RNA–Protein interactions for RNA: ENST00000547230.5

CACNB3-204, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3 BASIC

Gene CACNB3, Length 2,395 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-204ENST00000547230 RPUSD2Q8IZ73 545 aaKnown RBP13.64□□□□□ -0.23
CACNB3-204ENST00000547230 CD101Q93033 1021 aa13.64□□□□□ -0.23
CACNB3-204ENST00000547230 MKL1Q969V6 931 aa13.64□□□□□ -0.23
CACNB3-204ENST00000547230 HOOK2Q96ED9 719 aa13.64□□□□□ -0.23
CACNB3-204ENST00000547230 RBM17Q96I25 401 aaKnown RBP13.64□□□□□ -0.23
CACNB3-204ENST00000547230 DDX23Q9BUQ8 820 aaKnown RBP13.64□□□□□ -0.23
CACNB3-204ENST00000547230 STMN4Q9H169 189 aaPredicted RBP13.64□□□□□ -0.23
CACNB3-204ENST00000547230 UBE4BO95155 1302 aa13.63□□□□□ -0.23
CACNB3-204ENST00000547230 GGPS1O95749 300 aa13.63□□□□□ -0.23
CACNB3-204ENST00000547230 PSEN1P49768 467 aa13.63□□□□□ -0.23
CACNB3-204ENST00000547230 PDE6CP51160 858 aa13.63□□□□□ -0.23
CACNB3-204ENST00000547230 GPC5P78333 572 aa13.63□□□□□ -0.23
CACNB3-204ENST00000547230 MKRN4PQ13434 485 aaPredicted RBP13.63□□□□□ -0.23
CACNB3-204ENST00000547230 TCEAL1Q15170 157 aa13.63□□□□□ -0.23
CACNB3-204ENST00000547230 ZNF568Q3ZCX4 644 aa13.63□□□□□ -0.23
CACNB3-204ENST00000547230 TAOK1Q7L7X3 1001 aa13.63□□□□□ -0.23
CACNB3-204ENST00000547230 SLC13A5Q86YT5 568 aaPredicted RBP13.63□□□□□ -0.23
CACNB3-204ENST00000547230 SIAH1Q8IUQ4 282 aa13.63□□□□□ -0.23
CACNB3-204ENST00000547230 FAM178BQ8IXR5 827 aa13.63□□□□□ -0.23
CACNB3-204ENST00000547230 KIRREL3Q8IZU9 778 aa13.63□□□□□ -0.23
CACNB3-204ENST00000547230 CCDC17Q96LX7 622 aa13.63□□□□□ -0.23
CACNB3-204ENST00000547230 RPS6KC1Q96S38 1066 aa13.63□□□□□ -0.23
CACNB3-204ENST00000547230 PCDHB18PQ96TA0 734 aa13.63□□□□□ -0.23
CACNB3-204ENST00000547230 POP1Q99575 1024 aaKnown RBP13.63□□□□□ -0.23
CACNB3-204ENST00000547230 WDR18Q9BV38 432 aa13.63□□□□□ -0.23
CACNB3-204ENST00000547230 EBF2Q9HAK2 575 aa13.63□□□□□ -0.23
CACNB3-204ENST00000547230 TUFT1Q9NNX1 390 aa13.63□□□□□ -0.23
CACNB3-204ENST00000547230 UBE2TQ9NPD8 197 aaPredicted RBP13.63□□□□□ -0.23
CACNB3-204ENST00000547230 FGFR1OP2Q9NVK5 253 aa13.63□□□□□ -0.23
CACNB3-204ENST00000547230 L3MBTL1Q9Y468 752 aa13.63□□□□□ -0.23
CACNB3-204ENST00000547230 EXOC3O60645 756 aa13.63□□□□□ -0.23
CACNB3-204ENST00000547230 ECM2O94769 699 aaPredicted RBP13.63□□□□□ -0.23
CACNB3-204ENST00000547230 NQO1P15559 274 aaKnown RBP13.63□□□□□ -0.23
CACNB3-204ENST00000547230 ZNF131P52739 623 aa13.63□□□□□ -0.23
CACNB3-204ENST00000547230 MYO1EQ12965 1108 aa13.63□□□□□ -0.23
CACNB3-204ENST00000547230 CRELD2Q6UXH1 353 aaPredicted RBP13.63□□□□□ -0.23
CACNB3-204ENST00000547230 BTBD6Q96KE9 485 aa13.63□□□□□ -0.23
CACNB3-204ENST00000547230 CDC42EP4Q9H3Q1 356 aaKnown RBP13.63□□□□□ -0.23
CACNB3-204ENST00000547230 AAASQ9NRG9 546 aa13.63□□□□□ -0.23
CACNB3-204ENST00000547230 NYAP2Q9P242 653 aa13.63□□□□□ -0.23
CACNB3-204ENST00000547230 WRAP73Q9P2S5 460 aaPredicted RBP13.63□□□□□ -0.23
CACNB3-204ENST00000547230 USP15Q9Y4E8 981 aaPredicted RBP13.63□□□□□ -0.23
CACNB3-204ENST00000547230 EMSYQ7Z589 1322 aa13.62□□□□□ -0.23
CACNB3-204ENST00000547230 PASKQ96RG2 1323 aa13.62□□□□□ -0.23
CACNB3-204ENST00000547230 LRRC37AA6NMS7 1700 aa13.62□□□□□ -0.23
CACNB3-204ENST00000547230 FOXO6A8MYZ6 492 aa13.62□□□□□ -0.23
CACNB3-204ENST00000547230 TCP11X1B4DZS4 312 aa13.62□□□□□ -0.23
CACNB3-204ENST00000547230 TP73O15350 636 aa13.62□□□□□ -0.23
CACNB3-204ENST00000547230 RFX1P22670 979 aa13.62□□□□□ -0.23
CACNB3-204ENST00000547230 GBP2P32456 591 aaPredicted RBP13.62□□□□□ -0.23
CACNB3-204ENST00000547230 ALDH5A1P51649 535 aaPredicted RBP13.62□□□□□ -0.23
CACNB3-204ENST00000547230 ODR4Q5SWX8 454 aa13.62□□□□□ -0.23
CACNB3-204ENST00000547230 VSTM1Q6UX27 236 aa13.62□□□□□ -0.23
CACNB3-204ENST00000547230 CYFIP1Q7L576 1253 aa13.62□□□□□ -0.23
CACNB3-204ENST00000547230 OTOP1Q7RTM1 612 aa13.62□□□□□ -0.23
CACNB3-204ENST00000547230 AGAP11Q8TF27 550 aa13.62□□□□□ -0.23
CACNB3-204ENST00000547230 DYDC1Q8WWB3 177 aa13.62□□□□□ -0.23
CACNB3-204ENST00000547230 KAT5Q92993 513 aa13.62□□□□□ -0.23
CACNB3-204ENST00000547230 ECT2Q9H8V3 914 aa13.62□□□□□ -0.23
CACNB3-204ENST00000547230 ZNFX1Q9P2E3 1918 aaKnown RBP13.62□□□□□ -0.23
CACNB3-204ENST00000547230 SPATA31A6Q5VVP1 1343 aa13.62□□□□□ -0.23
CACNB3-204ENST00000547230 TMEM120BA0PK00 339 aa13.61□□□□□ -0.23
CACNB3-204ENST00000547230 ACSL3O95573 720 aa13.61□□□□□ -0.23
CACNB3-204ENST00000547230 CYP3A4P08684 503 aa13.61□□□□□ -0.23
CACNB3-204ENST00000547230 BCRP11274 1271 aa13.61□□□□□ -0.23
CACNB3-204ENST00000547230 CHRNB2P17787 502 aa13.61□□□□□ -0.23
CACNB3-204ENST00000547230 CACNB3P54284 484 aa13.61□□□□□ -0.23
CACNB3-204ENST00000547230 IKQ13123 557 aaPredicted RBP13.61□□□□□ -0.23
CACNB3-204ENST00000547230 ZNF268Q14587 947 aaPredicted RBP13.61□□□□□ -0.23
CACNB3-204ENST00000547230 GALNTL6Q49A17 601 aa13.61□□□□□ -0.23
CACNB3-204ENST00000547230 SYDE2Q5VT97 1194 aa13.61□□□□□ -0.23
CACNB3-204ENST00000547230 APOBEC3HQ6NTF7 200 aaKnown RBP13.61□□□□□ -0.23
CACNB3-204ENST00000547230 RUNDC3BQ96NL0 473 aa13.61□□□□□ -0.23
CACNB3-204ENST00000547230 WNT8AQ9H1J5 351 aa13.61□□□□□ -0.23
CACNB3-204ENST00000547230 TAOK3Q9H2K8 898 aa13.61□□□□□ -0.23
CACNB3-204ENST00000547230 MLXIPLQ9NP71 852 aa13.61□□□□□ -0.23
CACNB3-204ENST00000547230 HOMER3Q9NSC5 361 aa13.61□□□□□ -0.23
CACNB3-204ENST00000547230 CTNNAL1Q9UBT7 734 aa13.61□□□□□ -0.23
CACNB3-204ENST00000547230 SEL1LQ9UBV2 794 aa13.61□□□□□ -0.23
CACNB3-204ENST00000547230 TISP43B9A030 160 aa13.61□□□□□ -0.23
CACNB3-204ENST00000547230 F5H6K3 240 aa13.61□□□□□ -0.23
CACNB3-204ENST00000547230 IGF2BP3O00425 579 aaKnown RBP eCLIP13.61□□□□□ -0.23
CACNB3-204ENST00000547230 RTN2O75298 545 aa13.61□□□□□ -0.23
CACNB3-204ENST00000547230 BBOX1O75936 387 aa13.61□□□□□ -0.23
CACNB3-204ENST00000547230 MTA2O94776 668 aa13.61□□□□□ -0.23
CACNB3-204ENST00000547230 SGPL1O95470 568 aa13.61□□□□□ -0.23
CACNB3-204ENST00000547230 ALADP13716 330 aa13.61□□□□□ -0.23
CACNB3-204ENST00000547230 PPP3CAQ08209 521 aa13.61□□□□□ -0.23
CACNB3-204ENST00000547230 RRP1BQ14684 758 aaKnown RBP13.61□□□□□ -0.23
CACNB3-204ENST00000547230 LLGL1Q15334 1064 aa13.61□□□□□ -0.23
CACNB3-204ENST00000547230 CERKLQ49MI3 558 aaPredicted RBP13.61□□□□□ -0.23
CACNB3-204ENST00000547230 FAM182BQ5T319 152 aa13.61□□□□□ -0.23
CACNB3-204ENST00000547230 LRCH2Q5VUJ6 765 aa13.61□□□□□ -0.23
CACNB3-204ENST00000547230 FAM196AQ6ZSG2 479 aa13.61□□□□□ -0.23
CACNB3-204ENST00000547230 NSMCE1Q8WV22 266 aa13.61□□□□□ -0.23
CACNB3-204ENST00000547230 ARHGEF2Q92974 986 aaKnown RBP13.61□□□□□ -0.23
CACNB3-204ENST00000547230 L3MBTL3Q96JM7 780 aaPredicted RBP13.61□□□□□ -0.23
CACNB3-204ENST00000547230 ROPN1BQ9BZX4 212 aaPredicted RBP13.61□□□□□ -0.23
CACNB3-204ENST00000547230 ROPN1Q9HAT0 212 aaPredicted RBP13.61□□□□□ -0.23
CACNB3-204ENST00000547230 MTUS1Q9ULD2 1270 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms