RNA–Protein interactions for RNA: ENST00000547687.1

CHMP1A-204, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 1 (best)

Gene CHMP1A, Length 2,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-204ENST00000547687 ITGB8P26012 769 aa18.04■□□□□ 0.48
CHMP1A-204ENST00000547687 ZC2HC1CQ53FD0 456 aaPredicted RBP18.04■□□□□ 0.48
CHMP1A-204ENST00000547687 CCDC62Q6P9F0 684 aa18.04■□□□□ 0.48
CHMP1A-204ENST00000547687 FBXO38Q6PIJ6 1188 aa18.04■□□□□ 0.48
CHMP1A-204ENST00000547687 ZNF720Q7Z2F6 126 aa18.04■□□□□ 0.48
CHMP1A-204ENST00000547687 SCFD2Q8WU76 684 aa18.04■□□□□ 0.48
CHMP1A-204ENST00000547687 DEF6Q9H4E7 631 aa18.04■□□□□ 0.48
CHMP1A-204ENST00000547687 METTL14Q9HCE5 456 aaKnown RBP18.04■□□□□ 0.48
CHMP1A-204ENST00000547687 NLRC4Q9NPP4 1024 aa18.04■□□□□ 0.48
CHMP1A-204ENST00000547687 PRKAG2Q9UGJ0 569 aa18.04■□□□□ 0.48
CHMP1A-204ENST00000547687 IGKV6D-21A0A0A0MT36 114 aa18.03■□□□□ 0.48
CHMP1A-204ENST00000547687 RCCD1A6NED2 376 aa18.03■□□□□ 0.48
CHMP1A-204ENST00000547687 SLC16A3O15427 465 aaKnown RBP18.03■□□□□ 0.48
CHMP1A-204ENST00000547687 TGFB1I1O43294 461 aa18.03■□□□□ 0.48
CHMP1A-204ENST00000547687 AKAP3O75969 853 aa18.03■□□□□ 0.48
CHMP1A-204ENST00000547687 EPB41P11171 864 aaKnown RBP18.03■□□□□ 0.48
CHMP1A-204ENST00000547687 POLR2FP61218 127 aaKnown RBP18.03■□□□□ 0.48
CHMP1A-204ENST00000547687 STXBP4Q6ZWJ1 553 aa18.03■□□□□ 0.48
CHMP1A-204ENST00000547687 SEPT1Q8WYJ6 367 aa18.03■□□□□ 0.48
CHMP1A-204ENST00000547687 PCYT2Q99447 389 aa18.03■□□□□ 0.48
CHMP1A-204ENST00000547687 LACRTQ9GZZ8 138 aa18.03■□□□□ 0.48
CHMP1A-204ENST00000547687 GPRC5CQ9NQ84 441 aa18.03■□□□□ 0.48
CHMP1A-204ENST00000547687 SEPT9Q9UHD8 586 aaPredicted RBP18.03■□□□□ 0.48
CHMP1A-204ENST00000547687 ZNF263O14978 683 aa18.03■□□□□ 0.48
CHMP1A-204ENST00000547687 AFPP02771 609 aaKnown RBP18.03■□□□□ 0.48
CHMP1A-204ENST00000547687 KIF11P52732 1056 aa18.03■□□□□ 0.48
CHMP1A-204ENST00000547687 VAV2P52735 878 aa18.03■□□□□ 0.48
CHMP1A-204ENST00000547687 HSDL1Q3SXM5 330 aa18.03■□□□□ 0.48
CHMP1A-204ENST00000547687 XKR3Q5GH77 459 aa18.03■□□□□ 0.48
CHMP1A-204ENST00000547687 CELF3Q5SZQ8 465 aaKnown RBP18.03■□□□□ 0.48
CHMP1A-204ENST00000547687 CEP112Q8N8E3 955 aa18.03■□□□□ 0.48
CHMP1A-204ENST00000547687 EHBP1Q8NDI1 1231 aa18.03■□□□□ 0.48
CHMP1A-204ENST00000547687 SYN2Q92777 582 aaPredicted RBP18.03■□□□□ 0.48
CHMP1A-204ENST00000547687 UBE2OQ9C0C9 1292 aaKnown RBP18.03■□□□□ 0.48
CHMP1A-204ENST00000547687 LARSQ9P2J5 1176 aaKnown RBP18.03■□□□□ 0.48
CHMP1A-204ENST00000547687 AKR1B10O60218 316 aa18.02■□□□□ 0.48
CHMP1A-204ENST00000547687 LCA5LO95447 670 aa18.02■□□□□ 0.48
CHMP1A-204ENST00000547687 MYL3P08590 195 aa18.02■□□□□ 0.48
CHMP1A-204ENST00000547687 TCF7P36402 384 aaPredicted RBP18.02■□□□□ 0.48
CHMP1A-204ENST00000547687 KIF5AQ12840 1032 aa18.02■□□□□ 0.48
CHMP1A-204ENST00000547687 TTLL4Q14679 1199 aa18.02■□□□□ 0.48
CHMP1A-204ENST00000547687 C1orf53Q5VUE5 145 aa18.02■□□□□ 0.48
CHMP1A-204ENST00000547687 SFMBT2Q5VUG0 894 aa18.02■□□□□ 0.48
CHMP1A-204ENST00000547687 RSRC2Q7L4I2 434 aaKnown RBP18.02■□□□□ 0.48
CHMP1A-204ENST00000547687 SRGAP1Q7Z6B7 1085 aa18.02■□□□□ 0.48
CHMP1A-204ENST00000547687 KSR1Q8IVT5 923 aa18.02■□□□□ 0.48
CHMP1A-204ENST00000547687 DHX37Q8IY37 1157 aaKnown RBP18.02■□□□□ 0.48
CHMP1A-204ENST00000547687 TSGA10Q9BZW7 698 aa18.02■□□□□ 0.48
CHMP1A-204ENST00000547687 CYP26B1Q9NR63 512 aa18.02■□□□□ 0.48
CHMP1A-204ENST00000547687 PCDHB13Q9Y5F0 798 aa18.02■□□□□ 0.48
CHMP1A-204ENST00000547687 PCDHA13Q9Y5I0 950 aa18.02■□□□□ 0.48
CHMP1A-204ENST00000547687 UBE4BO95155 1302 aa18.02■□□□□ 0.48
CHMP1A-204ENST00000547687 CLTBP09497 229 aa18.01■□□□□ 0.47
CHMP1A-204ENST00000547687 H2AFXP16104 143 aaPredicted RBP18.01■□□□□ 0.47
CHMP1A-204ENST00000547687 CASP4P49662 377 aa18.01■□□□□ 0.47
CHMP1A-204ENST00000547687 CHMP4BP1P59074 171 aa18.01■□□□□ 0.47
CHMP1A-204ENST00000547687 FAAP100Q0VG06 881 aa18.01■□□□□ 0.47
CHMP1A-204ENST00000547687 MAPK8IP2Q13387 824 aaPredicted RBP18.01■□□□□ 0.47
CHMP1A-204ENST00000547687 NFIL3Q16649 462 aa18.01■□□□□ 0.47
CHMP1A-204ENST00000547687 FAM102BQ5T8I3 360 aa18.01■□□□□ 0.47
CHMP1A-204ENST00000547687 GOLGA1Q92805 767 aa18.01■□□□□ 0.47
CHMP1A-204ENST00000547687 BADQ92934 168 aa18.01■□□□□ 0.47
CHMP1A-204ENST00000547687 DRC1Q96MC2 740 aa18.01■□□□□ 0.47
CHMP1A-204ENST00000547687 GPR20Q99678 358 aa18.01■□□□□ 0.47
CHMP1A-204ENST00000547687 TIPINQ9BVW5 301 aa18.01■□□□□ 0.47
CHMP1A-204ENST00000547687 GRIN2DO15399 1336 aa18.01■□□□□ 0.47
CHMP1A-204ENST00000547687 ZMYM2Q9UBW7 1377 aa18.01■□□□□ 0.47
CHMP1A-204ENST00000547687 COL6A3P12111 3177 aa18.01■□□□□ 0.47
CHMP1A-204ENST00000547687 A0A0U1RQG5 324 aaPredicted RBP18.01■□□□□ 0.47
CHMP1A-204ENST00000547687 SSU72P8A0A1W2PR75 194 aa18.01■□□□□ 0.47
CHMP1A-204ENST00000547687 OATP04181 439 aa18.01■□□□□ 0.47
CHMP1A-204ENST00000547687 PLS3P13797 630 aa18.01■□□□□ 0.47
CHMP1A-204ENST00000547687 STAT5BP51692 787 aa18.01■□□□□ 0.47
CHMP1A-204ENST00000547687 NKX3-2P78367 333 aa18.01■□□□□ 0.47
CHMP1A-204ENST00000547687 APBA1Q02410 837 aa18.01■□□□□ 0.47
CHMP1A-204ENST00000547687 DCAF17Q5H9S7 520 aaPredicted RBP18.01■□□□□ 0.47
CHMP1A-204ENST00000547687 TEX35Q5T0J7 233 aa18.01■□□□□ 0.47
CHMP1A-204ENST00000547687 GPIHBP1Q8IV16 184 aa18.01■□□□□ 0.47
CHMP1A-204ENST00000547687 IFIH1Q9BYX4 1025 aaKnown RBP18.01■□□□□ 0.47
CHMP1A-204ENST00000547687 IKZF4Q9H2S9 585 aa18.01■□□□□ 0.47
CHMP1A-204ENST00000547687 MYO6Q9UM54 1294 aa18.01■□□□□ 0.47
CHMP1A-204ENST00000547687 Q9Y3F1 56 aa18.01■□□□□ 0.47
CHMP1A-204ENST00000547687 SCN10AQ9Y5Y9 1956 aa18.01■□□□□ 0.47
CHMP1A-204ENST00000547687 ARVCFO00192 962 aa18■□□□□ 0.47
CHMP1A-204ENST00000547687 SERPING1P05155 500 aa18■□□□□ 0.47
CHMP1A-204ENST00000547687 MTERF2Q49AM1 385 aa18■□□□□ 0.47
CHMP1A-204ENST00000547687 HGSNATQ68CP4 663 aa18■□□□□ 0.47
CHMP1A-204ENST00000547687 SPATA33Q96N06 139 aa18■□□□□ 0.47
CHMP1A-204ENST00000547687 LBHD1Q9BQE6 289 aaPredicted RBP18■□□□□ 0.47
CHMP1A-204ENST00000547687 STRA6Q9BX79 667 aa18■□□□□ 0.47
CHMP1A-204ENST00000547687 GANQ9H2C0 597 aa18■□□□□ 0.47
CHMP1A-204ENST00000547687 TMEM39AQ9NV64 488 aa18■□□□□ 0.47
CHMP1A-204ENST00000547687 PUF60Q9UHX1 559 aaKnown RBP18■□□□□ 0.47
CHMP1A-204ENST00000547687 DUSP10Q9Y6W6 482 aa18■□□□□ 0.47
CHMP1A-204ENST00000547687 K7ENM7 598 aa17.99■□□□□ 0.47
CHMP1A-204ENST00000547687 NOP56O00567 594 aaKnown RBP17.99■□□□□ 0.47
CHMP1A-204ENST00000547687 SOX1O00570 391 aaPredicted RBP17.99■□□□□ 0.47
CHMP1A-204ENST00000547687 PPP1R37O75864 691 aa17.99■□□□□ 0.47
CHMP1A-204ENST00000547687 DGAT1O75907 488 aa17.99■□□□□ 0.47
CHMP1A-204ENST00000547687 PSMC2P35998 433 aaKnown RBP17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms