RNA–Protein interactions for RNA: ENST00000547872.1

CBX5-203, Transcript of chromobox 5, humanhuman

TSL 2

Gene CBX5, Length 745 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-203ENST00000547872 SARSP49591 514 aaKnown RBP5.56□□□□□ -1.52
CBX5-203ENST00000547872 IRF9Q00978 393 aa5.56□□□□□ -1.52
CBX5-203ENST00000547872 NOGQ13253 232 aa5.56□□□□□ -1.52
CBX5-203ENST00000547872 FZD5Q13467 585 aa5.56□□□□□ -1.52
CBX5-203ENST00000547872 SKIDA1Q1XH10 827 aa5.56□□□□□ -1.52
CBX5-203ENST00000547872 PRAMEF18Q5VWM3 479 aa5.56□□□□□ -1.52
CBX5-203ENST00000547872 PKN3Q6P5Z2 889 aa5.56□□□□□ -1.52
CBX5-203ENST00000547872 LCNL1Q6ZST4 164 aa5.56□□□□□ -1.52
CBX5-203ENST00000547872 PROSER1Q86XN7 944 aa5.56□□□□□ -1.52
CBX5-203ENST00000547872 SP8Q8IXZ3 490 aa5.56□□□□□ -1.52
CBX5-203ENST00000547872 ADGRG2Q8IZP9 1017 aa5.56□□□□□ -1.52
CBX5-203ENST00000547872 TTC5Q8N0Z6 440 aa5.56□□□□□ -1.52
CBX5-203ENST00000547872 SPATA6Q9NWH7 488 aaPredicted RBP5.56□□□□□ -1.52
CBX5-203ENST00000547872 RNF186Q9NXI6 227 aa5.56□□□□□ -1.52
CBX5-203ENST00000547872 PAPPA2Q9BXP8 1791 aa5.56□□□□□ -1.52
CBX5-203ENST00000547872 AKAP11Q9UKA4 1901 aa5.55□□□□□ -1.52
CBX5-203ENST00000547872 A0A1B0GTL3 188 aa5.55□□□□□ -1.52
CBX5-203ENST00000547872 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.55□□□□□ -1.52
CBX5-203ENST00000547872 PTPDC1A2A3K4 754 aa5.55□□□□□ -1.52
CBX5-203ENST00000547872 ZNF839A8K0R7 811 aa5.55□□□□□ -1.52
CBX5-203ENST00000547872 ADM5C9JUS6 153 aa5.55□□□□□ -1.52
CBX5-203ENST00000547872 FZD9O00144 591 aa5.55□□□□□ -1.52
CBX5-203ENST00000547872 PPIP5K2O43314 1243 aa5.55□□□□□ -1.52
CBX5-203ENST00000547872 SASH1O94885 1247 aa5.55□□□□□ -1.52
CBX5-203ENST00000547872 C4BPAP04003 597 aaKnown RBP5.55□□□□□ -1.52
CBX5-203ENST00000547872 BMP7P18075 431 aa5.55□□□□□ -1.52
CBX5-203ENST00000547872 RPL13P26373 211 aaKnown RBP5.55□□□□□ -1.52
CBX5-203ENST00000547872 PFKPQ01813 784 aa5.55□□□□□ -1.52
CBX5-203ENST00000547872 DLX2Q07687 328 aaPredicted RBP5.55□□□□□ -1.52
CBX5-203ENST00000547872 DBPQ10586 325 aaPredicted RBP5.55□□□□□ -1.52
CBX5-203ENST00000547872 TMEM132BQ14DG7 1078 aa5.55□□□□□ -1.52
CBX5-203ENST00000547872 RGMBQ6NW40 437 aa5.55□□□□□ -1.52
CBX5-203ENST00000547872 USP50Q70EL3 339 aaPredicted RBP5.55□□□□□ -1.52
CBX5-203ENST00000547872 AHI1Q8N157 1196 aa5.55□□□□□ -1.52
CBX5-203ENST00000547872 CARFQ8N187 725 aa5.55□□□□□ -1.52
CBX5-203ENST00000547872 PPM1KQ8N3J5 372 aa5.55□□□□□ -1.52
CBX5-203ENST00000547872 DTX3Q8N9I9 347 aa5.55□□□□□ -1.52
CBX5-203ENST00000547872 SLC39A2Q9NP94 309 aa5.55□□□□□ -1.52
CBX5-203ENST00000547872 ADARB2Q9NS39 739 aaKnown RBP5.55□□□□□ -1.52
CBX5-203ENST00000547872 ARHGAP20Q9P2F6 1191 aa5.55□□□□□ -1.52
CBX5-203ENST00000547872 ZKSCAN5Q9Y2L8 839 aa5.55□□□□□ -1.52
CBX5-203ENST00000547872 KIF24Q5T7B8 1368 aa5.55□□□□□ -1.52
CBX5-203ENST00000547872 WASHC2AQ641Q2 1341 aa5.54□□□□□ -1.52
CBX5-203ENST00000547872 H7C1D1 291 aa5.54□□□□□ -1.52
CBX5-203ENST00000547872 CBX4O00257 560 aa5.54□□□□□ -1.52
CBX5-203ENST00000547872 RAD17O75943 681 aa5.54□□□□□ -1.52
CBX5-203ENST00000547872 A1BGP04217 495 aa5.54□□□□□ -1.52
CBX5-203ENST00000547872 NPR1P16066 1061 aa5.54□□□□□ -1.52
CBX5-203ENST00000547872 GLRBP48167 497 aa5.54□□□□□ -1.52
CBX5-203ENST00000547872 KCNC1P48547 511 aa5.54□□□□□ -1.52
CBX5-203ENST00000547872 GMPSP49915 693 aaPredicted RBP5.54□□□□□ -1.52
CBX5-203ENST00000547872 MECP2P51608 486 aaKnown RBP5.54□□□□□ -1.52
CBX5-203ENST00000547872 GYS2P54840 703 aa5.54□□□□□ -1.52
CBX5-203ENST00000547872 HERVK_113P62684 666 aa5.54□□□□□ -1.52
CBX5-203ENST00000547872 ZNF174Q15697 407 aa5.54□□□□□ -1.52
CBX5-203ENST00000547872 TM4SF20Q53R12 229 aa5.54□□□□□ -1.52
CBX5-203ENST00000547872 SULT6B1Q6IMI4 303 aa5.54□□□□□ -1.52
CBX5-203ENST00000547872 FSTL4Q6MZW2 842 aa5.54□□□□□ -1.52
CBX5-203ENST00000547872 OTOP1Q7RTM1 612 aa5.54□□□□□ -1.52
CBX5-203ENST00000547872 RTKN2Q8IZC4 609 aa5.54□□□□□ -1.52
CBX5-203ENST00000547872 TP53I13Q8NBR0 393 aaPredicted RBP5.54□□□□□ -1.52
CBX5-203ENST00000547872 IGDCC4Q8TDY8 1250 aa5.54□□□□□ -1.52
CBX5-203ENST00000547872 DDX1Q92499 740 aaKnown RBP5.54□□□□□ -1.52
CBX5-203ENST00000547872 SPATA25Q9BR10 227 aa5.54□□□□□ -1.52
CBX5-203ENST00000547872 TARS2Q9BW92 718 aaKnown RBP5.54□□□□□ -1.52
CBX5-203ENST00000547872 PCIF1Q9H4Z3 704 aa5.54□□□□□ -1.52
CBX5-203ENST00000547872 ZCCHC4Q9H5U6 513 aa5.54□□□□□ -1.52
CBX5-203ENST00000547872 L2HGDHQ9H9P8 463 aa5.54□□□□□ -1.52
CBX5-203ENST00000547872 LUC7LQ9NQ29 371 aaKnown RBP5.54□□□□□ -1.52
CBX5-203ENST00000547872 B4GALT6Q9UBX8 382 aa5.54□□□□□ -1.52
CBX5-203ENST00000547872 ZFP69BQ9UJL9 534 aa5.54□□□□□ -1.52
CBX5-203ENST00000547872 SCAF8Q9UPN6 1271 aaKnown RBP5.54□□□□□ -1.52
CBX5-203ENST00000547872 WASF3Q9UPY6 502 aa5.54□□□□□ -1.52
CBX5-203ENST00000547872 B3GALT1Q9Y5Z6 326 aa5.54□□□□□ -1.52
CBX5-203ENST00000547872 UBR2Q8IWV8 1755 aa5.54□□□□□ -1.52
CBX5-203ENST00000547872 ADAMTS20P59510 1910 aa5.54□□□□□ -1.52
CBX5-203ENST00000547872 DDX3XO00571 662 aaKnown RBP eCLIP5.53□□□□□ -1.52
CBX5-203ENST00000547872 FOXP2O15409 715 aa5.53□□□□□ -1.52
CBX5-203ENST00000547872 TRIM13O60858 407 aa5.53□□□□□ -1.52
CBX5-203ENST00000547872 GAS7O60861 476 aa5.53□□□□□ -1.52
CBX5-203ENST00000547872 STARD3NLO95772 234 aa5.53□□□□□ -1.52
CBX5-203ENST00000547872 HMOX1P09601 288 aa5.53□□□□□ -1.52
CBX5-203ENST00000547872 MYCLP1P12525 358 aaPredicted RBP5.53□□□□□ -1.52
CBX5-203ENST00000547872 KIF11P52732 1056 aa5.53□□□□□ -1.52
CBX5-203ENST00000547872 SLURP1P55000 103 aa5.53□□□□□ -1.52
CBX5-203ENST00000547872 CNGB1Q14028 1251 aaPredicted RBP5.53□□□□□ -1.52
CBX5-203ENST00000547872 SART3Q15020 963 aaKnown RBP5.53□□□□□ -1.52
CBX5-203ENST00000547872 SEC23AQ15436 765 aa5.53□□□□□ -1.52
CBX5-203ENST00000547872 TBC1D10BQ4KMP7 808 aaPredicted RBP5.53□□□□□ -1.52
CBX5-203ENST00000547872 AMOTQ4VCS5 1084 aa5.53□□□□□ -1.52
CBX5-203ENST00000547872 PHF19Q5T6S3 580 aa5.53□□□□□ -1.52
CBX5-203ENST00000547872 TRMT10BQ6PF06 316 aaKnown RBP5.53□□□□□ -1.52
CBX5-203ENST00000547872 NGEFQ8N5V2 710 aa5.53□□□□□ -1.52
CBX5-203ENST00000547872 HIPK4Q8NE63 616 aa5.53□□□□□ -1.52
CBX5-203ENST00000547872 RPGRQ92834 1020 aaKnown RBP5.53□□□□□ -1.52
CBX5-203ENST00000547872 GBA2Q9HCG7 927 aaPredicted RBP5.53□□□□□ -1.52
CBX5-203ENST00000547872 GPRC5DQ9NZD1 345 aa5.53□□□□□ -1.52
CBX5-203ENST00000547872 POLKQ9UBT6 870 aa5.53□□□□□ -1.52
CBX5-203ENST00000547872 NIP7Q9Y221 180 aaKnown RBP eCLIP5.53□□□□□ -1.52
CBX5-203ENST00000547872 ABCC12Q96J65 1359 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms