RNA–Protein interactions for RNA: ENST00000545807.6

NECAP1-208, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,113 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-208ENST00000545807 TNIP1Q15025 636 aa7.18□□□□□ -1.26
NECAP1-208ENST00000545807 SPDYE2Q495Y8 402 aa7.18□□□□□ -1.26
NECAP1-208ENST00000545807 PDCD4Q53EL6 469 aaKnown RBP7.18□□□□□ -1.26
NECAP1-208ENST00000545807 BOLA3Q53S33 107 aa7.18□□□□□ -1.26
NECAP1-208ENST00000545807 TRMT1LQ7Z2T5 733 aaKnown RBP7.18□□□□□ -1.26
NECAP1-208ENST00000545807 TRAPPC11Q7Z392 1133 aa7.18□□□□□ -1.26
NECAP1-208ENST00000545807 PPFIBP1Q86W92 1011 aa7.18□□□□□ -1.26
NECAP1-208ENST00000545807 CPXCR1Q8N123 301 aa7.18□□□□□ -1.26
NECAP1-208ENST00000545807 TRPM4Q8TD43 1214 aa7.18□□□□□ -1.26
NECAP1-208ENST00000545807 DIS3LQ8TF46 1054 aaKnown RBP7.18□□□□□ -1.26
NECAP1-208ENST00000545807 SYMPKQ92797 1274 aaKnown RBP7.18□□□□□ -1.26
NECAP1-208ENST00000545807 SIKE1Q9BRV8 207 aa7.18□□□□□ -1.26
NECAP1-208ENST00000545807 GBA3Q9H227 469 aa7.18□□□□□ -1.26
NECAP1-208ENST00000545807 BLZF1Q9H2G9 400 aa7.18□□□□□ -1.26
NECAP1-208ENST00000545807 HOMER2Q9NSB8 354 aa7.18□□□□□ -1.26
NECAP1-208ENST00000545807 SAMSN1Q9NSI8 373 aaKnown RBP7.18□□□□□ -1.26
NECAP1-208ENST00000545807 ARHGEF38Q9NXL2 777 aa7.18□□□□□ -1.26
NECAP1-208ENST00000545807 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.18□□□□□ -1.26
NECAP1-208ENST00000545807 BARHL2Q9NY43 387 aa7.18□□□□□ -1.26
NECAP1-208ENST00000545807 RNF181Q9P0P0 153 aa7.18□□□□□ -1.26
NECAP1-208ENST00000545807 PCDHA1Q9Y5I3 950 aa7.18□□□□□ -1.26
NECAP1-208ENST00000545807 PDHA1P08559 390 aa7.17□□□□□ -1.26
NECAP1-208ENST00000545807 PYGMP11217 842 aa7.17□□□□□ -1.26
NECAP1-208ENST00000545807 CMA1P23946 247 aa7.17□□□□□ -1.26
NECAP1-208ENST00000545807 S100A5P33763 92 aa7.17□□□□□ -1.26
NECAP1-208ENST00000545807 PCK1P35558 622 aa7.17□□□□□ -1.26
NECAP1-208ENST00000545807 RCAN1P53805 252 aa7.17□□□□□ -1.26
NECAP1-208ENST00000545807 ADRM1Q16186 407 aa7.17□□□□□ -1.26
NECAP1-208ENST00000545807 QRICH1Q2TAL8 776 aa7.17□□□□□ -1.26
NECAP1-208ENST00000545807 DPCR1Q3MIW9 517 aa7.17□□□□□ -1.26
NECAP1-208ENST00000545807 ZNF569Q5MCW4 686 aa7.17□□□□□ -1.26
NECAP1-208ENST00000545807 EMBQ6PCB8 327 aa7.17□□□□□ -1.26
NECAP1-208ENST00000545807 PLPP6Q8IY26 295 aa7.17□□□□□ -1.26
NECAP1-208ENST00000545807 SLC35F6Q8N357 371 aa7.17□□□□□ -1.26
NECAP1-208ENST00000545807 RNF10Q8N5U6 811 aaKnown RBP7.17□□□□□ -1.26
NECAP1-208ENST00000545807 TBCKQ8TEA7 893 aa7.17□□□□□ -1.26
NECAP1-208ENST00000545807 FAM151AQ8WW52 585 aa7.17□□□□□ -1.26
NECAP1-208ENST00000545807 ANKS1AQ92625 1134 aa7.17□□□□□ -1.26
NECAP1-208ENST00000545807 MAELQ96JY0 434 aaKnown RBP7.17□□□□□ -1.26
NECAP1-208ENST00000545807 CCDC17Q96LX7 622 aa7.17□□□□□ -1.26
NECAP1-208ENST00000545807 CEP295NLQ96MC4 621 aa7.17□□□□□ -1.26
NECAP1-208ENST00000545807 GDAP1L1Q96MZ0 367 aa7.17□□□□□ -1.26
NECAP1-208ENST00000545807 GSDMAQ96QA5 445 aa7.17□□□□□ -1.26
NECAP1-208ENST00000545807 METTL14Q9HCE5 456 aaKnown RBP7.17□□□□□ -1.26
NECAP1-208ENST00000545807 C6orf50Q9HD87 102 aa7.17□□□□□ -1.26
NECAP1-208ENST00000545807 FAIMQ9NVQ4 179 aa7.17□□□□□ -1.26
NECAP1-208ENST00000545807 SLC12A6Q9UHW9 1150 aa7.17□□□□□ -1.26
NECAP1-208ENST00000545807 FBXO2Q9UK22 296 aaPredicted RBP7.17□□□□□ -1.26
NECAP1-208ENST00000545807 TTC7AQ9ULT0 858 aaPredicted RBP7.17□□□□□ -1.26
NECAP1-208ENST00000545807 HSF2BPO75031 334 aa7.17□□□□□ -1.26
NECAP1-208ENST00000545807 ENTPD3O75355 529 aa7.17□□□□□ -1.26
NECAP1-208ENST00000545807 CALML3P27482 149 aa7.17□□□□□ -1.26
NECAP1-208ENST00000545807 TNFRSF8P28908 595 aa7.17□□□□□ -1.26
NECAP1-208ENST00000545807 TXKP42681 527 aa7.17□□□□□ -1.26
NECAP1-208ENST00000545807 PEX5P50542 639 aa7.17□□□□□ -1.26
NECAP1-208ENST00000545807 MRPS25P82663 173 aaKnown RBP7.17□□□□□ -1.26
NECAP1-208ENST00000545807 GOLGA8FQ08AF8 430 aa7.17□□□□□ -1.26
NECAP1-208ENST00000545807 GOLGA8DPQ0D2H9 430 aa7.17□□□□□ -1.26
NECAP1-208ENST00000545807 DEPDC1Q5TB30 811 aa7.17□□□□□ -1.26
NECAP1-208ENST00000545807 TMEM179Q6ZVK1 233 aa7.17□□□□□ -1.26
NECAP1-208ENST00000545807 SND1Q7KZF4 910 aaKnown RBP eCLIP7.17□□□□□ -1.26
NECAP1-208ENST00000545807 TBC1D1Q86TI0 1168 aaPredicted RBP7.17□□□□□ -1.26
NECAP1-208ENST00000545807 GRAMD2AQ8IUY3 354 aa7.17□□□□□ -1.26
NECAP1-208ENST00000545807 GSPT2Q8IYD1 628 aaKnown RBP7.17□□□□□ -1.26
NECAP1-208ENST00000545807 LSMEM2Q8N112 164 aa7.17□□□□□ -1.26
NECAP1-208ENST00000545807 REXO1Q8N1G1 1221 aaKnown RBP7.17□□□□□ -1.26
NECAP1-208ENST00000545807 TSEN2Q8NCE0 465 aaKnown RBP7.17□□□□□ -1.26
NECAP1-208ENST00000545807 CFAP61Q8NHU2 1237 aa7.17□□□□□ -1.26
NECAP1-208ENST00000545807 ACMSDQ8TDX5 336 aa7.17□□□□□ -1.26
NECAP1-208ENST00000545807 DPF2Q92785 391 aa7.17□□□□□ -1.26
NECAP1-208ENST00000545807 SGIP1Q9BQI5 828 aa7.17□□□□□ -1.26
NECAP1-208ENST00000545807 ZNF341Q9BYN7 854 aa7.17□□□□□ -1.26
NECAP1-208ENST00000545807 DRC3Q9H069 523 aa7.17□□□□□ -1.26
NECAP1-208ENST00000545807 DEFB129Q9H1M3 183 aa7.17□□□□□ -1.26
NECAP1-208ENST00000545807 ETNK2Q9NVF9 386 aa7.17□□□□□ -1.26
NECAP1-208ENST00000545807 TSKSQ9UJT2 592 aa7.17□□□□□ -1.26
NECAP1-208ENST00000545807 CD2APQ9Y5K6 639 aa7.17□□□□□ -1.26
NECAP1-208ENST00000545807 MAST2Q6P0Q8 1798 aa7.17□□□□□ -1.26
NECAP1-208ENST00000545807 MYO3BQ8WXR4 1341 aa7.17□□□□□ -1.26
NECAP1-208ENST00000545807 A0A087X0B3 334 aa7.16□□□□□ -1.26
NECAP1-208ENST00000545807 H7C1D1 291 aa7.16□□□□□ -1.26
NECAP1-208ENST00000545807 FBXO21O94952 628 aa7.16□□□□□ -1.26
NECAP1-208ENST00000545807 TDP2O95551 362 aa7.16□□□□□ -1.26
NECAP1-208ENST00000545807 CPA3P15088 417 aa7.16□□□□□ -1.26
NECAP1-208ENST00000545807 SERPINB4P48594 390 aa7.16□□□□□ -1.26
NECAP1-208ENST00000545807 ITIH4Q14624 930 aa7.16□□□□□ -1.26
NECAP1-208ENST00000545807 GKAP1Q5VSY0 366 aaPredicted RBP7.16□□□□□ -1.26
NECAP1-208ENST00000545807 KAZNQ674X7 775 aa7.16□□□□□ -1.26
NECAP1-208ENST00000545807 SMYD4Q8IYR2 804 aaPredicted RBP7.16□□□□□ -1.26
NECAP1-208ENST00000545807 IQCKQ8N0W5 287 aa7.16□□□□□ -1.26
NECAP1-208ENST00000545807 ARFGAP2Q8N6H7 521 aa7.16□□□□□ -1.26
NECAP1-208ENST00000545807 AGBL3Q8NEM8 1001 aa7.16□□□□□ -1.26
NECAP1-208ENST00000545807 ITPKCQ96DU7 683 aa7.16□□□□□ -1.26
NECAP1-208ENST00000545807 MPP4Q96JB8 637 aa7.16□□□□□ -1.26
NECAP1-208ENST00000545807 DESI2Q9BSY9 194 aa7.16□□□□□ -1.26
NECAP1-208ENST00000545807 FANCLQ9NW38 375 aa7.16□□□□□ -1.26
NECAP1-208ENST00000545807 ZBTB21Q9ULJ3 1066 aa7.16□□□□□ -1.26
NECAP1-208ENST00000545807 CNTNAP1P78357 1384 aa7.16□□□□□ -1.26
NECAP1-208ENST00000545807 IGKV6D-41A0A0C4DH26 115 aa7.16□□□□□ -1.26
NECAP1-208ENST00000545807 SKIP12755 728 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms