RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 N4BP1O75113 896 aaKnown RBP13.34□□□□□ -0.27
TRAFD1-205ENST00000548277 SOD2P04179 222 aa13.34□□□□□ -0.27
TRAFD1-205ENST00000548277 P4HBP07237 508 aaKnown RBP13.34□□□□□ -0.27
TRAFD1-205ENST00000548277 YWHABP31946 246 aaKnown RBP13.34□□□□□ -0.27
TRAFD1-205ENST00000548277 MLH1P40692 756 aa13.34□□□□□ -0.27
TRAFD1-205ENST00000548277 EVCP57679 992 aa13.34□□□□□ -0.27
TRAFD1-205ENST00000548277 EMC2Q15006 297 aa13.34□□□□□ -0.27
TRAFD1-205ENST00000548277 PIK3AP1Q6ZUJ8 805 aa13.34□□□□□ -0.27
TRAFD1-205ENST00000548277 KRT25Q7Z3Z0 450 aa13.34□□□□□ -0.27
TRAFD1-205ENST00000548277 FERMT3Q86UX7 667 aa13.34□□□□□ -0.27
TRAFD1-205ENST00000548277 CDR2LQ86X02 465 aaPredicted RBP13.34□□□□□ -0.27
TRAFD1-205ENST00000548277 TPH2Q8IWU9 490 aa13.34□□□□□ -0.27
TRAFD1-205ENST00000548277 COLGALT2Q8IYK4 626 aa13.34□□□□□ -0.27
TRAFD1-205ENST00000548277 KCNG4Q8TDN1 519 aa13.34□□□□□ -0.27
TRAFD1-205ENST00000548277 LXNQ9BS40 222 aa13.34□□□□□ -0.27
TRAFD1-205ENST00000548277 DHX33Q9H6R0 707 aaKnown RBP13.34□□□□□ -0.27
TRAFD1-205ENST00000548277 PIDD1Q9HB75 910 aa13.34□□□□□ -0.27
TRAFD1-205ENST00000548277 MARCH5Q9NX47 278 aa13.34□□□□□ -0.27
TRAFD1-205ENST00000548277 VAV3Q9UKW4 847 aa13.34□□□□□ -0.27
TRAFD1-205ENST00000548277 DUSP12Q9UNI6 340 aa13.34□□□□□ -0.27
TRAFD1-205ENST00000548277 IPPQ9Y573 584 aa13.34□□□□□ -0.27
TRAFD1-205ENST00000548277 CYP46A1Q9Y6A2 500 aa13.34□□□□□ -0.27
TRAFD1-205ENST00000548277 INO80B-WBP1J3KQ70 363 aa13.33□□□□□ -0.28
TRAFD1-205ENST00000548277 DKC1O60832 514 aaKnown RBP eCLIP13.33□□□□□ -0.28
TRAFD1-205ENST00000548277 REC8O95072 547 aa13.33□□□□□ -0.28
TRAFD1-205ENST00000548277 RPL17P18621 184 aaKnown RBP13.33□□□□□ -0.28
TRAFD1-205ENST00000548277 NCLP19338 710 aaKnown RBP13.33□□□□□ -0.28
TRAFD1-205ENST00000548277 AOC1P19801 751 aa13.33□□□□□ -0.28
TRAFD1-205ENST00000548277 SCNN1GP51170 649 aa13.33□□□□□ -0.28
TRAFD1-205ENST00000548277 PPP2R5CQ13362 524 aa13.33□□□□□ -0.28
TRAFD1-205ENST00000548277 EPHA7Q15375 998 aa13.33□□□□□ -0.28
TRAFD1-205ENST00000548277 ANGPT1Q15389 498 aa13.33□□□□□ -0.28
TRAFD1-205ENST00000548277 SPECC1Q5M775 1068 aa13.33□□□□□ -0.28
TRAFD1-205ENST00000548277 CPLX2Q6PUV4 134 aaKnown RBP13.33□□□□□ -0.28
TRAFD1-205ENST00000548277 MOXD1Q6UVY6 613 aa13.33□□□□□ -0.28
TRAFD1-205ENST00000548277 OTUD6AQ7L8S5 288 aa13.33□□□□□ -0.28
TRAFD1-205ENST00000548277 NEK8Q86SG6 692 aa13.33□□□□□ -0.28
TRAFD1-205ENST00000548277 POTEDQ86YR6 584 aa13.33□□□□□ -0.28
TRAFD1-205ENST00000548277 DTWD2Q8NBA8 298 aa13.33□□□□□ -0.28
TRAFD1-205ENST00000548277 DAGLBQ8NCG7 672 aa13.33□□□□□ -0.28
TRAFD1-205ENST00000548277 OXER1Q8TDS5 423 aa13.33□□□□□ -0.28
TRAFD1-205ENST00000548277 TCP11Q8WWU5 503 aa13.33□□□□□ -0.28
TRAFD1-205ENST00000548277 RIN2Q8WYP3 895 aaPredicted RBP13.33□□□□□ -0.28
TRAFD1-205ENST00000548277 RSPH1Q8WYR4 309 aa13.33□□□□□ -0.28
TRAFD1-205ENST00000548277 SMG7Q92540 1137 aaKnown RBP13.33□□□□□ -0.28
TRAFD1-205ENST00000548277 HAS1Q92839 578 aa13.33□□□□□ -0.28
TRAFD1-205ENST00000548277 ZNF274Q96GC6 653 aaPredicted RBP13.33□□□□□ -0.28
TRAFD1-205ENST00000548277 FAM20AQ96MK3 541 aa13.33□□□□□ -0.28
TRAFD1-205ENST00000548277 ZFP42Q96MM3 310 aa13.33□□□□□ -0.28
TRAFD1-205ENST00000548277 RPS6KC1Q96S38 1066 aa13.33□□□□□ -0.28
TRAFD1-205ENST00000548277 MYADMQ96S97 322 aa13.33□□□□□ -0.28
TRAFD1-205ENST00000548277 MTRQ99707 1265 aa13.33□□□□□ -0.28
TRAFD1-205ENST00000548277 HERC2P3Q9BVR0 1158 aa13.33□□□□□ -0.28
TRAFD1-205ENST00000548277 ZSWIM6Q9HCJ5 1215 aa13.33□□□□□ -0.28
TRAFD1-205ENST00000548277 KLK14Q9P0G3 267 aa13.33□□□□□ -0.28
TRAFD1-205ENST00000548277 CACNG4Q9UBN1 327 aa13.33□□□□□ -0.28
TRAFD1-205ENST00000548277 MYO15AQ9UKN7 3530 aa13.33□□□□□ -0.28
TRAFD1-205ENST00000548277 CNTNAP2Q9UHC6 1331 aa13.33□□□□□ -0.28
TRAFD1-205ENST00000548277 MIA3Q5JRA6 1907 aa13.33□□□□□ -0.28
TRAFD1-205ENST00000548277 RIF1Q5UIP0 2472 aaKnown RBP13.32□□□□□ -0.28
TRAFD1-205ENST00000548277 KRBA1A5PL33 1030 aa13.32□□□□□ -0.28
TRAFD1-205ENST00000548277 ARL5CA6NH57 179 aa13.32□□□□□ -0.28
TRAFD1-205ENST00000548277 ASAP2O43150 1006 aa13.32□□□□□ -0.28
TRAFD1-205ENST00000548277 GAS2O43903 313 aaKnown RBP13.32□□□□□ -0.28
TRAFD1-205ENST00000548277 GLUD1P00367 558 aa13.32□□□□□ -0.28
TRAFD1-205ENST00000548277 ADH1AP07327 375 aa13.32□□□□□ -0.28
TRAFD1-205ENST00000548277 AKAP5P24588 427 aa13.32□□□□□ -0.28
TRAFD1-205ENST00000548277 RFC5P40937 340 aa13.32□□□□□ -0.28
TRAFD1-205ENST00000548277 GLUD2P49448 558 aa13.32□□□□□ -0.28
TRAFD1-205ENST00000548277 EARS2Q5JPH6 523 aaKnown RBP13.32□□□□□ -0.28
TRAFD1-205ENST00000548277 KIAA0319Q5VV43 1072 aa13.32□□□□□ -0.28
TRAFD1-205ENST00000548277 C15orf39Q6ZRI6 1047 aa13.32□□□□□ -0.28
TRAFD1-205ENST00000548277 MAEAQ7L5Y9 396 aa13.32□□□□□ -0.28
TRAFD1-205ENST00000548277 C4orf19Q8IY42 314 aa13.32□□□□□ -0.28
TRAFD1-205ENST00000548277 CCDC105Q8IYK2 499 aa13.32□□□□□ -0.28
TRAFD1-205ENST00000548277 SLC44A3Q8N4M1 653 aa13.32□□□□□ -0.28
TRAFD1-205ENST00000548277 PHF20Q9BVI0 1012 aa13.32□□□□□ -0.28
TRAFD1-205ENST00000548277 TRIM6Q9C030 488 aaPredicted RBP13.32□□□□□ -0.28
TRAFD1-205ENST00000548277 KCNMB3Q9NPA1 279 aa13.32□□□□□ -0.28
TRAFD1-205ENST00000548277 PDRG1Q9NUG6 133 aa13.32□□□□□ -0.28
TRAFD1-205ENST00000548277 IGSF9Q9P2J2 1179 aa13.32□□□□□ -0.28
TRAFD1-205ENST00000548277 SSX2IPQ9Y2D8 614 aa13.32□□□□□ -0.28
TRAFD1-205ENST00000548277 CFAP54Q96N23 3096 aa13.32□□□□□ -0.28
TRAFD1-205ENST00000548277 CACNA1IQ9P0X4 2223 aa13.32□□□□□ -0.28
TRAFD1-205ENST00000548277 FAM205CA6NFA0 338 aa13.31□□□□□ -0.28
TRAFD1-205ENST00000548277 TSPAN1O60635 241 aa13.31□□□□□ -0.28
TRAFD1-205ENST00000548277 BAG4O95429 457 aaKnown RBP13.31□□□□□ -0.28
TRAFD1-205ENST00000548277 DCNP07585 359 aaKnown RBP13.31□□□□□ -0.28
TRAFD1-205ENST00000548277 NCBP1Q09161 790 aaKnown RBP13.31□□□□□ -0.28
TRAFD1-205ENST00000548277 SCRN1Q12765 414 aa13.31□□□□□ -0.28
TRAFD1-205ENST00000548277 GALNT17Q6IS24 598 aa13.31□□□□□ -0.28
TRAFD1-205ENST00000548277 GET4Q7L5D6 327 aaPredicted RBP13.31□□□□□ -0.28
TRAFD1-205ENST00000548277 EXOC8Q8IYI6 725 aa13.31□□□□□ -0.28
TRAFD1-205ENST00000548277 CNNM3Q8NE01 707 aa13.31□□□□□ -0.28
TRAFD1-205ENST00000548277 RTP3Q9BQQ7 232 aa13.31□□□□□ -0.28
TRAFD1-205ENST00000548277 COLEC11Q9BWP8 271 aa13.31□□□□□ -0.28
TRAFD1-205ENST00000548277 GPR62Q9BZJ7 368 aa13.31□□□□□ -0.28
TRAFD1-205ENST00000548277 WDR6Q9NNW5 1121 aaKnown RBP13.31□□□□□ -0.28
TRAFD1-205ENST00000548277 UBN1Q9NPG3 1134 aa13.31□□□□□ -0.28
TRAFD1-205ENST00000548277 PARP2Q9UGN5 583 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms