RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 C9IYK1 514 aa17.87■□□□□ 0.45
LIMS2-217ENST00000545738 EIF3DO15371 548 aaKnown RBP eCLIP17.87■□□□□ 0.45
LIMS2-217ENST00000545738 PIGRP01833 764 aa17.87■□□□□ 0.45
LIMS2-217ENST00000545738 PFKMP08237 780 aa17.87■□□□□ 0.45
LIMS2-217ENST00000545738 PRCPP42785 496 aa17.87■□□□□ 0.45
LIMS2-217ENST00000545738 WDR5P61964 334 aaKnown RBP17.87■□□□□ 0.45
LIMS2-217ENST00000545738 PSMD2Q13200 908 aa17.87■□□□□ 0.45
LIMS2-217ENST00000545738 SHHQ15465 462 aa17.87■□□□□ 0.45
LIMS2-217ENST00000545738 CCDC183Q5T5S1 534 aa17.87■□□□□ 0.45
LIMS2-217ENST00000545738 ZNF658Q5TYW1 1059 aaPredicted RBP17.87■□□□□ 0.45
LIMS2-217ENST00000545738 ATF7IP2Q5U623 682 aa17.87■□□□□ 0.45
LIMS2-217ENST00000545738 CEP120Q8N960 986 aa17.87■□□□□ 0.45
LIMS2-217ENST00000545738 APBB2Q92870 758 aa17.87■□□□□ 0.45
LIMS2-217ENST00000545738 RGS18Q9NS28 235 aa17.87■□□□□ 0.45
LIMS2-217ENST00000545738 HES2Q9Y543 173 aa17.87■□□□□ 0.45
LIMS2-217ENST00000545738 STRN3Q13033 797 aa17.86■□□□□ 0.45
LIMS2-217ENST00000545738 PCBP1Q15365 356 aaKnown RBP eCLIP17.86■□□□□ 0.452e-6■■■■■ 32.7
LIMS2-217ENST00000545738 RASIP1Q5U651 963 aa17.86■□□□□ 0.45
LIMS2-217ENST00000545738 SMG8Q8ND04 991 aaKnown RBP17.86■□□□□ 0.45
LIMS2-217ENST00000545738 MRPL4Q9BYD3 311 aaKnown RBP17.86■□□□□ 0.45
LIMS2-217ENST00000545738 CXCL16Q9H2A7 254 aa17.86■□□□□ 0.45
LIMS2-217ENST00000545738 KCTD10Q9H3F6 313 aa17.86■□□□□ 0.45
LIMS2-217ENST00000545738 KCNG1Q9UIX4 513 aa17.86■□□□□ 0.45
LIMS2-217ENST00000545738 PCDHB13Q9Y5F0 798 aa17.86■□□□□ 0.45
LIMS2-217ENST00000545738 H0YCG3 227 aa17.86■□□□□ 0.45
LIMS2-217ENST00000545738 HNRNPDLO14979 420 aaKnown RBP17.86■□□□□ 0.45
LIMS2-217ENST00000545738 MEFVO15553 781 aaPredicted RBP17.86■□□□□ 0.45
LIMS2-217ENST00000545738 FAM189A1O60320 539 aa17.86■□□□□ 0.45
LIMS2-217ENST00000545738 FGBP02675 491 aa17.86■□□□□ 0.45
LIMS2-217ENST00000545738 ZBTB41Q5SVQ8 909 aa17.86■□□□□ 0.45
LIMS2-217ENST00000545738 TWF2Q6IBS0 349 aaKnown RBP17.86■□□□□ 0.45
LIMS2-217ENST00000545738 FAM109BQ6ICB4 259 aaPredicted RBP17.86■□□□□ 0.45
LIMS2-217ENST00000545738 NOTUMQ6P988 496 aa17.86■□□□□ 0.45
LIMS2-217ENST00000545738 TMEM192Q8IY95 271 aa17.86■□□□□ 0.45
LIMS2-217ENST00000545738 SLC17A8Q8NDX2 589 aa17.86■□□□□ 0.45
LIMS2-217ENST00000545738 HVCN1Q96D96 273 aa17.86■□□□□ 0.45
LIMS2-217ENST00000545738 CDT1Q9H211 546 aa17.86■□□□□ 0.45
LIMS2-217ENST00000545738 RNF39Q9H2S5 420 aa17.86■□□□□ 0.45
LIMS2-217ENST00000545738 NXF3Q9H4D5 531 aaKnown RBP17.86■□□□□ 0.45
LIMS2-217ENST00000545738 ANKFY1Q9P2R3 1169 aa17.86■□□□□ 0.45
LIMS2-217ENST00000545738 TNFSF13BQ9Y275 285 aa17.86■□□□□ 0.45
LIMS2-217ENST00000545738 PPP1R3GB7ZBB8 358 aa17.85■□□□□ 0.45
LIMS2-217ENST00000545738 NPTXRO95502 500 aa17.85■□□□□ 0.45
LIMS2-217ENST00000545738 IBSPP21815 317 aaPredicted RBP17.85■□□□□ 0.45
LIMS2-217ENST00000545738 PMS1P54277 932 aaKnown RBP17.85■□□□□ 0.45
LIMS2-217ENST00000545738 IKBKEQ14164 716 aa17.85■□□□□ 0.45
LIMS2-217ENST00000545738 DPCR1Q3MIW9 517 aa17.85■□□□□ 0.45
LIMS2-217ENST00000545738 SEZ6Q53EL9 994 aa17.85■□□□□ 0.45
LIMS2-217ENST00000545738 PSRC1Q6PGN9 363 aaPredicted RBP17.85■□□□□ 0.45
LIMS2-217ENST00000545738 ZPBP2Q6X784 338 aa17.85■□□□□ 0.45
LIMS2-217ENST00000545738 ZBTB33Q86T24 672 aa17.85■□□□□ 0.45
LIMS2-217ENST00000545738 HERVK_113Q902F9 699 aa17.85■□□□□ 0.45
LIMS2-217ENST00000545738 LPPQ93052 612 aa17.85■□□□□ 0.45
LIMS2-217ENST00000545738 ACCSQ96QU6 501 aa17.85■□□□□ 0.45
LIMS2-217ENST00000545738 CBWD1Q9BRT8 395 aa17.85■□□□□ 0.45
LIMS2-217ENST00000545738 FTHL17Q9BXU8 183 aa17.85■□□□□ 0.45
LIMS2-217ENST00000545738 CHST12Q9NRB3 414 aa17.85■□□□□ 0.45
LIMS2-217ENST00000545738 FAM105AQ9NUU6 356 aa17.85■□□□□ 0.45
LIMS2-217ENST00000545738 RMND1Q9NWS8 449 aa17.85■□□□□ 0.45
LIMS2-217ENST00000545738 ABHD14A-ACY1A0A1B0GW23 586 aa17.84■□□□□ 0.45
LIMS2-217ENST00000545738 TOM1L1O75674 476 aa17.84■□□□□ 0.45
LIMS2-217ENST00000545738 AXLP30530 894 aa17.84■□□□□ 0.45
LIMS2-217ENST00000545738 ALCAMQ13740 583 aa17.84■□□□□ 0.45
LIMS2-217ENST00000545738 SLC27A1Q6PCB7 646 aa17.84■□□□□ 0.45
LIMS2-217ENST00000545738 ZNF598Q86UK7 904 aaKnown RBP17.84■□□□□ 0.45
LIMS2-217ENST00000545738 MYOCDQ8IZQ8 938 aa17.84■□□□□ 0.45
LIMS2-217ENST00000545738 ADSSL1Q8N142 457 aa17.84■□□□□ 0.45
LIMS2-217ENST00000545738 BICD1Q96G01 975 aa17.84■□□□□ 0.45
LIMS2-217ENST00000545738 MED15Q96RN5 788 aa17.84■□□□□ 0.45
LIMS2-217ENST00000545738 TRAIPQ9BWF2 469 aa17.84■□□□□ 0.45
LIMS2-217ENST00000545738 UBE2OQ9C0C9 1292 aaKnown RBP17.84■□□□□ 0.45
LIMS2-217ENST00000545738 SEMA6BQ9H3T3 888 aa17.84■□□□□ 0.45
LIMS2-217ENST00000545738 STYXL1Q9Y6J8 313 aa17.84■□□□□ 0.45
LIMS2-217ENST00000545738 TRIP11Q15643 1979 aa17.84■□□□□ 0.45
LIMS2-217ENST00000545738 GBF1Q92538 1859 aa17.84■□□□□ 0.45
LIMS2-217ENST00000545738 TRIOBPQ9H2D6 2365 aa17.84■□□□□ 0.45
LIMS2-217ENST00000545738 A0A0U1RQF3 1178 aa17.84■□□□□ 0.45
LIMS2-217ENST00000545738 HARSP12081 509 aaKnown RBP17.84■□□□□ 0.45
LIMS2-217ENST00000545738 ZSCAN20P17040 1043 aaPredicted RBP17.84■□□□□ 0.45
LIMS2-217ENST00000545738 LIG4P49917 911 aa17.84■□□□□ 0.45
LIMS2-217ENST00000545738 AFF1P51825 1210 aaKnown RBP17.84■□□□□ 0.45
LIMS2-217ENST00000545738 FAM189BP81408 668 aa17.84■□□□□ 0.45
LIMS2-217ENST00000545738 KNOP1Q1ED39 458 aaKnown RBP17.84■□□□□ 0.45
LIMS2-217ENST00000545738 ZCWPW2Q504Y3 356 aa17.84■□□□□ 0.45
LIMS2-217ENST00000545738 MPZL3Q6UWV2 235 aa17.84■□□□□ 0.45
LIMS2-217ENST00000545738 CHRDL2Q6WN34 429 aa17.84■□□□□ 0.45
LIMS2-217ENST00000545738 ECHDC2Q86YB7 292 aa17.84■□□□□ 0.45
LIMS2-217ENST00000545738 GUF1Q8N442 669 aaKnown RBP17.84■□□□□ 0.45
LIMS2-217ENST00000545738 RNF19AQ9NV58 838 aa17.84■□□□□ 0.45
LIMS2-217ENST00000545738 IPPQ9Y573 584 aa17.84■□□□□ 0.45
LIMS2-217ENST00000545738 PCDHB2Q9Y5E7 798 aa17.84■□□□□ 0.45
LIMS2-217ENST00000545738 UBE4BO95155 1302 aa17.83■□□□□ 0.44
LIMS2-217ENST00000545738 A0A0B4J269 797 aa17.83■□□□□ 0.44
LIMS2-217ENST00000545738 TRIM49BA6NDI0 452 aa17.83■□□□□ 0.44
LIMS2-217ENST00000545738 ZBBXA8MT70 800 aa17.83■□□□□ 0.44
LIMS2-217ENST00000545738 BAIAP3O94812 1187 aa17.83■□□□□ 0.44
LIMS2-217ENST00000545738 TNFSF9P41273 254 aa17.83■□□□□ 0.44
LIMS2-217ENST00000545738 GATMP50440 423 aa17.83■□□□□ 0.44
LIMS2-217ENST00000545738 MCL1Q07820 350 aa17.83■□□□□ 0.44
LIMS2-217ENST00000545738 ZNF568Q3ZCX4 644 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms