
RAPGEF3-218ENST00000548919 ALAS1P13196 640 aa15.19■□□□□ 0.02
RAPGEF3-218ENST00000548919 RARGP13631 454 aa15.19■□□□□ 0.02
RAPGEF3-218ENST00000548919 CEP55Q53EZ4 464 aa15.19■□□□□ 0.02
RAPGEF3-218ENST00000548919 TRPM8Q7Z2W7 1104 aa15.19■□□□□ 0.02
RAPGEF3-218ENST00000548919 PNMA8AQ86V59 439 aaPredicted RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms