RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 Q6ZUG5 572 aa9.53□□□□□ -0.88
TROAP-208ENST00000548817 ZNF598Q86UK7 904 aaKnown RBP9.53□□□□□ -0.88
TROAP-208ENST00000548817 RASEFQ8IZ41 740 aa9.53□□□□□ -0.88
TROAP-208ENST00000548817 FEZF2Q8TBJ5 459 aa9.53□□□□□ -0.88
TROAP-208ENST00000548817 TEKT3Q9BXF9 490 aa9.53□□□□□ -0.88
TROAP-208ENST00000548817 C22orf23Q9BZE7 217 aa9.53□□□□□ -0.88
TROAP-208ENST00000548817 MAN1C1Q9NR34 630 aa9.53□□□□□ -0.88
TROAP-208ENST00000548817 DISC1Q9NRI5 854 aa9.53□□□□□ -0.88
TROAP-208ENST00000548817 SSX2IPQ9Y2D8 614 aa9.53□□□□□ -0.88
TROAP-208ENST00000548817 NUMBLQ9Y6R0 609 aa9.53□□□□□ -0.88
TROAP-208ENST00000548817 MYH15Q9Y2K3 1946 aa9.52□□□□□ -0.88
TROAP-208ENST00000548817 CCDC195A0A1B0GUA6 201 aa9.52□□□□□ -0.89
TROAP-208ENST00000548817 NT5C1B-RDH14C9J2C7 533 aa9.52□□□□□ -0.89
TROAP-208ENST00000548817 TM4SF5O14894 197 aa9.52□□□□□ -0.89
TROAP-208ENST00000548817 INPPL1O15357 1258 aa9.52□□□□□ -0.89
TROAP-208ENST00000548817 CHMP2AO43633 222 aa9.52□□□□□ -0.89
TROAP-208ENST00000548817 LILRB3O75022 631 aa9.52□□□□□ -0.89
TROAP-208ENST00000548817 ADH1AP07327 375 aa9.52□□□□□ -0.89
TROAP-208ENST00000548817 CNPP09543 421 aaKnown RBP9.52□□□□□ -0.89
TROAP-208ENST00000548817 SKIP12755 728 aa9.52□□□□□ -0.89
TROAP-208ENST00000548817 KCNA4P22459 653 aa9.52□□□□□ -0.89
TROAP-208ENST00000548817 PSMA5P28066 241 aa9.52□□□□□ -0.89
TROAP-208ENST00000548817 CIITAP33076 1130 aa9.52□□□□□ -0.89
TROAP-208ENST00000548817 USP11P51784 963 aa9.52□□□□□ -0.89
TROAP-208ENST00000548817 LRCH2Q5VUJ6 765 aa9.52□□□□□ -0.89
TROAP-208ENST00000548817 RALGAPA1Q6GYQ0 2036 aa9.52□□□□□ -0.89
TROAP-208ENST00000548817 TRIM22Q8IYM9 498 aa9.52□□□□□ -0.89
TROAP-208ENST00000548817 LRRC71Q8N4P6 559 aa9.52□□□□□ -0.89
TROAP-208ENST00000548817 SMG7Q92540 1137 aaKnown RBP9.52□□□□□ -0.89
TROAP-208ENST00000548817 BRF1Q92994 677 aa9.52□□□□□ -0.89
TROAP-208ENST00000548817 CCDC136Q96JN2 1154 aa9.52□□□□□ -0.89
TROAP-208ENST00000548817 JAKMIP1Q96N16 626 aaKnown RBP9.52□□□□□ -0.89
TROAP-208ENST00000548817 RIT2Q99578 217 aa9.52□□□□□ -0.89
TROAP-208ENST00000548817 SLC26A6Q9BXS9 759 aa9.52□□□□□ -0.89
TROAP-208ENST00000548817 GCOM2Q9BZD3 368 aaPredicted RBP9.52□□□□□ -0.89
TROAP-208ENST00000548817 INO80BQ9C086 356 aaPredicted RBP9.52□□□□□ -0.89
TROAP-208ENST00000548817 ADAMTS10Q9H324 1103 aa9.52□□□□□ -0.89
TROAP-208ENST00000548817 MRPL17Q9NRX2 175 aaKnown RBP9.52□□□□□ -0.89
TROAP-208ENST00000548817 FAM217BQ9NTX9 383 aaPredicted RBP9.52□□□□□ -0.89
TROAP-208ENST00000548817 MRPS17Q9Y2R5 130 aaKnown RBP9.52□□□□□ -0.89
TROAP-208ENST00000548817 ZC3H11AO75152 810 aaKnown RBP eCLIP9.51□□□□□ -0.89
TROAP-208ENST00000548817 TDGF1P13385 188 aa9.51□□□□□ -0.89
TROAP-208ENST00000548817 DARSP14868 501 aaKnown RBP9.51□□□□□ -0.89
TROAP-208ENST00000548817 SFPQP23246 707 aaKnown RBP eCLIP9.51□□□□□ -0.89
TROAP-208ENST00000548817 CNR2P34972 360 aa9.51□□□□□ -0.89
TROAP-208ENST00000548817 GPC3P51654 580 aa9.51□□□□□ -0.89
TROAP-208ENST00000548817 NLRP5P59047 1200 aa9.51□□□□□ -0.89
TROAP-208ENST00000548817 GPC5P78333 572 aa9.51□□□□□ -0.89
TROAP-208ENST00000548817 PRKCEQ02156 737 aa9.51□□□□□ -0.89
TROAP-208ENST00000548817 RNASELQ05823 741 aaKnown RBP9.51□□□□□ -0.89
TROAP-208ENST00000548817 SNW1Q13573 536 aaKnown RBP9.51□□□□□ -0.89
TROAP-208ENST00000548817 SLC44A4Q53GD3 710 aa9.51□□□□□ -0.89
TROAP-208ENST00000548817 MTSS1LQ765P7 747 aa9.51□□□□□ -0.89
TROAP-208ENST00000548817 CENPQQ7L2Z9 268 aaPredicted RBP9.51□□□□□ -0.89
TROAP-208ENST00000548817 MIER3Q7Z3K6 550 aa9.51□□□□□ -0.89
TROAP-208ENST00000548817 TMEM173Q86WV6 379 aaPredicted RBP9.51□□□□□ -0.89
TROAP-208ENST00000548817 RDM1Q8NG50 284 aa9.51□□□□□ -0.89
TROAP-208ENST00000548817 HELQQ8TDG4 1101 aa9.51□□□□□ -0.89
TROAP-208ENST00000548817 CRYGNQ8WXF5 182 aa9.51□□□□□ -0.89
TROAP-208ENST00000548817 PHKBQ93100 1093 aa9.51□□□□□ -0.89
TROAP-208ENST00000548817 ZNF668Q96K58 619 aaPredicted RBP9.51□□□□□ -0.89
TROAP-208ENST00000548817 JPH2Q9BR39 696 aaPredicted RBP9.51□□□□□ -0.89
TROAP-208ENST00000548817 RNF26Q9BY78 433 aaPredicted RBP9.51□□□□□ -0.89
TROAP-208ENST00000548817 PLEKHA4Q9H4M7 779 aa9.51□□□□□ -0.89
TROAP-208ENST00000548817 CHST12Q9NRB3 414 aa9.51□□□□□ -0.89
TROAP-208ENST00000548817 ZDHHC7Q9NXF8 308 aa9.51□□□□□ -0.89
TROAP-208ENST00000548817 SEPT9Q9UHD8 586 aaPredicted RBP9.51□□□□□ -0.89
TROAP-208ENST00000548817 LHX6Q9UPM6 363 aa9.51□□□□□ -0.89
TROAP-208ENST00000548817 WDR81Q562E7 1941 aa9.5□□□□□ -0.89
TROAP-208ENST00000548817 DDX11L8A8MPP1 907 aa9.5□□□□□ -0.89
TROAP-208ENST00000548817 C1QTNF9BB2RNN3 333 aa9.5□□□□□ -0.89
TROAP-208ENST00000548817 CPLX1O14810 134 aa9.5□□□□□ -0.89
TROAP-208ENST00000548817 MSH4O15457 936 aa9.5□□□□□ -0.89
TROAP-208ENST00000548817 GLUD1P00367 558 aa9.5□□□□□ -0.89
TROAP-208ENST00000548817 GALTP07902 379 aa9.5□□□□□ -0.89
TROAP-208ENST00000548817 C1QTNF9P0C862 333 aa9.5□□□□□ -0.89
TROAP-208ENST00000548817 CPA1P15085 419 aa9.5□□□□□ -0.89
TROAP-208ENST00000548817 SSRP1Q08945 709 aaKnown RBP9.5□□□□□ -0.89
TROAP-208ENST00000548817 MTERF2Q49AM1 385 aa9.5□□□□□ -0.89
TROAP-208ENST00000548817 XKR3Q5GH77 459 aa9.5□□□□□ -0.89
TROAP-208ENST00000548817 TWF2Q6IBS0 349 aaKnown RBP9.5□□□□□ -0.89
TROAP-208ENST00000548817 CPLX2Q6PUV4 134 aaKnown RBP9.5□□□□□ -0.89
TROAP-208ENST00000548817 TSSK4Q6SA08 328 aa9.5□□□□□ -0.89
TROAP-208ENST00000548817 GLB1LQ6UWU2 654 aa9.5□□□□□ -0.89
TROAP-208ENST00000548817 ZNF707Q96C28 371 aaPredicted RBP9.5□□□□□ -0.89
TROAP-208ENST00000548817 TRAIPQ9BWF2 469 aa9.5□□□□□ -0.89
TROAP-208ENST00000548817 PIDD1Q9HB75 910 aa9.5□□□□□ -0.89
TROAP-208ENST00000548817 SH3GLB2Q9NR46 395 aa9.5□□□□□ -0.89
TROAP-208ENST00000548817 VPS54Q9P1Q0 977 aa9.5□□□□□ -0.89
TROAP-208ENST00000548817 MTF2Q9Y483 593 aaPredicted RBP9.5□□□□□ -0.89
TROAP-208ENST00000548817 IGSF10Q6WRI0 2623 aa9.5□□□□□ -0.89
TROAP-208ENST00000548817 GREB1Q4ZG55 1949 aa9.49□□□□□ -0.89
TROAP-208ENST00000548817 SRRM3A6NNA2 597 aaPredicted RBP9.49□□□□□ -0.89
TROAP-208ENST00000548817 TAF4O00268 1085 aa9.49□□□□□ -0.89
TROAP-208ENST00000548817 ZNF862O60290 1169 aa9.49□□□□□ -0.89
TROAP-208ENST00000548817 MARCH6O60337 910 aa9.49□□□□□ -0.89
TROAP-208ENST00000548817 GDF9O60383 454 aa9.49□□□□□ -0.89
TROAP-208ENST00000548817 DKC1O60832 514 aaKnown RBP eCLIP9.49□□□□□ -0.89
TROAP-208ENST00000548817 URODP06132 367 aa9.49□□□□□ -0.89
TROAP-208ENST00000548817 IFNAR1P17181 557 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms