RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 MOXD1Q6UVY6 613 aa15.25■□□□□ 0.03
SRP54-202ENST00000546080 SLC13A5Q86YT5 568 aaPredicted RBP15.25■□□□□ 0.03
SRP54-202ENST00000546080 LINC00116Q8NCU8 138 aa15.25■□□□□ 0.03
SRP54-202ENST00000546080 FBF1Q8TES7 1133 aa15.25■□□□□ 0.03
SRP54-202ENST00000546080 SLC20A1Q8WUM9 679 aa15.25■□□□□ 0.03
SRP54-202ENST00000546080 WNT8AQ9H1J5 351 aa15.25■□□□□ 0.03
SRP54-202ENST00000546080 RABGAP1Q9Y3P9 1069 aa15.25■□□□□ 0.03
SRP54-202ENST00000546080 COL5A3P25940 1745 aaPredicted RBP15.24■□□□□ 0.03
SRP54-202ENST00000546080 C10orf71Q711Q0 1435 aa15.24■□□□□ 0.03
SRP54-202ENST00000546080 TCRBV7S2A1N4TA0A589 114 aa15.24■□□□□ 0.03
SRP54-202ENST00000546080 SFI1A8K8P3 1242 aa15.24■□□□□ 0.03
SRP54-202ENST00000546080 FAM13AO94988 1023 aa15.24■□□□□ 0.03
SRP54-202ENST00000546080 PYGMP11217 842 aa15.24■□□□□ 0.03
SRP54-202ENST00000546080 BRAFP15056 766 aa15.24■□□□□ 0.03
SRP54-202ENST00000546080 TM4SF1P30408 202 aa15.24■□□□□ 0.03
SRP54-202ENST00000546080 PEX5P50542 639 aa15.24■□□□□ 0.03
SRP54-202ENST00000546080 ARHGAP4P98171 946 aa15.24■□□□□ 0.03
SRP54-202ENST00000546080 NFIL3Q16649 462 aa15.24■□□□□ 0.03
SRP54-202ENST00000546080 C11orf91Q3C1V1 193 aa15.24■□□□□ 0.03
SRP54-202ENST00000546080 ZNF568Q3ZCX4 644 aa15.24■□□□□ 0.03
SRP54-202ENST00000546080 RNF43Q68DV7 783 aa15.24■□□□□ 0.03
SRP54-202ENST00000546080 SMIM5Q71RC9 77 aa15.24■□□□□ 0.03
SRP54-202ENST00000546080 MIGA2Q7L4E1 593 aa15.24■□□□□ 0.03
SRP54-202ENST00000546080 KCNV2Q8TDN2 545 aa15.24■□□□□ 0.03
SRP54-202ENST00000546080 CTNNAL1Q9UBT7 734 aa15.24■□□□□ 0.03
SRP54-202ENST00000546080 FRMD4BQ9Y2L6 1034 aa15.24■□□□□ 0.03
SRP54-202ENST00000546080 TBX3O15119 743 aa15.24■□□□□ 0.03
SRP54-202ENST00000546080 TOM1O60784 492 aa15.24■□□□□ 0.03
SRP54-202ENST00000546080 HIP1RO75146 1068 aa15.24■□□□□ 0.03
SRP54-202ENST00000546080 GH1P01241 217 aa15.24■□□□□ 0.03
SRP54-202ENST00000546080 NMT1P30419 496 aaKnown RBP15.24■□□□□ 0.03
SRP54-202ENST00000546080 CYP2J2P51589 502 aa15.24■□□□□ 0.03
SRP54-202ENST00000546080 PICALMQ13492 652 aa15.24■□□□□ 0.03
SRP54-202ENST00000546080 TPTE2Q6XPS3 522 aa15.24■□□□□ 0.03
SRP54-202ENST00000546080 RNF207Q6ZRF8 634 aa15.24■□□□□ 0.03
SRP54-202ENST00000546080 SLF2Q8IX21 1173 aa15.24■□□□□ 0.03
SRP54-202ENST00000546080 MORC4Q8TE76 937 aa15.24■□□□□ 0.03
SRP54-202ENST00000546080 ANKRD27Q96NW4 1050 aa15.24■□□□□ 0.03
SRP54-202ENST00000546080 ETNK1Q9HBU6 452 aa15.24■□□□□ 0.03
SRP54-202ENST00000546080 TXLNGQ9NUQ3 528 aa15.24■□□□□ 0.03
SRP54-202ENST00000546080 PCDHA1Q9Y5I3 950 aa15.24■□□□□ 0.03
SRP54-202ENST00000546080 FOXN3O00409 490 aaPredicted RBP15.23■□□□□ 0.03
SRP54-202ENST00000546080 UNC5CO95185 931 aa15.23■□□□□ 0.03
SRP54-202ENST00000546080 EYA4O95677 639 aa15.23■□□□□ 0.03
SRP54-202ENST00000546080 BCRP11274 1271 aa15.23■□□□□ 0.03
SRP54-202ENST00000546080 RFX1P22670 979 aa15.23■□□□□ 0.03
SRP54-202ENST00000546080 CCDC15Q0P6D6 951 aa15.23■□□□□ 0.03
SRP54-202ENST00000546080 COG2Q14746 738 aa15.23■□□□□ 0.03
SRP54-202ENST00000546080 TCEAL1Q15170 157 aa15.23■□□□□ 0.03
SRP54-202ENST00000546080 ARHGEF18Q6ZSZ5 1173 aa15.23■□□□□ 0.03
SRP54-202ENST00000546080 INTS8Q75QN2 995 aaKnown RBP15.23■□□□□ 0.03
SRP54-202ENST00000546080 MYCT1Q8N699 235 aa15.23■□□□□ 0.03
SRP54-202ENST00000546080 MAGEB18Q96M61 343 aa15.23■□□□□ 0.03
SRP54-202ENST00000546080 FAM167BQ9BTA0 163 aa15.23■□□□□ 0.03
SRP54-202ENST00000546080 WHRNQ9P202 907 aa15.23■□□□□ 0.03
SRP54-202ENST00000546080 SPOPO43791 374 aa15.22■□□□□ 0.03
SRP54-202ENST00000546080 SARNPP82979 210 aaKnown RBP15.22■□□□□ 0.03
SRP54-202ENST00000546080 KRT17Q04695 432 aa15.22■□□□□ 0.03
SRP54-202ENST00000546080 GABPAQ06546 454 aa15.22■□□□□ 0.03
SRP54-202ENST00000546080 MGAT5Q09328 741 aa15.22■□□□□ 0.03
SRP54-202ENST00000546080 AP3B2Q13367 1082 aa15.22■□□□□ 0.03
SRP54-202ENST00000546080 MKRN4PQ13434 485 aaPredicted RBP15.22■□□□□ 0.03
SRP54-202ENST00000546080 ACVR2BQ13705 512 aa15.22■□□□□ 0.03
SRP54-202ENST00000546080 QRICH1Q2TAL8 776 aa15.22■□□□□ 0.03
SRP54-202ENST00000546080 ZC2HC1CQ53FD0 456 aaPredicted RBP15.22■□□□□ 0.03
SRP54-202ENST00000546080 PHLDB3Q6NSJ2 640 aa15.22■□□□□ 0.03
SRP54-202ENST00000546080 CGB2Q6NT52 195 aa15.22■□□□□ 0.03
SRP54-202ENST00000546080 HS2ST1Q7LGA3 356 aa15.22■□□□□ 0.03
SRP54-202ENST00000546080 TEX9Q8N6V9 391 aa15.22■□□□□ 0.03
SRP54-202ENST00000546080 C12orf50Q8NA57 414 aaPredicted RBP15.22■□□□□ 0.03
SRP54-202ENST00000546080 GRAMD1AQ96CP6 724 aa15.22■□□□□ 0.03
SRP54-202ENST00000546080 NAF1Q96HR8 494 aaKnown RBP15.22■□□□□ 0.03
SRP54-202ENST00000546080 OSBPL1AQ9BXW6 950 aa15.22■□□□□ 0.03
SRP54-202ENST00000546080 ARHGEF10LQ9HCE6 1279 aa15.22■□□□□ 0.03
SRP54-202ENST00000546080 AAASQ9NRG9 546 aa15.22■□□□□ 0.03
SRP54-202ENST00000546080 NKIRAS1Q9NYS0 192 aa15.22■□□□□ 0.03
SRP54-202ENST00000546080 ASIC3Q9UHC3 531 aa15.22■□□□□ 0.03
SRP54-202ENST00000546080 THRAP3Q9Y2W1 955 aaKnown RBP15.22■□□□□ 0.03
SRP54-202ENST00000546080 FOXO6A8MYZ6 492 aa15.22■□□□□ 0.03
SRP54-202ENST00000546080 UBAP1LF5GYI3 381 aa15.22■□□□□ 0.03
SRP54-202ENST00000546080 STRN3Q13033 797 aa15.22■□□□□ 0.03
SRP54-202ENST00000546080 NFIXQ14938 502 aa15.22■□□□□ 0.03
SRP54-202ENST00000546080 MTFR1Q15390 333 aa15.22■□□□□ 0.03
SRP54-202ENST00000546080 SIX1Q15475 284 aaPredicted RBP15.22■□□□□ 0.03
SRP54-202ENST00000546080 Q4G0T1 1027 aa15.22■□□□□ 0.03
SRP54-202ENST00000546080 RINT1Q6NUQ1 792 aa15.22■□□□□ 0.03
SRP54-202ENST00000546080 ECHDC2Q86YB7 292 aa15.22■□□□□ 0.03
SRP54-202ENST00000546080 RPUSD2Q8IZ73 545 aaKnown RBP15.22■□□□□ 0.03
SRP54-202ENST00000546080 CEP120Q8N960 986 aa15.22■□□□□ 0.03
SRP54-202ENST00000546080 POP1Q99575 1024 aaKnown RBP15.22■□□□□ 0.03
SRP54-202ENST00000546080 CDCA7Q9BWT1 371 aaPredicted RBP15.22■□□□□ 0.03
SRP54-202ENST00000546080 DNAJC18Q9H819 358 aa15.22■□□□□ 0.03
SRP54-202ENST00000546080 CD209Q9NNX6 404 aa15.22■□□□□ 0.03
SRP54-202ENST00000546080 SRP68Q9UHB9 627 aaKnown RBP15.22■□□□□ 0.03
SRP54-202ENST00000546080 CHORDC1Q9UHD1 332 aaPredicted RBP15.22■□□□□ 0.03
SRP54-202ENST00000546080 RGL2O15211 777 aa15.21■□□□□ 0.03
SRP54-202ENST00000546080 DLATP10515 647 aaKnown RBP15.21■□□□□ 0.03
SRP54-202ENST00000546080 CHKAP35790 457 aa15.21■□□□□ 0.03
SRP54-202ENST00000546080 ABL2P42684 1182 aa15.21■□□□□ 0.03
SRP54-202ENST00000546080 MPP2Q14168 576 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms