RNA–Protein interactions for RNA: ENST00000546433.5

SSH1-203, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 5,621 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-203ENST00000546433 TRIM72Q6ZMU5 477 aa11.1□□□□□ -0.63
SSH1-203ENST00000546433 FBXO33Q7Z6M2 555 aa11.1□□□□□ -0.63
SSH1-203ENST00000546433 MCUQ8NE86 351 aa11.1□□□□□ -0.63
SSH1-203ENST00000546433 VPS39Q96JC1 886 aa11.1□□□□□ -0.63
SSH1-203ENST00000546433 HINFPQ9BQA5 517 aa11.1□□□□□ -0.63
SSH1-203ENST00000546433 CYP26B1Q9NR63 512 aa11.1□□□□□ -0.63
SSH1-203ENST00000546433 SLC8A2Q9UPR5 921 aa11.1□□□□□ -0.63
SSH1-203ENST00000546433 GOLGA8IPA6NC78 632 aa11.1□□□□□ -0.63
SSH1-203ENST00000546433 GOLGA8JA6NMD2 632 aa11.1□□□□□ -0.63
SSH1-203ENST00000546433 SPARCL1Q14515 664 aa11.1□□□□□ -0.63
SSH1-203ENST00000546433 DSTYKQ6XUX3 929 aa11.1□□□□□ -0.63
SSH1-203ENST00000546433 NDUFAF2Q8N183 169 aa11.1□□□□□ -0.63
SSH1-203ENST00000546433 GOLPH3LQ9H4A5 285 aa11.1□□□□□ -0.63
SSH1-203ENST00000546433 PXDNLA1KZ92 1463 aa11.1□□□□□ -0.63
SSH1-203ENST00000546433 LRRC53A6NM62 1247 aa11.1□□□□□ -0.63
SSH1-203ENST00000546433 CLDN3O15551 220 aa11.1□□□□□ -0.63
SSH1-203ENST00000546433 SRGAP2CP0DJJ0 459 aa11.1□□□□□ -0.63
SSH1-203ENST00000546433 PRCPP42785 496 aa11.1□□□□□ -0.63
SSH1-203ENST00000546433 KYAT1Q16773 422 aa11.1□□□□□ -0.63
SSH1-203ENST00000546433 TOGARAM2Q6ZUX3 1019 aa11.1□□□□□ -0.63
SSH1-203ENST00000546433 NFU1Q9UMS0 254 aa11.1□□□□□ -0.63
SSH1-203ENST00000546433 ZRANB2O95218 330 aaKnown RBP eCLIP11.09□□□□□ -0.63
SSH1-203ENST00000546433 TXNP10599 105 aaKnown RBP11.09□□□□□ -0.63
SSH1-203ENST00000546433 CA4P22748 312 aa11.09□□□□□ -0.63
SSH1-203ENST00000546433 KCNB1Q14721 858 aa11.09□□□□□ -0.63
SSH1-203ENST00000546433 PTPN21Q16825 1174 aa11.09□□□□□ -0.63
SSH1-203ENST00000546433 SPDL1Q96EA4 605 aa11.09□□□□□ -0.63
SSH1-203ENST00000546433 ANAPC7Q9UJX3 599 aa11.09□□□□□ -0.63
SSH1-203ENST00000546433 PLAAQ9Y263 795 aa11.09□□□□□ -0.63
SSH1-203ENST00000546433 KRT38O76015 456 aa11.09□□□□□ -0.63
SSH1-203ENST00000546433 PNMA6AP0CW24 399 aaPredicted RBP11.09□□□□□ -0.63
SSH1-203ENST00000546433 CYP2D6P10635 497 aa11.09□□□□□ -0.63
SSH1-203ENST00000546433 KCNH2Q12809 1159 aa11.09□□□□□ -0.63
SSH1-203ENST00000546433 SCARA5Q6ZMJ2 495 aa11.09□□□□□ -0.63
SSH1-203ENST00000546433 THEM5Q8N1Q8 247 aa11.09□□□□□ -0.63
SSH1-203ENST00000546433 FAF2Q96CS3 445 aa11.09□□□□□ -0.63
SSH1-203ENST00000546433 MTRQ99707 1265 aa11.09□□□□□ -0.63
SSH1-203ENST00000546433 TIPINQ9BVW5 301 aa11.09□□□□□ -0.63
SSH1-203ENST00000546433 GCOM2Q9BZD3 368 aaPredicted RBP11.09□□□□□ -0.63
SSH1-203ENST00000546433 UNCXA6NJT0 531 aa11.09□□□□□ -0.63
SSH1-203ENST00000546433 DYNC1LI2O43237 492 aaPredicted RBP11.09□□□□□ -0.63
SSH1-203ENST00000546433 SKIP12755 728 aa11.09□□□□□ -0.63
SSH1-203ENST00000546433 IL1R1P14778 569 aa11.09□□□□□ -0.63
SSH1-203ENST00000546433 ESRRGP62508 458 aa11.09□□□□□ -0.63
SSH1-203ENST00000546433 DGKDQ16760 1214 aa11.09□□□□□ -0.63
SSH1-203ENST00000546433 RASIP1Q5U651 963 aa11.09□□□□□ -0.63
SSH1-203ENST00000546433 NLRP4Q96MN2 994 aa11.09□□□□□ -0.63
SSH1-203ENST00000546433 FAM187AA6NFU0 413 aa11.09□□□□□ -0.63
SSH1-203ENST00000546433 POTEMA6NI47 508 aa11.09□□□□□ -0.63
SSH1-203ENST00000546433 CLGNO14967 610 aa11.09□□□□□ -0.63
SSH1-203ENST00000546433 GSTA4O15217 222 aa11.09□□□□□ -0.63
SSH1-203ENST00000546433 MAP3K7O43318 606 aa11.09□□□□□ -0.63
SSH1-203ENST00000546433 SLCO1A2P46721 670 aa11.09□□□□□ -0.63
SSH1-203ENST00000546433 PAPOLAP51003 745 aaKnown RBP11.09□□□□□ -0.63
SSH1-203ENST00000546433 CATSPER4Q7RTX7 472 aa11.09□□□□□ -0.63
SSH1-203ENST00000546433 CRLF3Q8IUI8 442 aa11.09□□□□□ -0.63
SSH1-203ENST00000546433 RYBPQ8N488 228 aaPredicted RBP11.09□□□□□ -0.63
SSH1-203ENST00000546433 FAM49AQ9H0Q0 323 aaPredicted RBP11.09□□□□□ -0.63
SSH1-203ENST00000546433 DDX56Q9NY93 547 aaKnown RBP11.09□□□□□ -0.63
SSH1-203ENST00000546433 NYAP2Q9P242 653 aa11.09□□□□□ -0.63
SSH1-203ENST00000546433 LTBP3Q9NS15 1303 aa11.08□□□□□ -0.63
SSH1-203ENST00000546433 GNGT2O14610 69 aa11.08□□□□□ -0.64
SSH1-203ENST00000546433 ATP2C1P98194 919 aaPredicted RBP11.08□□□□□ -0.64
SSH1-203ENST00000546433 ART3Q13508 389 aa11.08□□□□□ -0.64
SSH1-203ENST00000546433 GNASQ5JWF2 1037 aa11.08□□□□□ -0.64
SSH1-203ENST00000546433 FBXO38Q6PIJ6 1188 aa11.08□□□□□ -0.64
SSH1-203ENST00000546433 VCPKMTQ9H867 229 aa11.08□□□□□ -0.64
SSH1-203ENST00000546433 TBK1Q9UHD2 729 aa11.08□□□□□ -0.64
SSH1-203ENST00000546433 KIAA0391O15091 583 aaKnown RBP11.08□□□□□ -0.64
SSH1-203ENST00000546433 ESRRAP11474 423 aaPredicted RBP11.08□□□□□ -0.64
SSH1-203ENST00000546433 CHRNA3P32297 505 aa11.08□□□□□ -0.64
SSH1-203ENST00000546433 QARSP47897 775 aaKnown RBP11.08□□□□□ -0.64
SSH1-203ENST00000546433 GPC3P51654 580 aa11.08□□□□□ -0.64
SSH1-203ENST00000546433 OSTNP61366 133 aa11.08□□□□□ -0.64
SSH1-203ENST00000546433 DEUP1Q05D60 604 aa11.08□□□□□ -0.64
SSH1-203ENST00000546433 TRIP13Q15645 432 aaPredicted RBP11.08□□□□□ -0.64
SSH1-203ENST00000546433 ZNF699Q32M78 642 aa11.08□□□□□ -0.64
SSH1-203ENST00000546433 OR6B3Q8NGW1 331 aa11.08□□□□□ -0.64
SSH1-203ENST00000546433 PPWD1Q96BP3 646 aaKnown RBP11.08□□□□□ -0.64
SSH1-203ENST00000546433 MYCBPQ99417 103 aaPredicted RBP11.08□□□□□ -0.64
SSH1-203ENST00000546433 IP6K2Q9UHH9 426 aa11.08□□□□□ -0.64
SSH1-203ENST00000546433 AMHP03971 560 aa11.08□□□□□ -0.64
SSH1-203ENST00000546433 VAMP7P51809 220 aa11.08□□□□□ -0.64
SSH1-203ENST00000546433 SLC7A5Q01650 507 aa11.08□□□□□ -0.64
SSH1-203ENST00000546433 TAP1Q03518 808 aa11.08□□□□□ -0.64
SSH1-203ENST00000546433 PIGOQ8TEQ8 1089 aa11.08□□□□□ -0.64
SSH1-203ENST00000546433 SEPT8Q92599 483 aa11.08□□□□□ -0.64
SSH1-203ENST00000546433 ZKSCAN4Q969J2 545 aaPredicted RBP11.08□□□□□ -0.64
SSH1-203ENST00000546433 CEP95Q96GE4 821 aa11.08□□□□□ -0.64
SSH1-203ENST00000546433 WNT8AQ9H1J5 351 aa11.08□□□□□ -0.64
SSH1-203ENST00000546433 ZWILCHQ9H900 591 aa11.08□□□□□ -0.64
SSH1-203ENST00000546433 MAP3K20Q9NYL2 800 aaKnown RBP11.08□□□□□ -0.64
SSH1-203ENST00000546433 CAP2P40123 477 aa11.08□□□□□ -0.64
SSH1-203ENST00000546433 BACE1P56817 501 aa11.08□□□□□ -0.64
SSH1-203ENST00000546433 NBPF9Q3BBW0 867 aa11.08□□□□□ -0.64
SSH1-203ENST00000546433 ANKRD23Q86SG2 305 aa11.08□□□□□ -0.64
SSH1-203ENST00000546433 BEST2Q8NFU1 509 aa11.08□□□□□ -0.64
SSH1-203ENST00000546433 NEDD1Q8NHV4 660 aa11.08□□□□□ -0.64
SSH1-203ENST00000546433 HSPH1Q92598 858 aa11.08□□□□□ -0.64
SSH1-203ENST00000546433 DYDC2Q96IM9 177 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms