RNA–Protein interactions for RNA: ENST00000548524.5

USP15-208, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 2

Gene USP15, Length 648 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-208ENST00000548524 CLDND1Q9NY35 253 aa10.52□□□□□ -0.73
USP15-208ENST00000548524 SPG21Q9NZD8 308 aa10.52□□□□□ -0.73
USP15-208ENST00000548524 TTC3P53804 2025 aa10.51□□□□□ -0.73
USP15-208ENST00000548524 COL4A4P53420 1690 aaPredicted RBP10.51□□□□□ -0.73
USP15-208ENST00000548524 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.51□□□□□ -0.73
USP15-208ENST00000548524 MEIS3P2A8K0S8 358 aa10.51□□□□□ -0.73
USP15-208ENST00000548524 E9PMD0 336 aa10.51□□□□□ -0.73
USP15-208ENST00000548524 ZC3H11AO75152 810 aaKnown RBP eCLIP10.51□□□□□ -0.73
USP15-208ENST00000548524 OFD1O75665 1012 aa10.51□□□□□ -0.73
USP15-208ENST00000548524 ZMYND10O75800 440 aa10.51□□□□□ -0.73
USP15-208ENST00000548524 EYA4O95677 639 aa10.51□□□□□ -0.73
USP15-208ENST00000548524 SSBP05455 408 aaKnown RBP eCLIP10.51□□□□□ -0.73
USP15-208ENST00000548524 BMP1P13497 986 aa10.51□□□□□ -0.73
USP15-208ENST00000548524 ITGA4P13612 1032 aa10.51□□□□□ -0.73
USP15-208ENST00000548524 ARF4P18085 180 aaPredicted RBP10.51□□□□□ -0.73
USP15-208ENST00000548524 NCLP19338 710 aaKnown RBP10.51□□□□□ -0.73
USP15-208ENST00000548524 FECHP22830 423 aa10.51□□□□□ -0.73
USP15-208ENST00000548524 IRS1P35568 1242 aa10.51□□□□□ -0.73
USP15-208ENST00000548524 PBX3P40426 434 aa10.51□□□□□ -0.73
USP15-208ENST00000548524 NAMPTP43490 491 aa10.51□□□□□ -0.73
USP15-208ENST00000548524 ALDH7A1P49419 539 aaKnown RBP10.51□□□□□ -0.73
USP15-208ENST00000548524 BCAR1P56945 870 aa10.51□□□□□ -0.73
USP15-208ENST00000548524 PLCB3Q01970 1234 aa10.51□□□□□ -0.73
USP15-208ENST00000548524 HYAL1Q12794 435 aa10.51□□□□□ -0.73
USP15-208ENST00000548524 UBXN11Q5T124 520 aa10.51□□□□□ -0.73
USP15-208ENST00000548524 MRPL10Q7Z7H8 261 aaKnown RBP10.51□□□□□ -0.73
USP15-208ENST00000548524 HSCBQ8IWL3 235 aa10.51□□□□□ -0.73
USP15-208ENST00000548524 MRPS27Q92552 414 aaKnown RBP10.51□□□□□ -0.73
USP15-208ENST00000548524 KIFAP3Q92845 792 aa10.51□□□□□ -0.73
USP15-208ENST00000548524 INTS4Q96HW7 963 aaKnown RBP10.51□□□□□ -0.73
USP15-208ENST00000548524 FAM193BQ96PV7 902 aaPredicted RBP10.51□□□□□ -0.73
USP15-208ENST00000548524 APOL6Q9BWW8 343 aa10.51□□□□□ -0.73
USP15-208ENST00000548524 EIF2AQ9BY44 585 aaKnown RBP10.51□□□□□ -0.73
USP15-208ENST00000548524 GBP3Q9H0R5 595 aa10.51□□□□□ -0.73
USP15-208ENST00000548524 CSRNP2Q9H175 543 aa10.51□□□□□ -0.73
USP15-208ENST00000548524 RSAD1Q9HA92 442 aa10.51□□□□□ -0.73
USP15-208ENST00000548524 UBN1Q9NPG3 1134 aa10.51□□□□□ -0.73
USP15-208ENST00000548524 CNTNAP2Q9UHC6 1331 aa10.51□□□□□ -0.73
USP15-208ENST00000548524 PRUNE2Q8WUY3 3088 aa10.5□□□□□ -0.73
USP15-208ENST00000548524 CARNS1A5YM72 827 aa10.5□□□□□ -0.73
USP15-208ENST00000548524 NT5C1B-RDH14C9J2C7 533 aa10.5□□□□□ -0.73
USP15-208ENST00000548524 H3BQ06 376 aaPredicted RBP10.5□□□□□ -0.73
USP15-208ENST00000548524 B4GALT5O43286 388 aa10.5□□□□□ -0.73
USP15-208ENST00000548524 NPTXRO95502 500 aa10.5□□□□□ -0.73
USP15-208ENST00000548524 PRKCBP05771 671 aa10.5□□□□□ -0.73
USP15-208ENST00000548524 SYT1P21579 422 aa10.5□□□□□ -0.73
USP15-208ENST00000548524 CA8P35219 290 aa10.5□□□□□ -0.73
USP15-208ENST00000548524 NRIP1P48552 1158 aa10.5□□□□□ -0.73
USP15-208ENST00000548524 CAMK1Q14012 370 aa10.5□□□□□ -0.73
USP15-208ENST00000548524 BMS1Q14692 1282 aaKnown RBP10.5□□□□□ -0.73
USP15-208ENST00000548524 SF3A1Q15459 793 aaKnown RBP10.5□□□□□ -0.73
USP15-208ENST00000548524 MAPK6Q16659 721 aa10.5□□□□□ -0.73
USP15-208ENST00000548524 AMHR2Q16671 573 aa10.5□□□□□ -0.73
USP15-208ENST00000548524 LEXMQ3ZCV2 418 aa10.5□□□□□ -0.73
USP15-208ENST00000548524 PLPP4Q5VZY2 271 aa10.5□□□□□ -0.73
USP15-208ENST00000548524 CDCA2Q69YH5 1023 aaPredicted RBP10.5□□□□□ -0.73
USP15-208ENST00000548524 PDE12Q6L8Q7 609 aaKnown RBP10.5□□□□□ -0.73
USP15-208ENST00000548524 AGMOQ6ZNB7 445 aa10.5□□□□□ -0.73
USP15-208ENST00000548524 TMC7Q7Z402 723 aa10.5□□□□□ -0.73
USP15-208ENST00000548524 RBM23Q86U06 439 aaKnown RBP10.5□□□□□ -0.73
USP15-208ENST00000548524 CABP7Q86V35 215 aa10.5□□□□□ -0.73
USP15-208ENST00000548524 SMG8Q8ND04 991 aaKnown RBP10.5□□□□□ -0.73
USP15-208ENST00000548524 RASSF8Q8NHQ8 419 aa10.5□□□□□ -0.73
USP15-208ENST00000548524 BSNDQ8WZ55 320 aa10.5□□□□□ -0.73
USP15-208ENST00000548524 TMEM169Q96HH4 297 aa10.5□□□□□ -0.73
USP15-208ENST00000548524 PRIMPOLQ96LW4 560 aa10.5□□□□□ -0.73
USP15-208ENST00000548524 PLIN2Q99541 437 aa10.5□□□□□ -0.73
USP15-208ENST00000548524 MMTAG2Q9BU76 263 aaKnown RBP10.5□□□□□ -0.73
USP15-208ENST00000548524 NT5C3AQ9H0P0 336 aa10.5□□□□□ -0.73
USP15-208ENST00000548524 NRDE2Q9H7Z3 1164 aa10.5□□□□□ -0.73
USP15-208ENST00000548524 TLE6Q9H808 572 aa10.5□□□□□ -0.73
USP15-208ENST00000548524 POLD4Q9HCU8 107 aa10.5□□□□□ -0.73
USP15-208ENST00000548524 ENTPD7Q9NQZ7 604 aa10.5□□□□□ -0.73
USP15-208ENST00000548524 TBC1D13Q9NVG8 400 aa10.5□□□□□ -0.73
USP15-208ENST00000548524 KANSL3Q9P2N6 904 aa10.5□□□□□ -0.73
USP15-208ENST00000548524 LZTS1Q9Y250 596 aa10.5□□□□□ -0.73
USP15-208ENST00000548524 IPPQ9Y573 584 aa10.5□□□□□ -0.73
USP15-208ENST00000548524 PCDHGC5Q9Y5F6 944 aa10.5□□□□□ -0.73
USP15-208ENST00000548524 EVPLQ92817 2033 aa10.5□□□□□ -0.73
USP15-208ENST00000548524 CCDC169A6NNP5 214 aa10.49□□□□□ -0.73
USP15-208ENST00000548524 N4BP3O15049 544 aa10.49□□□□□ -0.73
USP15-208ENST00000548524 POMCP01189 267 aa10.49□□□□□ -0.73
USP15-208ENST00000548524 HSP90AA1P07900 732 aaKnown RBP10.49□□□□□ -0.73
USP15-208ENST00000548524 GTF2F1P35269 517 aaKnown RBP eCLIP10.49□□□□□ -0.73
USP15-208ENST00000548524 UBA7P41226 1012 aa10.49□□□□□ -0.73
USP15-208ENST00000548524 NDUFV1P49821 464 aa10.49□□□□□ -0.73
USP15-208ENST00000548524 EFNA5P52803 228 aa10.49□□□□□ -0.73
USP15-208ENST00000548524 PRSS12P56730 875 aa10.49□□□□□ -0.73
USP15-208ENST00000548524 ERVFC1P60507 584 aa10.49□□□□□ -0.73
USP15-208ENST00000548524 PRPF4BQ13523 1007 aaKnown RBP10.49□□□□□ -0.73
USP15-208ENST00000548524 FAM187BQ17R55 369 aa10.49□□□□□ -0.73
USP15-208ENST00000548524 PROX2Q3B8N5 592 aa10.49□□□□□ -0.73
USP15-208ENST00000548524 PUS10Q3MIT2 529 aaKnown RBP10.49□□□□□ -0.73
USP15-208ENST00000548524 HYIQ5T013 277 aa10.49□□□□□ -0.73
USP15-208ENST00000548524 PTCRAQ6ISU1 281 aaPredicted RBP10.49□□□□□ -0.73
USP15-208ENST00000548524 SLC27A1Q6PCB7 646 aa10.49□□□□□ -0.73
USP15-208ENST00000548524 ADGRD2Q7Z7M1 963 aa10.49□□□□□ -0.73
USP15-208ENST00000548524 CDR2LQ86X02 465 aaPredicted RBP10.49□□□□□ -0.73
USP15-208ENST00000548524 SLC39A11Q8N1S5 342 aa10.49□□□□□ -0.73
USP15-208ENST00000548524 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms